RNA–Protein interactions for RNA: ENST00000454568.1

RFC3P1-201, Transcript of replication factor C 3 pseudogene 1, humanhuman

BASIC

Gene RFC3P1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P1-201ENST00000454568 PIP4K2BP78356 416 aa12.96□□□□□ -0.33
RFC3P1-201ENST00000454568 TJAP1Q5JTD0 557 aa12.96□□□□□ -0.33
RFC3P1-201ENST00000454568 PNMA3Q9UL41 463 aa12.96□□□□□ -0.33
RFC3P1-201ENST00000454568 EFCAB6Q5THR3 1501 aa12.96□□□□□ -0.33
RFC3P1-201ENST00000454568 SMAPO00193 183 aa12.95□□□□□ -0.34
RFC3P1-201ENST00000454568 TMEM2Q9UHN6 1383 aa12.94□□□□□ -0.34
RFC3P1-201ENST00000454568 SLIT1O75093 1534 aa12.94□□□□□ -0.34
RFC3P1-201ENST00000454568 RPRD2Q5VT52 1461 aaKnown RBP12.93□□□□□ -0.34
RFC3P1-201ENST00000454568 ARHGAP23Q9P227 1491 aa12.93□□□□□ -0.34
RFC3P1-201ENST00000454568 NOS1P29475 1434 aa12.93□□□□□ -0.34
RFC3P1-201ENST00000454568 SYNMO15061 1565 aa12.93□□□□□ -0.34
RFC3P1-201ENST00000454568 NUP155O75694 1391 aa12.93□□□□□ -0.34
RFC3P1-201ENST00000454568 TET3O43151 1660 aa12.93□□□□□ -0.34
RFC3P1-201ENST00000454568 GFRA3O60609 400 aa12.92□□□□□ -0.34
RFC3P1-201ENST00000454568 MTRQ99707 1265 aa12.92□□□□□ -0.34
RFC3P1-201ENST00000454568 DISP3Q9P2K9 1392 aa12.92□□□□□ -0.34
RFC3P1-201ENST00000454568 UNC13BO14795 1591 aa12.91□□□□□ -0.34
RFC3P1-201ENST00000454568 PPP1R15AO75807 674 aaPredicted RBP12.91□□□□□ -0.34
RFC3P1-201ENST00000454568 FAM198AQ9UFP1 575 aa12.91□□□□□ -0.34
RFC3P1-201ENST00000454568 KDM5AP29375 1690 aaKnown RBP12.91□□□□□ -0.34
RFC3P1-201ENST00000454568 GCC2Q8IWJ2 1684 aa12.91□□□□□ -0.34
RFC3P1-201ENST00000454568 ADGRB3O60242 1522 aa12.9□□□□□ -0.34
RFC3P1-201ENST00000454568 SLC26A8Q96RN1 970 aa12.9□□□□□ -0.34
RFC3P1-201ENST00000454568 PRKD2Q9BZL6 878 aa12.9□□□□□ -0.34
RFC3P1-201ENST00000454568 V9GY48 417 aaPredicted RBP12.9□□□□□ -0.34
RFC3P1-201ENST00000454568 RNF40O75150 1001 aa12.89□□□□□ -0.35
RFC3P1-201ENST00000454568 SLC4A3P48751 1232 aa12.89□□□□□ -0.35
RFC3P1-201ENST00000454568 NUDT18Q6ZVK8 323 aa12.88□□□□□ -0.35
RFC3P1-201ENST00000454568 STRCP1A6NGW2 1772 aa12.88□□□□□ -0.35
RFC3P1-201ENST00000454568 IQGAP3Q86VI3 1631 aa12.88□□□□□ -0.35
RFC3P1-201ENST00000454568 LRRC7Q96NW7 1537 aa12.88□□□□□ -0.35
RFC3P1-201ENST00000454568 RRBP1Q9P2E9 1410 aaKnown RBP12.88□□□□□ -0.35
RFC3P1-201ENST00000454568 E9PCH4 1651 aa12.87□□□□□ -0.35
RFC3P1-201ENST00000454568 OSBPP22059 807 aa12.87□□□□□ -0.35
RFC3P1-201ENST00000454568 PPP1R18Q6NYC8 613 aa12.87□□□□□ -0.35
RFC3P1-201ENST00000454568 TRAF7Q6Q0C0 670 aa12.87□□□□□ -0.35
RFC3P1-201ENST00000454568 NRG2O14511 850 aaPredicted RBP12.86□□□□□ -0.35
RFC3P1-201ENST00000454568 HSPA1LP34931 641 aa12.86□□□□□ -0.35
RFC3P1-201ENST00000454568 GGCXP38435 758 aa12.86□□□□□ -0.35
RFC3P1-201ENST00000454568 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.86□□□□□ -0.35
RFC3P1-201ENST00000454568 MYO5BQ9ULV0 1848 aa12.85□□□□□ -0.35
RFC3P1-201ENST00000454568 KCNA6P17658 529 aa12.85□□□□□ -0.35
RFC3P1-201ENST00000454568 PRIM1P49642 420 aaKnown RBP12.85□□□□□ -0.35
RFC3P1-201ENST00000454568 NUTM2DQ5VT03 806 aaPredicted RBP12.85□□□□□ -0.35
RFC3P1-201ENST00000454568 PROSER2Q86WR7 435 aaPredicted RBP12.85□□□□□ -0.35
RFC3P1-201ENST00000454568 SLF2Q8IX21 1173 aa12.85□□□□□ -0.35
RFC3P1-201ENST00000454568 TRIM52Q96A61 297 aa12.85□□□□□ -0.35
RFC3P1-201ENST00000454568 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.85□□□□□ -0.35
RFC3P1-201ENST00000454568 RIMS2Q9UQ26 1411 aa12.85□□□□□ -0.35
RFC3P1-201ENST00000454568 TMEM131LA2VDJ0 1609 aa12.83□□□□□ -0.36
RFC3P1-201ENST00000454568 C3orf80F5H4A9 247 aa12.82□□□□□ -0.36
RFC3P1-201ENST00000454568 ZNF326Q5BKZ1 582 aaKnown RBP12.82□□□□□ -0.36
RFC3P1-201ENST00000454568 CDHR5Q9HBB8 845 aa12.82□□□□□ -0.36
RFC3P1-201ENST00000454568 PLEKHG1Q9ULL1 1385 aa12.81□□□□□ -0.36
RFC3P1-201ENST00000454568 NAIPQ13075 1403 aa12.81□□□□□ -0.36
RFC3P1-201ENST00000454568 APLP1P51693 650 aa12.81□□□□□ -0.36
RFC3P1-201ENST00000454568 PRR14Q9BWN1 585 aa12.81□□□□□ -0.36
RFC3P1-201ENST00000454568 TMEM94Q12767 1356 aa12.81□□□□□ -0.36
RFC3P1-201ENST00000454568 ZFYVE9O95405 1425 aa12.8□□□□□ -0.36
RFC3P1-201ENST00000454568 C14orf37Q86TY3 774 aa12.79□□□□□ -0.36
RFC3P1-201ENST00000454568 TTC13Q8NBP0 860 aa12.79□□□□□ -0.36
RFC3P1-201ENST00000454568 ZNF516Q92618 1163 aa12.79□□□□□ -0.36
RFC3P1-201ENST00000454568 CFAP44Q96MT7 982 aa12.79□□□□□ -0.36
RFC3P1-201ENST00000454568 TBX22Q9Y458 520 aa12.79□□□□□ -0.36
RFC3P1-201ENST00000454568 SPHKAPQ2M3C7 1700 aa12.79□□□□□ -0.36
RFC3P1-201ENST00000454568 PAXIP1Q6ZW49 1069 aaPredicted RBP12.78□□□□□ -0.36
RFC3P1-201ENST00000454568 TMUB1Q9BVT8 246 aa12.78□□□□□ -0.36
RFC3P1-201ENST00000454568 XIRP1Q702N8 1843 aaKnown RBP12.78□□□□□ -0.36
RFC3P1-201ENST00000454568 SWT1Q5T5J6 900 aaKnown RBP12.77□□□□□ -0.37
RFC3P1-201ENST00000454568 ILDR2Q71H61 639 aa12.77□□□□□ -0.37
RFC3P1-201ENST00000454568 ALKQ9UM73 1620 aa12.77□□□□□ -0.37
RFC3P1-201ENST00000454568 PADI6Q6TGC4 694 aa12.76□□□□□ -0.37
RFC3P1-201ENST00000454568 MSH6P52701 1360 aa12.76□□□□□ -0.37
RFC3P1-201ENST00000454568 HFM1A2PYH4 1435 aa12.76□□□□□ -0.37
RFC3P1-201ENST00000454568 NKTRP30414 1462 aaKnown RBP12.76□□□□□ -0.37
RFC3P1-201ENST00000454568 CHD2O14647 1828 aaKnown RBP12.75□□□□□ -0.37
RFC3P1-201ENST00000454568 NWD1Q149M9 1564 aa12.74□□□□□ -0.37
RFC3P1-201ENST00000454568 AMER1Q5JTC6 1135 aaPredicted RBP12.73□□□□□ -0.37
RFC3P1-201ENST00000454568 NPDC1Q9NQX5 325 aaPredicted RBP12.73□□□□□ -0.37
RFC3P1-201ENST00000454568 AMOTL2Q9Y2J4 779 aa12.73□□□□□ -0.37
RFC3P1-201ENST00000454568 KIF1BO60333 1816 aa12.73□□□□□ -0.37
RFC3P1-201ENST00000454568 ADAMTS13Q76LX8 1427 aa12.72□□□□□ -0.37
RFC3P1-201ENST00000454568 COPS2P61201 443 aa12.72□□□□□ -0.37
RFC3P1-201ENST00000454568 PDZRN3Q9UPQ7 1066 aa12.72□□□□□ -0.37
RFC3P1-201ENST00000454568 DIP2AQ14689 1571 aa12.72□□□□□ -0.37
RFC3P1-201ENST00000454568 FAM135BQ49AJ0 1406 aa12.71□□□□□ -0.37
RFC3P1-201ENST00000454568 PIK3R4Q99570 1358 aa12.71□□□□□ -0.37
RFC3P1-201ENST00000454568 CLTCL1P53675 1640 aa12.71□□□□□ -0.37
RFC3P1-201ENST00000454568 LCE2BO14633 110 aa12.71□□□□□ -0.37
RFC3P1-201ENST00000454568 NKX2-3Q8TAU0 364 aa12.71□□□□□ -0.37
RFC3P1-201ENST00000454568 SLAIN2Q9P270 581 aa12.71□□□□□ -0.37
RFC3P1-201ENST00000454568 TRPM2O94759 1503 aa12.71□□□□□ -0.38
RFC3P1-201ENST00000454568 MED1Q15648 1581 aaPredicted RBP12.7□□□□□ -0.38
RFC3P1-201ENST00000454568 ZPR1O75312 459 aa12.7□□□□□ -0.38
RFC3P1-201ENST00000454568 ATF3P18847 181 aa12.7□□□□□ -0.38
RFC3P1-201ENST00000454568 EYA1Q99502 592 aa12.69□□□□□ -0.38
RFC3P1-201ENST00000454568 C19orf44Q9H6X5 657 aa12.69□□□□□ -0.38
RFC3P1-201ENST00000454568 ROBO1Q9Y6N7 1651 aa12.68□□□□□ -0.38
RFC3P1-201ENST00000454568 SOCS7O14512 581 aa12.68□□□□□ -0.38
RFC3P1-201ENST00000454568 PCDHB3Q9Y5E6 796 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms