RNA–Protein interactions for RNA: ENST00000449261.6

BRPF3-206, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-206ENST00000449261 NINLQ9Y2I6 1382 aa13.76□□□□□ -0.21
BRPF3-206ENST00000449261 TEX2Q8IWB9 1127 aa13.76□□□□□ -0.21
BRPF3-206ENST00000449261 CNKSR2Q8WXI2 1034 aa13.76□□□□□ -0.21
BRPF3-206ENST00000449261 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
BRPF3-206ENST00000449261 AEBP1Q8IUX7 1158 aa13.76□□□□□ -0.21
BRPF3-206ENST00000449261 PPP6R1Q9UPN7 881 aa13.76□□□□□ -0.21
BRPF3-206ENST00000449261 PES1O00541 588 aaKnown RBP13.75□□□□□ -0.21
BRPF3-206ENST00000449261 FOXO3O43524 673 aa13.75□□□□□ -0.21
BRPF3-206ENST00000449261 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.75□□□□□ -0.21
BRPF3-206ENST00000449261 WASLO00401 505 aaPredicted RBP13.75□□□□□ -0.21
BRPF3-206ENST00000449261 MYL6BP14649 208 aa13.75□□□□□ -0.21
BRPF3-206ENST00000449261 PIP4K2BP78356 416 aa13.75□□□□□ -0.21
BRPF3-206ENST00000449261 ERC1Q8IUD2 1116 aa13.75□□□□□ -0.21
BRPF3-206ENST00000449261 FAM13BQ9NYF5 915 aa13.75□□□□□ -0.21
BRPF3-206ENST00000449261 PHF8Q9UPP1 1060 aa13.75□□□□□ -0.21
BRPF3-206ENST00000449261 TBC1D2BQ9UPU7 963 aa13.75□□□□□ -0.21
BRPF3-206ENST00000449261 GPATCH8Q9UKJ3 1502 aaKnown RBP13.75□□□□□ -0.21
BRPF3-206ENST00000449261 GOLGA6L19H0YKK7 550 aa13.75□□□□□ -0.21
BRPF3-206ENST00000449261 TPD52L1Q16890 204 aaPredicted RBP13.75□□□□□ -0.21
BRPF3-206ENST00000449261 DNAJC2Q99543 621 aaKnown RBP13.75□□□□□ -0.21
BRPF3-206ENST00000449261 CCDC66A2RUB6 948 aa13.75□□□□□ -0.21
BRPF3-206ENST00000449261 FYB1O15117 783 aa13.75□□□□□ -0.21
BRPF3-206ENST00000449261 ZNF428Q96B54 188 aa13.75□□□□□ -0.21
BRPF3-206ENST00000449261 PHF23Q9BUL5 403 aaPredicted RBP13.75□□□□□ -0.21
BRPF3-206ENST00000449261 NUCB2P80303 420 aa13.74□□□□□ -0.21
BRPF3-206ENST00000449261 THUMPD2Q9BTF0 503 aaKnown RBP13.74□□□□□ -0.21
BRPF3-206ENST00000449261 BTBD11A6QL63 1104 aa13.74□□□□□ -0.21
BRPF3-206ENST00000449261 CTDP1Q9Y5B0 961 aaPredicted RBP13.74□□□□□ -0.21
BRPF3-206ENST00000449261 MVPQ14764 893 aaKnown RBP13.74□□□□□ -0.21
BRPF3-206ENST00000449261 BICD2Q8TD16 824 aa13.74□□□□□ -0.21
BRPF3-206ENST00000449261 THOC2Q8NI27 1593 aaKnown RBP13.74□□□□□ -0.21
BRPF3-206ENST00000449261 ZNF622Q969S3 477 aaKnown RBP eCLIP13.73□□□□□ -0.21
BRPF3-206ENST00000449261 CNNM1Q9NRU3 951 aa13.73□□□□□ -0.21
BRPF3-206ENST00000449261 NOS1P29475 1434 aa13.73□□□□□ -0.21
BRPF3-206ENST00000449261 PRDM10Q9NQV6 1147 aa13.73□□□□□ -0.21
BRPF3-206ENST00000449261 GNAT3A8MTJ3 354 aa13.73□□□□□ -0.21
BRPF3-206ENST00000449261 C14orf93Q9H972 538 aaKnown RBP13.73□□□□□ -0.21
BRPF3-206ENST00000449261 SLFN5Q08AF3 891 aa13.72□□□□□ -0.21
BRPF3-206ENST00000449261 ATP10BO94823 1461 aa13.72□□□□□ -0.21
BRPF3-206ENST00000449261 SAFBQ15424 915 aaKnown RBP eCLIP13.72□□□□□ -0.21
BRPF3-206ENST00000449261 SAMD1Q6SPF0 538 aaPredicted RBP13.72□□□□□ -0.21
BRPF3-206ENST00000449261 SIL1Q9H173 461 aa13.72□□□□□ -0.21
BRPF3-206ENST00000449261 EMILIN1Q9Y6C2 1016 aa13.72□□□□□ -0.21
BRPF3-206ENST00000449261 UNC13AQ9UPW8 1703 aa13.72□□□□□ -0.21
BRPF3-206ENST00000449261 RPRD2Q5VT52 1461 aaKnown RBP13.72□□□□□ -0.21
BRPF3-206ENST00000449261 PSMA5P28066 241 aa13.71□□□□□ -0.21
BRPF3-206ENST00000449261 FOSBP53539 338 aa13.71□□□□□ -0.21
BRPF3-206ENST00000449261 MCM10Q7L590 875 aa13.71□□□□□ -0.21
BRPF3-206ENST00000449261 LRRCC1Q9C099 1032 aa13.7□□□□□ -0.22
BRPF3-206ENST00000449261 MIS18AQ9NYP9 233 aa13.7□□□□□ -0.22
BRPF3-206ENST00000449261 HIP1O00291 1037 aa13.7□□□□□ -0.22
BRPF3-206ENST00000449261 DCTN1Q14203 1278 aa13.7□□□□□ -0.22
BRPF3-206ENST00000449261 NEK4P51957 841 aa13.7□□□□□ -0.22
BRPF3-206ENST00000449261 SRGAP3O43295 1099 aa13.7□□□□□ -0.22
BRPF3-206ENST00000449261 TPM3P06753 285 aa13.7□□□□□ -0.22
BRPF3-206ENST00000449261 SSR1P43307 286 aaKnown RBP13.7□□□□□ -0.22
BRPF3-206ENST00000449261 CCDC158Q5M9N0 1113 aa13.7□□□□□ -0.22
BRPF3-206ENST00000449261 TSPYL1Q9H0U9 437 aa13.69□□□□□ -0.22
BRPF3-206ENST00000449261 TCEAL9Q9UHQ7 104 aa13.69□□□□□ -0.22
BRPF3-206ENST00000449261 FAM135AQ9P2D6 1515 aa13.69□□□□□ -0.22
BRPF3-206ENST00000449261 PLCH2O75038 1416 aa13.69□□□□□ -0.22
BRPF3-206ENST00000449261 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.69□□□□□ -0.22
BRPF3-206ENST00000449261 DUSP27Q5VZP5 1158 aa13.69□□□□□ -0.22
BRPF3-206ENST00000449261 SCAF11Q99590 1463 aaKnown RBP13.68□□□□□ -0.22
BRPF3-206ENST00000449261 ZHX1Q9UKY1 873 aaPredicted RBP13.68□□□□□ -0.22
BRPF3-206ENST00000449261 CCDC57Q2TAC2 916 aa13.68□□□□□ -0.22
BRPF3-206ENST00000449261 ASXL2Q76L83 1435 aa13.68□□□□□ -0.22
BRPF3-206ENST00000449261 TSR1Q2NL82 804 aaKnown RBP13.68□□□□□ -0.22
BRPF3-206ENST00000449261 USHBP1Q8N6Y0 703 aa13.68□□□□□ -0.22
BRPF3-206ENST00000449261 KDM5BQ9UGL1 1544 aa13.68□□□□□ -0.22
BRPF3-206ENST00000449261 PTCD1O75127 700 aaKnown RBP13.67□□□□□ -0.22
BRPF3-206ENST00000449261 CCDC47Q96A33 483 aaKnown RBP13.67□□□□□ -0.22
BRPF3-206ENST00000449261 MPHOSPH8Q99549 860 aa13.67□□□□□ -0.22
BRPF3-206ENST00000449261 SART3Q15020 963 aaKnown RBP13.67□□□□□ -0.22
BRPF3-206ENST00000449261 TTC39AQ5SRH9 613 aa13.67□□□□□ -0.22
BRPF3-206ENST00000449261 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.67□□□□□ -0.22
BRPF3-206ENST00000449261 GNL3LQ9NVN8 582 aaKnown RBP13.67□□□□□ -0.22
BRPF3-206ENST00000449261 CCDC73Q6ZRK6 1079 aa13.66□□□□□ -0.22
BRPF3-206ENST00000449261 RPAP2Q8IXW5 612 aaPredicted RBP13.66□□□□□ -0.22
BRPF3-206ENST00000449261 TMEM57Q8N5G2 664 aa13.66□□□□□ -0.22
BRPF3-206ENST00000449261 MTMR7Q9Y216 660 aa13.66□□□□□ -0.22
BRPF3-206ENST00000449261 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.66□□□□□ -0.22
BRPF3-206ENST00000449261 NOC3LQ8WTT2 800 aaKnown RBP13.66□□□□□ -0.22
BRPF3-206ENST00000449261 NUP153P49790 1475 aaKnown RBP13.66□□□□□ -0.22
BRPF3-206ENST00000449261 CEP126Q9P2H0 1117 aa13.66□□□□□ -0.22
BRPF3-206ENST00000449261 GOLGA6L1Q8N7Z2 621 aa13.66□□□□□ -0.22
BRPF3-206ENST00000449261 TPM1P09493 284 aa13.65□□□□□ -0.22
BRPF3-206ENST00000449261 RABEP1Q15276 862 aa13.65□□□□□ -0.22
BRPF3-206ENST00000449261 AMOTQ4VCS5 1084 aa13.65□□□□□ -0.22
BRPF3-206ENST00000449261 TAF7Q15545 349 aaPredicted RBP13.65□□□□□ -0.22
BRPF3-206ENST00000449261 CHD1LQ86WJ1 897 aa13.65□□□□□ -0.22
BRPF3-206ENST00000449261 ZNF592Q92610 1267 aa13.65□□□□□ -0.22
BRPF3-206ENST00000449261 CEP89Q96ST8 783 aa13.65□□□□□ -0.22
BRPF3-206ENST00000449261 HOOK1Q9UJC3 728 aaKnown RBP13.65□□□□□ -0.22
BRPF3-206ENST00000449261 TNRQ92752 1358 aa13.65□□□□□ -0.22
BRPF3-206ENST00000449261 ABCC11Q96J66 1382 aa13.65□□□□□ -0.22
BRPF3-206ENST00000449261 SSH1Q8WYL5 1049 aa13.65□□□□□ -0.22
BRPF3-206ENST00000449261 IL1RAPL2Q9NP60 686 aa13.65□□□□□ -0.22
BRPF3-206ENST00000449261 IFT57Q9NWB7 429 aa13.65□□□□□ -0.22
BRPF3-206ENST00000449261 SF3B2Q13435 895 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms