RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 C11orf95C9JLR9 678 aaPredicted RBP20.3■□□□□ 0.84
VPS16-205ENST00000453689 EVA1CP58658 441 aa20.3■□□□□ 0.84
VPS16-205ENST00000453689 CARD14Q9BXL6 1004 aa20.3■□□□□ 0.84
VPS16-205ENST00000453689 SPATA31A1Q5TZJ5 1347 aa20.29■□□□□ 0.84
VPS16-205ENST00000453689 ONECUT3O60422 494 aaPredicted RBP20.29■□□□□ 0.84
VPS16-205ENST00000453689 MAP2P11137 1827 aaKnown RBP20.28■□□□□ 0.84
VPS16-205ENST00000453689 FYB1O15117 783 aa20.28■□□□□ 0.84
VPS16-205ENST00000453689 FAM98CQ17RN3 349 aaKnown RBP20.28■□□□□ 0.84
VPS16-205ENST00000453689 LARP1Q6PKG0 1096 aaKnown RBP20.28■□□□□ 0.84
VPS16-205ENST00000453689 COG3Q96JB2 828 aa20.28■□□□□ 0.84
VPS16-205ENST00000453689 AXIN2Q9Y2T1 843 aa20.28■□□□□ 0.84
VPS16-205ENST00000453689 SEPT12Q8IYM1 358 aa20.27■□□□□ 0.84
VPS16-205ENST00000453689 PARP4Q9UKK3 1724 aaKnown RBP20.27■□□□□ 0.83
VPS16-205ENST00000453689 CRB1P82279 1406 aa20.26■□□□□ 0.83
VPS16-205ENST00000453689 RGPD2P0DJD1 1756 aa20.26■□□□□ 0.83
VPS16-205ENST00000453689 FAM208AQ9UK61 1670 aaKnown RBP20.26■□□□□ 0.83
VPS16-205ENST00000453689 GGNBP2Q9H3C7 697 aa20.25■□□□□ 0.83
VPS16-205ENST00000453689 UPF1Q92900 1129 aaKnown RBP eCLIP20.24■□□□□ 0.83
VPS16-205ENST00000453689 USP35Q9P2H5 1018 aa20.24■□□□□ 0.83
VPS16-205ENST00000453689 A0A0G2JS52 829 aa20.23■□□□□ 0.83
VPS16-205ENST00000453689 MYT1Q01538 1121 aa20.23■□□□□ 0.83
VPS16-205ENST00000453689 KIF7Q2M1P5 1343 aa20.23■□□□□ 0.83
VPS16-205ENST00000453689 WDR17Q8IZU2 1322 aa20.23■□□□□ 0.83
VPS16-205ENST00000453689 PEAK1Q9H792 1746 aa20.22■□□□□ 0.83
VPS16-205ENST00000453689 FBLN1P23142 703 aa20.21■□□□□ 0.83
VPS16-205ENST00000453689 LRRC37A3O60309 1634 aa20.2■□□□□ 0.82
VPS16-205ENST00000453689 EP400Q96L91 3159 aa20.2■□□□□ 0.82
VPS16-205ENST00000453689 BARGINQ6ZT62 677 aa20.2■□□□□ 0.82
VPS16-205ENST00000453689 TOM1L2Q6ZVM7 507 aa20.2■□□□□ 0.82
VPS16-205ENST00000453689 TCP11L2Q8N4U5 519 aa20.2■□□□□ 0.82
VPS16-205ENST00000453689 PANK3Q9H999 370 aa20.2■□□□□ 0.82
VPS16-205ENST00000453689 THRAP3Q9Y2W1 955 aaKnown RBP20.2■□□□□ 0.82
VPS16-205ENST00000453689 KRT27Q7Z3Y8 459 aa20.19■□□□□ 0.82
VPS16-205ENST00000453689 CGNL1Q0VF96 1302 aa20.19■□□□□ 0.82
VPS16-205ENST00000453689 MAP3K19Q56UN5 1328 aa20.19■□□□□ 0.82
VPS16-205ENST00000453689 BLMP54132 1417 aaPredicted RBP20.19■□□□□ 0.82
VPS16-205ENST00000453689 ERBB3P21860 1342 aa20.18■□□□□ 0.82
VPS16-205ENST00000453689 CSB-PGBD3P0DP91 1061 aa20.17■□□□□ 0.82
VPS16-205ENST00000453689 RGPD1P0DJD0 1748 aa20.16■□□□□ 0.82
VPS16-205ENST00000453689 IP6K1Q92551 441 aa20.16■□□□□ 0.82
VPS16-205ENST00000453689 CCDC7Q96M83 1385 aa20.16■□□□□ 0.82
VPS16-205ENST00000453689 SBF2Q86WG5 1849 aa20.16■□□□□ 0.82
VPS16-205ENST00000453689 RRS1Q15050 365 aaKnown RBP20.15■□□□□ 0.82
VPS16-205ENST00000453689 ANKRD24Q8TF21 1146 aa20.15■□□□□ 0.82
VPS16-205ENST00000453689 CARD10Q9BWT7 1032 aa20.15■□□□□ 0.82
VPS16-205ENST00000453689 RTL1A6NKG5 1358 aa20.15■□□□□ 0.82
VPS16-205ENST00000453689 HOXC9P31274 260 aa20.14■□□□□ 0.81
VPS16-205ENST00000453689 AMPHP49418 695 aa20.14■□□□□ 0.81
VPS16-205ENST00000453689 TNS1Q9HBL0 1735 aaKnown RBP20.13■□□□□ 0.81
VPS16-205ENST00000453689 WASHC2AQ641Q2 1341 aa20.13■□□□□ 0.81
VPS16-205ENST00000453689 DISP2A7MBM2 1401 aa20.12■□□□□ 0.81
VPS16-205ENST00000453689 FAM182BQ5T319 152 aa20.11■□□□□ 0.81
VPS16-205ENST00000453689 NSD2O96028 1365 aa20.1■□□□□ 0.81
VPS16-205ENST00000453689 NLRP2Q9NX02 1062 aa20.1■□□□□ 0.81
VPS16-205ENST00000453689 KIF24Q5T7B8 1368 aa20.09■□□□□ 0.81
VPS16-205ENST00000453689 LTV1Q96GA3 475 aaPredicted RBP20.09■□□□□ 0.81
VPS16-205ENST00000453689 FLT4P35916 1363 aa20.08■□□□□ 0.81
VPS16-205ENST00000453689 PDE3BQ13370 1112 aa20.08■□□□□ 0.81
VPS16-205ENST00000453689 KNSTRNQ9Y448 316 aa20.08■□□□□ 0.81
VPS16-205ENST00000453689 EMILIN1Q9Y6C2 1016 aa20.08■□□□□ 0.81
VPS16-205ENST00000453689 CCDC125Q86Z20 511 aa20.07■□□□□ 0.8
VPS16-205ENST00000453689 CDCA7Q9BWT1 371 aaPredicted RBP20.07■□□□□ 0.8
VPS16-205ENST00000453689 SHANK3Q9BYB0 1731 aa20.07■□□□□ 0.8
VPS16-205ENST00000453689 INSRP06213 1382 aa20.07■□□□□ 0.8
VPS16-205ENST00000453689 ZNF316A6NFI3 1004 aaPredicted RBP20.06■□□□□ 0.8
VPS16-205ENST00000453689 SMG6Q86US8 1419 aaKnown RBP20.05■□□□□ 0.8
VPS16-205ENST00000453689 TNNT2P45379 298 aaPredicted RBP20.05■□□□□ 0.8
VPS16-205ENST00000453689 DDB1Q16531 1140 aa20.05■□□□□ 0.8
VPS16-205ENST00000453689 HSP90AB2PQ58FF8 381 aa20.05■□□□□ 0.8
VPS16-205ENST00000453689 KAT6BQ8WYB5 2073 aa20.04■□□□□ 0.8
VPS16-205ENST00000453689 TNS2Q63HR2 1409 aa20.04■□□□□ 0.8
VPS16-205ENST00000453689 PER1O15534 1290 aaPredicted RBP20.04■□□□□ 0.8
VPS16-205ENST00000453689 AMER1Q5JTC6 1135 aaPredicted RBP20.04■□□□□ 0.8
VPS16-205ENST00000453689 FAM196AQ6ZSG2 479 aa20.03■□□□□ 0.8
VPS16-205ENST00000453689 POLKQ9UBT6 870 aa20.03■□□□□ 0.8
VPS16-205ENST00000453689 OVOS2A0A0G2JMS6 1433 aa20.02■□□□□ 0.8
VPS16-205ENST00000453689 PPM1GO15355 546 aaPredicted RBP20.02■□□□□ 0.8
VPS16-205ENST00000453689 IL2RBP14784 551 aa20.02■□□□□ 0.8
VPS16-205ENST00000453689 MORC1Q86VD1 984 aa20.01■□□□□ 0.79
VPS16-205ENST00000453689 EXOC5O00471 708 aa20■□□□□ 0.79
VPS16-205ENST00000453689 SF3B2Q13435 895 aaKnown RBP20■□□□□ 0.79
VPS16-205ENST00000453689 NBPF6Q5VWK0 638 aa19.99■□□□□ 0.79
VPS16-205ENST00000453689 MARCH10Q8NA82 808 aaPredicted RBP19.99■□□□□ 0.79
VPS16-205ENST00000453689 NBPF4Q96M43 638 aa19.99■□□□□ 0.79
VPS16-205ENST00000453689 MEGF6O75095 1541 aa19.98■□□□□ 0.79
VPS16-205ENST00000453689 DEFB132Q7Z7B7 95 aa19.98■□□□□ 0.79
VPS16-205ENST00000453689 NHSQ6T4R5 1651 aa19.97■□□□□ 0.79
VPS16-205ENST00000453689 PKD1L3Q7Z443 1732 aa19.97■□□□□ 0.79
VPS16-205ENST00000453689 TRIM37O94972 964 aa19.97■□□□□ 0.79
VPS16-205ENST00000453689 USHBP1Q8N6Y0 703 aa19.97■□□□□ 0.79
VPS16-205ENST00000453689 NPC1L1Q9UHC9 1359 aa19.96■□□□□ 0.79
VPS16-205ENST00000453689 RGPD3A6NKT7 1758 aaPredicted RBP19.96■□□□□ 0.79
VPS16-205ENST00000453689 RGPD4Q7Z3J3 1758 aa19.96■□□□□ 0.79
VPS16-205ENST00000453689 NCAPD2Q15021 1401 aa19.96■□□□□ 0.79
VPS16-205ENST00000453689 RREB1Q92766 1687 aa19.96■□□□□ 0.79
VPS16-205ENST00000453689 BCL9O00512 1426 aa19.95■□□□□ 0.78
VPS16-205ENST00000453689 CC2D1BQ5T0F9 858 aaKnown RBP19.95■□□□□ 0.78
VPS16-205ENST00000453689 DOT1LQ8TEK3 1739 aa19.95■□□□□ 0.78
VPS16-205ENST00000453689 BAG6P46379 1132 aa19.94■□□□□ 0.78
VPS16-205ENST00000453689 BTAF1O14981 1849 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms