RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 SPATA31A7Q8IWB4 1347 aa27.35■■□□□ 1.97
PMPCB-205ENST00000453466 LARP1Q6PKG0 1096 aaKnown RBP27.34■■□□□ 1.97
PMPCB-205ENST00000453466 FBLN1P23142 703 aa27.33■■□□□ 1.97
PMPCB-205ENST00000453466 LMO7Q8WWI1 1683 aa27.33■■□□□ 1.97
PMPCB-205ENST00000453466 NRAPQ86VF7 1730 aa27.32■■□□□ 1.96
PMPCB-205ENST00000453466 AMPHP49418 695 aa27.31■■□□□ 1.96
PMPCB-205ENST00000453466 SPATA31A1Q5TZJ5 1347 aa27.31■■□□□ 1.96
PMPCB-205ENST00000453466 COL5A2P05997 1499 aaPredicted RBP27.31■■□□□ 1.96
PMPCB-205ENST00000453466 ONECUT3O60422 494 aaPredicted RBP27.31■■□□□ 1.96
PMPCB-205ENST00000453466 IP6K1Q92551 441 aa27.31■■□□□ 1.96
PMPCB-205ENST00000453466 MAP3K19Q56UN5 1328 aa27.31■■□□□ 1.96
PMPCB-205ENST00000453466 CSB-PGBD3P0DP91 1061 aa27.3■■□□□ 1.96
PMPCB-205ENST00000453466 USP35Q9P2H5 1018 aa27.3■■□□□ 1.96
PMPCB-205ENST00000453466 NSD2O96028 1365 aa27.3■■□□□ 1.96
PMPCB-205ENST00000453466 RGS12O14924 1447 aa27.29■■□□□ 1.96
PMPCB-205ENST00000453466 RRS1Q15050 365 aaKnown RBP27.29■■□□□ 1.96
PMPCB-205ENST00000453466 FAM98CQ17RN3 349 aaKnown RBP27.29■■□□□ 1.96
PMPCB-205ENST00000453466 TOM1L2Q6ZVM7 507 aa27.29■■□□□ 1.96
PMPCB-205ENST00000453466 KIF20BQ96Q89 1820 aa27.28■■□□□ 1.96
PMPCB-205ENST00000453466 GLI3P10071 1580 aa27.28■■□□□ 1.96
PMPCB-205ENST00000453466 WDR17Q8IZU2 1322 aa27.28■■□□□ 1.96
PMPCB-205ENST00000453466 SOCS7O14512 581 aa27.28■■□□□ 1.96
PMPCB-205ENST00000453466 PER1O15534 1290 aaPredicted RBP27.28■■□□□ 1.96
PMPCB-205ENST00000453466 ABCC6O95255 1503 aa27.28■■□□□ 1.96
PMPCB-205ENST00000453466 SEPT12Q8IYM1 358 aa27.27■■□□□ 1.96
PMPCB-205ENST00000453466 COL18A1P39060 1754 aa27.27■■□□□ 1.96
PMPCB-205ENST00000453466 A0A0G2JS52 829 aa27.26■■□□□ 1.96
PMPCB-205ENST00000453466 MYT1Q01538 1121 aa27.26■■□□□ 1.96
PMPCB-205ENST00000453466 TCP11L2Q8N4U5 519 aa27.26■■□□□ 1.96
PMPCB-205ENST00000453466 THRAP3Q9Y2W1 955 aaKnown RBP27.26■■□□□ 1.96
PMPCB-205ENST00000453466 CRB1P82279 1406 aa27.26■■□□□ 1.95
PMPCB-205ENST00000453466 HOXC9P31274 260 aa27.26■■□□□ 1.95
PMPCB-205ENST00000453466 MORC1Q86VD1 984 aa27.26■■□□□ 1.95
PMPCB-205ENST00000453466 AMER1Q5JTC6 1135 aaPredicted RBP27.25■■□□□ 1.95
PMPCB-205ENST00000453466 ANKRD24Q8TF21 1146 aa27.25■■□□□ 1.95
PMPCB-205ENST00000453466 BARGINQ6ZT62 677 aa27.24■■□□□ 1.95
PMPCB-205ENST00000453466 BLMP54132 1417 aaPredicted RBP27.24■■□□□ 1.95
PMPCB-205ENST00000453466 TNNT2P45379 298 aaPredicted RBP27.23■■□□□ 1.95
PMPCB-205ENST00000453466 ERBB3P21860 1342 aa27.22■■□□□ 1.95
PMPCB-205ENST00000453466 CARD10Q9BWT7 1032 aa27.22■■□□□ 1.95
PMPCB-205ENST00000453466 RTL1A6NKG5 1358 aa27.22■■□□□ 1.95
PMPCB-205ENST00000453466 MIER1Q8N108 512 aa27.21■■□□□ 1.95
PMPCB-205ENST00000453466 KIF24Q5T7B8 1368 aa27.21■■□□□ 1.95
PMPCB-205ENST00000453466 NLRP2Q9NX02 1062 aa27.21■■□□□ 1.95
PMPCB-205ENST00000453466 LTN1O94822 1766 aa27.2■■□□□ 1.94
PMPCB-205ENST00000453466 PPM1GO15355 546 aaPredicted RBP27.2■■□□□ 1.94
PMPCB-205ENST00000453466 LTV1Q96GA3 475 aaPredicted RBP27.2■■□□□ 1.94
PMPCB-205ENST00000453466 EMILIN1Q9Y6C2 1016 aa27.2■■□□□ 1.94
PMPCB-205ENST00000453466 POLKQ9UBT6 870 aa27.18■■□□□ 1.94
PMPCB-205ENST00000453466 FLT4P35916 1363 aa27.17■■□□□ 1.94
PMPCB-205ENST00000453466 CC2D1BQ5T0F9 858 aaKnown RBP27.17■■□□□ 1.94
PMPCB-205ENST00000453466 HSP90AB2PQ58FF8 381 aa27.16■■□□□ 1.94
PMPCB-205ENST00000453466 KRT27Q7Z3Y8 459 aa27.16■■□□□ 1.94
PMPCB-205ENST00000453466 INSRP06213 1382 aa27.15■■□□□ 1.94
PMPCB-205ENST00000453466 NPC1L1Q9UHC9 1359 aa27.15■■□□□ 1.94
PMPCB-205ENST00000453466 CDCA7Q9BWT1 371 aaPredicted RBP27.15■■□□□ 1.94
PMPCB-205ENST00000453466 RGPD5Q99666 1765 aa27.15■■□□□ 1.94
PMPCB-205ENST00000453466 ANP32CO43423 234 aa27.13■■□□□ 1.93
PMPCB-205ENST00000453466 ANKRD26Q9UPS8 1709 aa27.12■■□□□ 1.93
PMPCB-205ENST00000453466 SMG6Q86US8 1419 aaKnown RBP27.12■■□□□ 1.93
PMPCB-205ENST00000453466 CNGB1Q14028 1251 aaPredicted RBP27.11■■□□□ 1.93
PMPCB-205ENST00000453466 PDE3BQ13370 1112 aa27.11■■□□□ 1.93
PMPCB-205ENST00000453466 DDB1Q16531 1140 aa27.07■■□□□ 1.92
PMPCB-205ENST00000453466 THSD7AQ9UPZ6 1657 aa27.07■■□□□ 1.92
PMPCB-205ENST00000453466 IL2RBP14784 551 aa27.06■■□□□ 1.92
PMPCB-205ENST00000453466 NBPF6Q5VWK0 638 aa27.06■■□□□ 1.92
PMPCB-205ENST00000453466 NBPF4Q96M43 638 aa27.06■■□□□ 1.92
PMPCB-205ENST00000453466 UPF1Q92900 1129 aaKnown RBP eCLIP27.06■■□□□ 1.92
PMPCB-205ENST00000453466 PEAK1Q9H792 1746 aa27.05■■□□□ 1.92
PMPCB-205ENST00000453466 EXOC5O00471 708 aa27.05■■□□□ 1.92
PMPCB-205ENST00000453466 MAP2P11137 1827 aaKnown RBP27.04■■□□□ 1.92
PMPCB-205ENST00000453466 MTHFSP49914 203 aa27.01■■□□□ 1.91
PMPCB-205ENST00000453466 DISP2A7MBM2 1401 aa27.01■■□□□ 1.91
PMPCB-205ENST00000453466 FAM182BQ5T319 152 aa27■■□□□ 1.91
PMPCB-205ENST00000453466 BRWD3Q6RI45 1802 aa27■■□□□ 1.91
PMPCB-205ENST00000453466 EIF4A2Q14240 407 aaKnown RBP27■■□□□ 1.91
PMPCB-205ENST00000453466 FAM196AQ6ZSG2 479 aa27■■□□□ 1.91
PMPCB-205ENST00000453466 PRKRIP1Q9H875 184 aaPredicted RBP27■■□□□ 1.91
PMPCB-205ENST00000453466 FAM208AQ9UK61 1670 aaKnown RBP26.99■■□□□ 1.91
PMPCB-205ENST00000453466 CCER2I3L3R5 266 aa26.99■■□□□ 1.91
PMPCB-205ENST00000453466 CCDC125Q86Z20 511 aa26.99■■□□□ 1.91
PMPCB-205ENST00000453466 USHBP1Q8N6Y0 703 aa26.99■■□□□ 1.91
PMPCB-205ENST00000453466 RAPGEF4Q8WZA2 1011 aa26.98■■□□□ 1.91
PMPCB-205ENST00000453466 EYA1Q99502 592 aa26.97■■□□□ 1.91
PMPCB-205ENST00000453466 PARP4Q9UKK3 1724 aaKnown RBP26.96■■□□□ 1.91
PMPCB-205ENST00000453466 TATP17735 454 aaPredicted RBP26.94■■□□□ 1.9
PMPCB-205ENST00000453466 MARCH10Q8NA82 808 aaPredicted RBP26.93■■□□□ 1.9
PMPCB-205ENST00000453466 SF3B2Q13435 895 aaKnown RBP26.92■■□□□ 1.9
PMPCB-205ENST00000453466 ZCRB1Q8TBF4 217 aaKnown RBP26.91■■□□□ 1.9
PMPCB-205ENST00000453466 TNS2Q63HR2 1409 aa26.91■■□□□ 1.9
PMPCB-205ENST00000453466 PPP2R1AP30153 589 aa26.9■■□□□ 1.9
PMPCB-205ENST00000453466 IL13P35225 146 aa26.9■■□□□ 1.9
PMPCB-205ENST00000453466 EP400Q96L91 3159 aa26.9■■□□□ 1.9
PMPCB-205ENST00000453466 RALBP1Q15311 655 aa26.9■■□□□ 1.9
PMPCB-205ENST00000453466 OVOS2A0A0G2JMS6 1433 aa26.89■■□□□ 1.9
PMPCB-205ENST00000453466 LRRC37A3O60309 1634 aa26.89■■□□□ 1.9
PMPCB-205ENST00000453466 DIAPH1O60610 1272 aaKnown RBP26.89■■□□□ 1.89
PMPCB-205ENST00000453466 IGSF1Q8N6C5 1336 aa26.89■■□□□ 1.89
PMPCB-205ENST00000453466 WNK3Q9BYP7 1800 aa26.89■■□□□ 1.89
PMPCB-205ENST00000453466 RGPD2P0DJD1 1756 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms