RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 CNGB1Q14028 1251 aaPredicted RBP21.36■■□□□ 1.01
RBM39-219ENST00000453310 UNC5CLQ8IV45 518 aa21.36■■□□□ 1.01
RBM39-219ENST00000453310 MAP2P11137 1827 aaKnown RBP21.35■■□□□ 1.01
RBM39-219ENST00000453310 RGPD5Q99666 1765 aa21.35■■□□□ 1.01
RBM39-219ENST00000453310 COL5A2P05997 1499 aaPredicted RBP21.34■■□□□ 1.01
RBM39-219ENST00000453310 PEAK1Q9H792 1746 aa21.34■■□□□ 1.01
RBM39-219ENST00000453310 RTL1A6NKG5 1358 aa21.34■■□□□ 1.01
RBM39-219ENST00000453310 ATRNO75882 1429 aa21.33■■□□□ 1.01
RBM39-219ENST00000453310 AMPHP49418 695 aa21.33■■□□□ 1.01
RBM39-219ENST00000453310 AXIN2Q9Y2T1 843 aa21.33■■□□□ 1.01
RBM39-219ENST00000453310 BLMP54132 1417 aaPredicted RBP21.32■■□□□ 1
RBM39-219ENST00000453310 IP6K1Q92551 441 aa21.32■■□□□ 1
RBM39-219ENST00000453310 EMILIN1Q9Y6C2 1016 aa21.32■■□□□ 1
RBM39-219ENST00000453310 KIF24Q5T7B8 1368 aa21.32■■□□□ 1
RBM39-219ENST00000453310 HOXC9P31274 260 aa21.31■■□□□ 1
RBM39-219ENST00000453310 STRN4Q9NRL3 753 aa21.31■■□□□ 1
RBM39-219ENST00000453310 TRPC5Q9UL62 973 aaPredicted RBP21.31■■□□□ 1
RBM39-219ENST00000453310 EVA1CP58658 441 aa21.3■■□□□ 1
RBM39-219ENST00000453310 POTEAQ6S8J7 498 aa21.3■■□□□ 1
RBM39-219ENST00000453310 QTRT2Q9H974 415 aaKnown RBP21.3■■□□□ 1
RBM39-219ENST00000453310 POLKQ9UBT6 870 aa21.3■■□□□ 1
RBM39-219ENST00000453310 FLT4P35916 1363 aa21.3■■□□□ 1
RBM39-219ENST00000453310 SMG6Q86US8 1419 aaKnown RBP21.29■■□□□ 1
RBM39-219ENST00000453310 VPS72Q15906 364 aa21.29■■□□□ 1
RBM39-219ENST00000453310 PPM1GO15355 546 aaPredicted RBP21.28■■□□□ 1
RBM39-219ENST00000453310 ERBB3P21860 1342 aa21.27■□□□□ 0.99
RBM39-219ENST00000453310 PARD3Q8TEW0 1356 aa21.26■□□□□ 0.99
RBM39-219ENST00000453310 LARP1Q6PKG0 1096 aaKnown RBP21.26■□□□□ 0.99
RBM39-219ENST00000453310 CCDC9Q9Y3X0 531 aaKnown RBP21.26■□□□□ 0.99
RBM39-219ENST00000453310 WDR17Q8IZU2 1322 aa21.26■□□□□ 0.99
RBM39-219ENST00000453310 CDK12Q9NYV4 1490 aaPredicted RBP21.26■□□□□ 0.99
RBM39-219ENST00000453310 INSRP06213 1382 aa21.25■□□□□ 0.99
RBM39-219ENST00000453310 CSB-PGBD3P0DP91 1061 aa21.25■□□□□ 0.99
RBM39-219ENST00000453310 GLI3P10071 1580 aa21.25■□□□□ 0.99
RBM39-219ENST00000453310 HSP90AB2PQ58FF8 381 aa21.25■□□□□ 0.99
RBM39-219ENST00000453310 ANKRD24Q8TF21 1146 aa21.25■□□□□ 0.99
RBM39-219ENST00000453310 FAM208AQ9UK61 1670 aaKnown RBP21.24■□□□□ 0.99
RBM39-219ENST00000453310 CRB1P82279 1406 aa21.24■□□□□ 0.99
RBM39-219ENST00000453310 GJD4Q96KN9 370 aaPredicted RBP21.24■□□□□ 0.99
RBM39-219ENST00000453310 SPATA31A5Q5VU36 1347 aa21.24■□□□□ 0.99
RBM39-219ENST00000453310 SPATA31A7Q8IWB4 1347 aa21.24■□□□□ 0.99
RBM39-219ENST00000453310 RBM6P78332 1123 aaKnown RBP21.23■□□□□ 0.99
RBM39-219ENST00000453310 LTV1Q96GA3 475 aaPredicted RBP21.23■□□□□ 0.99
RBM39-219ENST00000453310 RXRBP28702 533 aa21.22■□□□□ 0.99
RBM39-219ENST00000453310 MTHFSP49914 203 aa21.22■□□□□ 0.99
RBM39-219ENST00000453310 TOM1L2Q6ZVM7 507 aa21.22■□□□□ 0.99
RBM39-219ENST00000453310 SPATA31A1Q5TZJ5 1347 aa21.22■□□□□ 0.99
RBM39-219ENST00000453310 PPP2R1AP30153 589 aa21.2■□□□□ 0.98
RBM39-219ENST00000453310 RALBP1Q15311 655 aa21.2■□□□□ 0.98
RBM39-219ENST00000453310 USP35Q9P2H5 1018 aa21.2■□□□□ 0.98
RBM39-219ENST00000453310 RGPD2P0DJD1 1756 aa21.19■□□□□ 0.98
RBM39-219ENST00000453310 CARD10Q9BWT7 1032 aa21.18■□□□□ 0.98
RBM39-219ENST00000453310 NLRP2Q9NX02 1062 aa21.18■□□□□ 0.98
RBM39-219ENST00000453310 TCP11L2Q8N4U5 519 aa21.17■□□□□ 0.98
RBM39-219ENST00000453310 WNK3Q9BYP7 1800 aa21.16■□□□□ 0.98
RBM39-219ENST00000453310 EIF4A2Q14240 407 aaKnown RBP21.16■□□□□ 0.98
RBM39-219ENST00000453310 PRKRIP1Q9H875 184 aaPredicted RBP21.16■□□□□ 0.98
RBM39-219ENST00000453310 THRAP3Q9Y2W1 955 aaKnown RBP21.16■□□□□ 0.98
RBM39-219ENST00000453310 RGS12O14924 1447 aa21.15■□□□□ 0.98
RBM39-219ENST00000453310 FAM98CQ17RN3 349 aaKnown RBP21.15■□□□□ 0.98
RBM39-219ENST00000453310 COL3A1P02461 1466 aaPredicted RBP21.14■□□□□ 0.98
RBM39-219ENST00000453310 BARGINQ6ZT62 677 aa21.14■□□□□ 0.97
RBM39-219ENST00000453310 THSD7AQ9UPZ6 1657 aa21.14■□□□□ 0.97
RBM39-219ENST00000453310 MYBBP1AQ9BQG0 1328 aaKnown RBP21.13■□□□□ 0.97
RBM39-219ENST00000453310 NBPF6Q5VWK0 638 aa21.13■□□□□ 0.97
RBM39-219ENST00000453310 NBPF4Q96M43 638 aa21.13■□□□□ 0.97
RBM39-219ENST00000453310 ONECUT3O60422 494 aaPredicted RBP21.12■□□□□ 0.97
RBM39-219ENST00000453310 CFAP53Q96M91 514 aa21.11■□□□□ 0.97
RBM39-219ENST00000453310 DISP2A7MBM2 1401 aa21.11■□□□□ 0.97
RBM39-219ENST00000453310 NCAPD2Q15021 1401 aa21.11■□□□□ 0.97
RBM39-219ENST00000453310 RGPD1P0DJD0 1748 aa21.1■□□□□ 0.97
RBM39-219ENST00000453310 A0A0G2JS52 829 aa21.1■□□□□ 0.97
RBM39-219ENST00000453310 IL13P35225 146 aa21.1■□□□□ 0.97
RBM39-219ENST00000453310 MYT1Q01538 1121 aa21.1■□□□□ 0.97
RBM39-219ENST00000453310 USHBP1Q8N6Y0 703 aa21.1■□□□□ 0.97
RBM39-219ENST00000453310 EYA1Q99502 592 aa21.1■□□□□ 0.97
RBM39-219ENST00000453310 PARP4Q9UKK3 1724 aaKnown RBP21.09■□□□□ 0.97
RBM39-219ENST00000453310 ANP32CO43423 234 aa21.09■□□□□ 0.97
RBM39-219ENST00000453310 DIAPH1O60610 1272 aaKnown RBP21.09■□□□□ 0.97
RBM39-219ENST00000453310 SEPT12Q8IYM1 358 aa21.09■□□□□ 0.97
RBM39-219ENST00000453310 IGSF1Q8N6C5 1336 aa21.08■□□□□ 0.97
RBM39-219ENST00000453310 BRWD3Q6RI45 1802 aa21.08■□□□□ 0.96
RBM39-219ENST00000453310 LRRC37A3O60309 1634 aa21.07■□□□□ 0.96
RBM39-219ENST00000453310 CDCA7Q9BWT1 371 aaPredicted RBP21.07■□□□□ 0.96
RBM39-219ENST00000453310 MEGF6O75095 1541 aa21.06■□□□□ 0.96
RBM39-219ENST00000453310 IL2RBP14784 551 aa21.06■□□□□ 0.96
RBM39-219ENST00000453310 ILDR2Q71H61 639 aa21.06■□□□□ 0.96
RBM39-219ENST00000453310 RAPGEF4Q8WZA2 1011 aa21.03■□□□□ 0.96
RBM39-219ENST00000453310 OVOS2A0A0G2JMS6 1433 aa21.03■□□□□ 0.96
RBM39-219ENST00000453310 TNS2Q63HR2 1409 aa21.03■□□□□ 0.96
RBM39-219ENST00000453310 KDRP35968 1356 aa21.01■□□□□ 0.95
RBM39-219ENST00000453310 U2SURPO15042 1029 aaKnown RBP21.01■□□□□ 0.95
RBM39-219ENST00000453310 DDB1Q16531 1140 aa21.01■□□□□ 0.95
RBM39-219ENST00000453310 SULT6B1Q6IMI4 303 aa21.01■□□□□ 0.95
RBM39-219ENST00000453310 AEBP1Q8IUX7 1158 aa21.01■□□□□ 0.95
RBM39-219ENST00000453310 NUDCQ9Y266 331 aa21.01■□□□□ 0.95
RBM39-219ENST00000453310 TATP17735 454 aaPredicted RBP21■□□□□ 0.95
RBM39-219ENST00000453310 KRT27Q7Z3Y8 459 aa21■□□□□ 0.95
RBM39-219ENST00000453310 PKD1L3Q7Z443 1732 aa20.98■□□□□ 0.95
RBM39-219ENST00000453310 SHANK3Q9BYB0 1731 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms