RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 THRAP3Q9Y2W1 955 aaKnown RBP24.55■■□□□ 1.52
COPS7A-202ENST00000455113 TOM1L2Q6ZVM7 507 aa24.55■■□□□ 1.52
COPS7A-202ENST00000455113 NFAT5O94916 1531 aa24.55■■□□□ 1.52
COPS7A-202ENST00000455113 CSB-PGBD3P0DP91 1061 aa24.54■■□□□ 1.52
COPS7A-202ENST00000455113 CRB1P82279 1406 aa24.54■■□□□ 1.52
COPS7A-202ENST00000455113 BARGINQ6ZT62 677 aa24.53■■□□□ 1.52
COPS7A-202ENST00000455113 CCDC125Q86Z20 511 aa24.53■■□□□ 1.52
COPS7A-202ENST00000455113 OVOS2A0A0J9YW53 1432 aa24.53■■□□□ 1.52
COPS7A-202ENST00000455113 OVOS2Q6IE36 1432 aa24.53■■□□□ 1.52
COPS7A-202ENST00000455113 AXIN2Q9Y2T1 843 aa24.52■■□□□ 1.52
COPS7A-202ENST00000455113 COL18A1P39060 1754 aa24.52■■□□□ 1.52
COPS7A-202ENST00000455113 WDR17Q8IZU2 1322 aa24.51■■□□□ 1.51
COPS7A-202ENST00000455113 ABCC6O95255 1503 aa24.51■■□□□ 1.51
COPS7A-202ENST00000455113 MYOM1P52179 1685 aa24.5■■□□□ 1.51
COPS7A-202ENST00000455113 LTN1O94822 1766 aa24.5■■□□□ 1.51
COPS7A-202ENST00000455113 SF3B2Q13435 895 aaKnown RBP24.49■■□□□ 1.51
COPS7A-202ENST00000455113 RGPD5Q99666 1765 aa24.49■■□□□ 1.51
COPS7A-202ENST00000455113 THSD7AQ9UPZ6 1657 aa24.49■■□□□ 1.51
COPS7A-202ENST00000455113 FYB1O15117 783 aa24.48■■□□□ 1.51
COPS7A-202ENST00000455113 GGNBP2Q9H3C7 697 aa24.48■■□□□ 1.51
COPS7A-202ENST00000455113 PDE3BQ13370 1112 aa24.47■■□□□ 1.51
COPS7A-202ENST00000455113 NSD3Q9BZ95 1437 aa24.46■■□□□ 1.51
COPS7A-202ENST00000455113 KIF20BQ96Q89 1820 aa24.45■■□□□ 1.5
COPS7A-202ENST00000455113 BLMP54132 1417 aaPredicted RBP24.44■■□□□ 1.5
COPS7A-202ENST00000455113 AMPHP49418 695 aa24.44■■□□□ 1.5
COPS7A-202ENST00000455113 CGNL1Q0VF96 1302 aa24.43■■□□□ 1.5
COPS7A-202ENST00000455113 EP400Q96L91 3159 aa24.43■■□□□ 1.5
COPS7A-202ENST00000455113 CDCA7Q9BWT1 371 aaPredicted RBP24.43■■□□□ 1.5
COPS7A-202ENST00000455113 CARD10Q9BWT7 1032 aa24.43■■□□□ 1.5
COPS7A-202ENST00000455113 CARD14Q9BXL6 1004 aa24.43■■□□□ 1.5
COPS7A-202ENST00000455113 ERBB3P21860 1342 aa24.42■■□□□ 1.5
COPS7A-202ENST00000455113 IP6K1Q92551 441 aa24.41■■□□□ 1.5
COPS7A-202ENST00000455113 CCDC7Q96M83 1385 aa24.41■■□□□ 1.5
COPS7A-202ENST00000455113 NLRP2Q9NX02 1062 aa24.41■■□□□ 1.5
COPS7A-202ENST00000455113 FAM182BQ5T319 152 aa24.4■■□□□ 1.5
COPS7A-202ENST00000455113 FAM196AQ6ZSG2 479 aa24.4■■□□□ 1.5
COPS7A-202ENST00000455113 ANKRD24Q8TF21 1146 aa24.4■■□□□ 1.5
COPS7A-202ENST00000455113 DDB1Q16531 1140 aa24.39■■□□□ 1.5
COPS7A-202ENST00000455113 MAP3K19Q56UN5 1328 aa24.39■■□□□ 1.49
COPS7A-202ENST00000455113 PARP4Q9UKK3 1724 aaKnown RBP24.38■■□□□ 1.49
COPS7A-202ENST00000455113 ZNF316A6NFI3 1004 aaPredicted RBP24.37■■□□□ 1.49
COPS7A-202ENST00000455113 PANK3Q9H999 370 aa24.37■■□□□ 1.49
COPS7A-202ENST00000455113 C11orf95C9JLR9 678 aaPredicted RBP24.36■■□□□ 1.49
COPS7A-202ENST00000455113 FBLN1P23142 703 aa24.36■■□□□ 1.49
COPS7A-202ENST00000455113 HOXC9P31274 260 aa24.36■■□□□ 1.49
COPS7A-202ENST00000455113 RRS1Q15050 365 aaKnown RBP24.36■■□□□ 1.49
COPS7A-202ENST00000455113 LTV1Q96GA3 475 aaPredicted RBP24.35■■□□□ 1.49
COPS7A-202ENST00000455113 RTL1A6NKG5 1358 aa24.35■■□□□ 1.49
COPS7A-202ENST00000455113 BAG6P46379 1132 aa24.34■■□□□ 1.49
COPS7A-202ENST00000455113 WNK3Q9BYP7 1800 aa24.33■■□□□ 1.49
COPS7A-202ENST00000455113 EXOC5O00471 708 aa24.32■■□□□ 1.48
COPS7A-202ENST00000455113 KIF7Q2M1P5 1343 aa24.32■■□□□ 1.48
COPS7A-202ENST00000455113 SMG6Q86US8 1419 aaKnown RBP24.32■■□□□ 1.48
COPS7A-202ENST00000455113 FAM208AQ9UK61 1670 aaKnown RBP24.32■■□□□ 1.48
COPS7A-202ENST00000455113 RGPD1P0DJD0 1748 aa24.32■■□□□ 1.48
COPS7A-202ENST00000455113 KNSTRNQ9Y448 316 aa24.31■■□□□ 1.48
COPS7A-202ENST00000455113 LRRC37A3O60309 1634 aa24.31■■□□□ 1.48
COPS7A-202ENST00000455113 IL2RBP14784 551 aa24.3■■□□□ 1.48
COPS7A-202ENST00000455113 KIF24Q5T7B8 1368 aa24.3■■□□□ 1.48
COPS7A-202ENST00000455113 TRIM37O94972 964 aa24.3■■□□□ 1.48
COPS7A-202ENST00000455113 DEFB132Q7Z7B7 95 aa24.3■■□□□ 1.48
COPS7A-202ENST00000455113 OVOS2A0A0G2JMS6 1433 aa24.29■■□□□ 1.48
COPS7A-202ENST00000455113 FLT4P35916 1363 aa24.29■■□□□ 1.48
COPS7A-202ENST00000455113 PPM1GO15355 546 aaPredicted RBP24.28■■□□□ 1.48
COPS7A-202ENST00000455113 DISP2A7MBM2 1401 aa24.27■■□□□ 1.48
COPS7A-202ENST00000455113 NSD2O96028 1365 aa24.27■■□□□ 1.48
COPS7A-202ENST00000455113 ANKRD26Q9UPS8 1709 aa24.25■■□□□ 1.47
COPS7A-202ENST00000455113 INSRP06213 1382 aa24.24■■□□□ 1.47
COPS7A-202ENST00000455113 MAP2P11137 1827 aaKnown RBP24.24■■□□□ 1.47
COPS7A-202ENST00000455113 TNNT2P45379 298 aaPredicted RBP24.24■■□□□ 1.47
COPS7A-202ENST00000455113 HSP90AB2PQ58FF8 381 aa24.24■■□□□ 1.47
COPS7A-202ENST00000455113 EMILIN1Q9Y6C2 1016 aa24.24■■□□□ 1.47
COPS7A-202ENST00000455113 APBA3O96018 575 aa24.23■■□□□ 1.47
COPS7A-202ENST00000455113 TNS2Q63HR2 1409 aa24.22■■□□□ 1.47
COPS7A-202ENST00000455113 EN1Q05925 392 aaPredicted RBP24.21■■□□□ 1.47
COPS7A-202ENST00000455113 MORC1Q86VD1 984 aa24.21■■□□□ 1.47
COPS7A-202ENST00000455113 MARCH10Q8NA82 808 aaPredicted RBP24.21■■□□□ 1.47
COPS7A-202ENST00000455113 TNS1Q9HBL0 1735 aaKnown RBP24.2■■□□□ 1.46
COPS7A-202ENST00000455113 PEAK1Q9H792 1746 aa24.19■■□□□ 1.46
COPS7A-202ENST00000455113 NBPF6Q5VWK0 638 aa24.18■■□□□ 1.46
COPS7A-202ENST00000455113 NBPF4Q96M43 638 aa24.18■■□□□ 1.46
COPS7A-202ENST00000455113 POLKQ9UBT6 870 aa24.18■■□□□ 1.46
COPS7A-202ENST00000455113 RGPD2P0DJD1 1756 aa24.18■■□□□ 1.46
COPS7A-202ENST00000455113 RAPGEF4Q8WZA2 1011 aa24.18■■□□□ 1.46
COPS7A-202ENST00000455113 WASHC2AQ641Q2 1341 aa24.18■■□□□ 1.46
COPS7A-202ENST00000455113 BCL9O00512 1426 aa24.16■■□□□ 1.46
COPS7A-202ENST00000455113 SBF2Q86WG5 1849 aa24.15■■□□□ 1.46
COPS7A-202ENST00000455113 USHBP1Q8N6Y0 703 aa24.15■■□□□ 1.46
COPS7A-202ENST00000455113 BCL11BQ9C0K0 894 aaPredicted RBP24.15■■□□□ 1.46
COPS7A-202ENST00000455113 PARD3Q8TEW0 1356 aa24.15■■□□□ 1.46
COPS7A-202ENST00000455113 EZH2Q15910 746 aaKnown RBP24.14■■□□□ 1.45
COPS7A-202ENST00000455113 DDX54Q8TDD1 881 aaKnown RBP24.14■■□□□ 1.45
COPS7A-202ENST00000455113 TATP17735 454 aaPredicted RBP24.13■■□□□ 1.45
COPS7A-202ENST00000455113 ZCRB1Q8TBF4 217 aaKnown RBP24.13■■□□□ 1.45
COPS7A-202ENST00000455113 AMER1Q5JTC6 1135 aaPredicted RBP24.12■■□□□ 1.45
COPS7A-202ENST00000455113 CAMKK2Q96RR4 588 aa24.12■■□□□ 1.45
COPS7A-202ENST00000455113 KAT6BQ8WYB5 2073 aa24.12■■□□□ 1.45
COPS7A-202ENST00000455113 PER1O15534 1290 aaPredicted RBP24.1■■□□□ 1.45
COPS7A-202ENST00000455113 MEGF6O75095 1541 aa24.09■■□□□ 1.45
COPS7A-202ENST00000455113 PLSCR1O15162 318 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms