RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-222ENST00000449504 ACEP12821 1306 aa10.68□□□□□ -0.7
HDLBP-222ENST00000449504 NLRP13Q86W25 1043 aa10.68□□□□□ -0.7
HDLBP-222ENST00000449504 COL5A2P05997 1499 aaPredicted RBP10.68□□□□□ -0.7
HDLBP-222ENST00000449504 ATP7BP35670 1465 aa10.68□□□□□ -0.7
HDLBP-222ENST00000449504 PARP4Q9UKK3 1724 aaKnown RBP10.67□□□□□ -0.7
HDLBP-222ENST00000449504 CPDO75976 1380 aa10.67□□□□□ -0.7
HDLBP-222ENST00000449504 PEAK1Q9H792 1746 aa10.67□□□□□ -0.7
HDLBP-222ENST00000449504 MAP3K5Q99683 1374 aa10.66□□□□□ -0.7
HDLBP-222ENST00000449504 HSPA6P17066 643 aa10.66□□□□□ -0.7
HDLBP-222ENST00000449504 POLD1P28340 1107 aa10.66□□□□□ -0.7
HDLBP-222ENST00000449504 ZNF526Q8TF50 670 aaPredicted RBP10.66□□□□□ -0.7
HDLBP-222ENST00000449504 CDK19Q9BWU1 502 aa10.66□□□□□ -0.7
HDLBP-222ENST00000449504 KDM2AQ9Y2K7 1162 aa10.66□□□□□ -0.7
HDLBP-222ENST00000449504 RGPD3A6NKT7 1758 aaPredicted RBP10.66□□□□□ -0.7
HDLBP-222ENST00000449504 RGPD4Q7Z3J3 1758 aa10.66□□□□□ -0.7
HDLBP-222ENST00000449504 UTRNP46939 3433 aa10.66□□□□□ -0.7
HDLBP-222ENST00000449504 NLGN2Q8NFZ4 835 aa10.65□□□□□ -0.7
HDLBP-222ENST00000449504 ACSBG1Q96GR2 724 aa10.65□□□□□ -0.7
HDLBP-222ENST00000449504 GPBP1L1Q9HC44 474 aaPredicted RBP10.65□□□□□ -0.7
HDLBP-222ENST00000449504 USP19O94966 1318 aa10.64□□□□□ -0.71
HDLBP-222ENST00000449504 LMO7Q8WWI1 1683 aa10.64□□□□□ -0.71
HDLBP-222ENST00000449504 SBF2Q86WG5 1849 aa10.64□□□□□ -0.71
HDLBP-222ENST00000449504 EXOC5O00471 708 aa10.64□□□□□ -0.71
HDLBP-222ENST00000449504 ZNF827Q17R98 1081 aa10.64□□□□□ -0.71
HDLBP-222ENST00000449504 CCDC61Q9Y6R9 512 aa10.64□□□□□ -0.71
HDLBP-222ENST00000449504 SHANK3Q9BYB0 1731 aa10.64□□□□□ -0.71
HDLBP-222ENST00000449504 LRRC37A3O60309 1634 aa10.63□□□□□ -0.71
HDLBP-222ENST00000449504 GRIN3BO60391 1043 aa10.63□□□□□ -0.71
HDLBP-222ENST00000449504 CAPN15O75808 1086 aa10.63□□□□□ -0.71
HDLBP-222ENST00000449504 CSB-PGBD3P0DP91 1061 aa10.63□□□□□ -0.71
HDLBP-222ENST00000449504 YBX3P16989 372 aaKnown RBP eCLIP10.63□□□□□ -0.71
HDLBP-222ENST00000449504 CDCA7Q9BWT1 371 aaPredicted RBP10.63□□□□□ -0.71
HDLBP-222ENST00000449504 ATP10DQ9P241 1426 aa10.63□□□□□ -0.71
HDLBP-222ENST00000449504 NLRP6P59044 892 aa10.62□□□□□ -0.71
HDLBP-222ENST00000449504 POLR3AO14802 1390 aaPredicted RBP10.62□□□□□ -0.71
HDLBP-222ENST00000449504 WDR17Q8IZU2 1322 aa10.61□□□□□ -0.71
HDLBP-222ENST00000449504 ADGRB1O14514 1584 aa10.61□□□□□ -0.71
HDLBP-222ENST00000449504 PLEKHG3A1L390 1219 aa10.61□□□□□ -0.71
HDLBP-222ENST00000449504 AXIN2Q9Y2T1 843 aa10.61□□□□□ -0.71
HDLBP-222ENST00000449504 AATKQ6ZMQ8 1374 aa10.61□□□□□ -0.71
HDLBP-222ENST00000449504 BCL9O00512 1426 aa10.6□□□□□ -0.71
HDLBP-222ENST00000449504 SOX12O15370 315 aa10.6□□□□□ -0.71
HDLBP-222ENST00000449504 SLC16A10Q8TF71 515 aa10.6□□□□□ -0.71
HDLBP-222ENST00000449504 ITSN1Q15811 1721 aa10.59□□□□□ -0.71
HDLBP-222ENST00000449504 DCAF11Q8TEB1 546 aa10.59□□□□□ -0.71
HDLBP-222ENST00000449504 LRRC4BQ9NT99 713 aa10.59□□□□□ -0.71
HDLBP-222ENST00000449504 CEP350Q5VT06 3117 aa10.58□□□□□ -0.72
HDLBP-222ENST00000449504 SRPK2P78362 688 aaKnown RBP10.58□□□□□ -0.72
HDLBP-222ENST00000449504 CARD10Q9BWT7 1032 aa10.58□□□□□ -0.72
HDLBP-222ENST00000449504 TFCP2L1Q9NZI6 479 aa10.58□□□□□ -0.72
HDLBP-222ENST00000449504 KCNQ4P56696 695 aa10.57□□□□□ -0.72
HDLBP-222ENST00000449504 AKT1S1Q96B36 256 aa10.57□□□□□ -0.72
HDLBP-222ENST00000449504 PNPLA7Q6ZV29 1317 aa10.57□□□□□ -0.72
HDLBP-222ENST00000449504 BRD4O60885 1362 aaPredicted RBP10.56□□□□□ -0.72
HDLBP-222ENST00000449504 USP6P35125 1406 aa10.56□□□□□ -0.72
HDLBP-222ENST00000449504 AKAP12Q02952 1782 aa10.55□□□□□ -0.72
HDLBP-222ENST00000449504 CABP2Q9NPB3 220 aa10.55□□□□□ -0.72
HDLBP-222ENST00000449504 WWC3Q9ULE0 1092 aa10.55□□□□□ -0.72
HDLBP-222ENST00000449504 PPIP5K1Q6PFW1 1433 aa10.55□□□□□ -0.72
HDLBP-222ENST00000449504 APLP1P51693 650 aa10.54□□□□□ -0.72
HDLBP-222ENST00000449504 COL13A1Q5TAT6 717 aaPredicted RBP10.54□□□□□ -0.72
HDLBP-222ENST00000449504 MSL1Q68DK7 614 aa10.54□□□□□ -0.72
HDLBP-222ENST00000449504 ARHGEF25Q86VW2 580 aa10.54□□□□□ -0.72
HDLBP-222ENST00000449504 CABP1Q9NZU7 370 aa10.54□□□□□ -0.72
HDLBP-222ENST00000449504 TOPAZ1Q8N9V7 1692 aa10.53□□□□□ -0.72
HDLBP-222ENST00000449504 NLRP2Q9NX02 1062 aa10.53□□□□□ -0.72
HDLBP-222ENST00000449504 PAPPAQ13219 1627 aa10.53□□□□□ -0.72
HDLBP-222ENST00000449504 CCDC7Q96M83 1385 aa10.52□□□□□ -0.72
HDLBP-222ENST00000449504 TNS2Q63HR2 1409 aa10.52□□□□□ -0.73
HDLBP-222ENST00000449504 KIF3CO14782 793 aa10.52□□□□□ -0.73
HDLBP-222ENST00000449504 SLC27A3Q5K4L6 730 aa10.52□□□□□ -0.73
HDLBP-222ENST00000449504 POTEHQ6S545 545 aa10.52□□□□□ -0.73
HDLBP-222ENST00000449504 DNAJC5GQ8N7S2 189 aa10.52□□□□□ -0.73
HDLBP-222ENST00000449504 KCNH5Q8NCM2 988 aa10.52□□□□□ -0.73
HDLBP-222ENST00000449504 SYTL4Q96C24 671 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-222ENST00000449504 CPSF1Q10570 1443 aaKnown RBP10.51□□□□□ -0.73
HDLBP-222ENST00000449504 NHSQ6T4R5 1651 aa10.51□□□□□ -0.73
HDLBP-222ENST00000449504 IL2RBP14784 551 aa10.51□□□□□ -0.73
HDLBP-222ENST00000449504 TNS4Q8IZW8 715 aa10.51□□□□□ -0.73
HDLBP-222ENST00000449504 DDX54Q8TDD1 881 aaKnown RBP10.51□□□□□ -0.73
HDLBP-222ENST00000449504 SLIT3O75094 1523 aa10.51□□□□□ -0.73
HDLBP-222ENST00000449504 ARHGEF28Q8N1W1 1705 aaKnown RBP10.5□□□□□ -0.73
HDLBP-222ENST00000449504 WNK3Q9BYP7 1800 aa10.5□□□□□ -0.73
HDLBP-222ENST00000449504 COL23A1Q86Y22 540 aaPredicted RBP10.5□□□□□ -0.73
HDLBP-222ENST00000449504 ADCY9O60503 1353 aa10.5□□□□□ -0.73
HDLBP-222ENST00000449504 COL18A1P39060 1754 aa10.49□□□□□ -0.73
HDLBP-222ENST00000449504 CD2APQ9Y5K6 639 aa10.49□□□□□ -0.73
HDLBP-222ENST00000449504 PRELPP51888 382 aa10.48□□□□□ -0.73
HDLBP-222ENST00000449504 HTRA3P83110 453 aa10.48□□□□□ -0.73
HDLBP-222ENST00000449504 BTAF1O14981 1849 aa10.48□□□□□ -0.73
HDLBP-222ENST00000449504 TOMM70O94826 608 aa10.47□□□□□ -0.73
HDLBP-222ENST00000449504 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
HDLBP-222ENST00000449504 NCBP3Q53F19 620 aaKnown RBP10.47□□□□□ -0.73
HDLBP-222ENST00000449504 STAC3Q96MF2 364 aa10.47□□□□□ -0.73
HDLBP-222ENST00000449504 CCNL1Q9UK58 526 aaPredicted RBP10.47□□□□□ -0.73
HDLBP-222ENST00000449504 TTC21BQ7Z4L5 1316 aa10.47□□□□□ -0.73
HDLBP-222ENST00000449504 NBPF1Q3BBV0 1214 aa10.46□□□□□ -0.73
HDLBP-222ENST00000449504 ABCC6O95255 1503 aa10.46□□□□□ -0.74
HDLBP-222ENST00000449504 RGPD5Q99666 1765 aa10.46□□□□□ -0.74
HDLBP-222ENST00000449504 IGSF1Q8N6C5 1336 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms