RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 CSB-PGBD3P0DP91 1061 aa22.13■■□□□ 1.13
TRA2A-203ENST00000448549 CARD11Q9BXL7 1154 aa22.13■■□□□ 1.13
TRA2A-203ENST00000448549 PARP4Q9UKK3 1724 aaKnown RBP22.12■■□□□ 1.13
TRA2A-203ENST00000448549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.11■■□□□ 1.13
TRA2A-203ENST00000448549 MARCH10Q8NA82 808 aaPredicted RBP22.11■■□□□ 1.13
TRA2A-203ENST00000448549 CDCA7Q9BWT1 371 aaPredicted RBP22.11■■□□□ 1.13
TRA2A-203ENST00000448549 COL18A1P39060 1754 aa22.1■■□□□ 1.13
TRA2A-203ENST00000448549 PTF1AQ7RTS3 328 aa22.1■■□□□ 1.13
TRA2A-203ENST00000448549 CARD10Q9BWT7 1032 aa22.1■■□□□ 1.13
TRA2A-203ENST00000448549 BCL11BQ9C0K0 894 aaPredicted RBP22.09■■□□□ 1.13
TRA2A-203ENST00000448549 SBNO2Q9Y2G9 1366 aa22.09■■□□□ 1.13
TRA2A-203ENST00000448549 TMC1Q8TDI8 760 aa22.08■■□□□ 1.13
TRA2A-203ENST00000448549 LRRC37A3O60309 1634 aa22.07■■□□□ 1.12
TRA2A-203ENST00000448549 PLSCR1O15162 318 aa22.07■■□□□ 1.12
TRA2A-203ENST00000448549 NME9Q86XW9 330 aa22.07■■□□□ 1.12
TRA2A-203ENST00000448549 RREB1Q92766 1687 aa22.07■■□□□ 1.12
TRA2A-203ENST00000448549 PEAK1Q9H792 1746 aa22.06■■□□□ 1.12
TRA2A-203ENST00000448549 NFAT5O94916 1531 aa22.06■■□□□ 1.12
TRA2A-203ENST00000448549 EXOC5O00471 708 aa22.05■■□□□ 1.12
TRA2A-203ENST00000448549 SLC12A5Q9H2X9 1139 aa22.05■■□□□ 1.12
TRA2A-203ENST00000448549 NUP188Q5SRE5 1749 aa22.05■■□□□ 1.12
TRA2A-203ENST00000448549 AKAP12Q02952 1782 aa22.04■■□□□ 1.12
TRA2A-203ENST00000448549 USP31Q70CQ4 1352 aa22.04■■□□□ 1.12
TRA2A-203ENST00000448549 CD163L1Q9NR16 1453 aa22.03■■□□□ 1.12
TRA2A-203ENST00000448549 TONSLQ96HA7 1378 aa22.03■■□□□ 1.12
TRA2A-203ENST00000448549 HDGFL2Q7Z4V5 671 aaPredicted RBP22.03■■□□□ 1.12
TRA2A-203ENST00000448549 CCDC7Q96M83 1385 aa22.02■■□□□ 1.12
TRA2A-203ENST00000448549 PROM2Q8N271 834 aa22.02■■□□□ 1.12
TRA2A-203ENST00000448549 BCL9O00512 1426 aa22.02■■□□□ 1.12
TRA2A-203ENST00000448549 SPON1Q9HCB6 807 aa22.01■■□□□ 1.11
TRA2A-203ENST00000448549 ANO8Q9HCE9 1232 aaPredicted RBP22.01■■□□□ 1.11
TRA2A-203ENST00000448549 KCNQ2O43526 872 aa22■■□□□ 1.11
TRA2A-203ENST00000448549 NLRP2Q9NX02 1062 aa22■■□□□ 1.11
TRA2A-203ENST00000448549 TERF2IPQ9NYB0 399 aa21.99■■□□□ 1.11
TRA2A-203ENST00000448549 ERBB3P21860 1342 aa21.99■■□□□ 1.11
TRA2A-203ENST00000448549 PPP1R1BQ9UD71 204 aaPredicted RBP21.98■■□□□ 1.11
TRA2A-203ENST00000448549 MON2Q7Z3U7 1717 aa21.97■■□□□ 1.11
TRA2A-203ENST00000448549 ABCC6O95255 1503 aa21.97■■□□□ 1.11
TRA2A-203ENST00000448549 A0A1W2PP64 1363 aa21.97■■□□□ 1.11
TRA2A-203ENST00000448549 EDC4Q6P2E9 1401 aaKnown RBP21.97■■□□□ 1.11
TRA2A-203ENST00000448549 ANKRD24Q8TF21 1146 aa21.96■■□□□ 1.11
TRA2A-203ENST00000448549 PUS7Q96PZ0 661 aaKnown RBP21.96■■□□□ 1.11
TRA2A-203ENST00000448549 RGPD5Q99666 1765 aa21.95■■□□□ 1.1
TRA2A-203ENST00000448549 TXNRD1Q16881 649 aa21.95■■□□□ 1.1
TRA2A-203ENST00000448549 PDGFDQ9GZP0 370 aaPredicted RBP21.95■■□□□ 1.1
TRA2A-203ENST00000448549 TNS2Q63HR2 1409 aa21.95■■□□□ 1.1
TRA2A-203ENST00000448549 IL2RBP14784 551 aa21.94■■□□□ 1.1
TRA2A-203ENST00000448549 WNK3Q9BYP7 1800 aa21.94■■□□□ 1.1
TRA2A-203ENST00000448549 ST20-MTHFSA0A0A6YYL1 179 aa21.93■■□□□ 1.1
TRA2A-203ENST00000448549 SBF2Q86WG5 1849 aa21.93■■□□□ 1.1
TRA2A-203ENST00000448549 ACSBG1Q96GR2 724 aa21.93■■□□□ 1.1
TRA2A-203ENST00000448549 TESK2Q96S53 571 aa21.93■■□□□ 1.1
TRA2A-203ENST00000448549 RGPD3A6NKT7 1758 aaPredicted RBP21.92■■□□□ 1.1
TRA2A-203ENST00000448549 RGPD4Q7Z3J3 1758 aa21.92■■□□□ 1.1
TRA2A-203ENST00000448549 STK32BQ9NY57 414 aa21.91■■□□□ 1.1
TRA2A-203ENST00000448549 ZBTB7AO95365 584 aa21.9■■□□□ 1.1
TRA2A-203ENST00000448549 USP54Q70EL1 1684 aa21.89■■□□□ 1.1
TRA2A-203ENST00000448549 SLC15A2Q16348 729 aa21.89■■□□□ 1.09
TRA2A-203ENST00000448549 IP6K1Q92551 441 aa21.89■■□□□ 1.09
TRA2A-203ENST00000448549 LTV1Q96GA3 475 aaPredicted RBP21.88■■□□□ 1.09
TRA2A-203ENST00000448549 NINLQ9Y2I6 1382 aa21.87■■□□□ 1.09
TRA2A-203ENST00000448549 COG3Q96JB2 828 aa21.86■■□□□ 1.09
TRA2A-203ENST00000448549 ATF5Q9Y2D1 282 aaPredicted RBP21.86■■□□□ 1.09
TRA2A-203ENST00000448549 SLC24A1O60721 1099 aa21.85■■□□□ 1.09
TRA2A-203ENST00000448549 FBLN1P23142 703 aa21.85■■□□□ 1.09
TRA2A-203ENST00000448549 PTGER2P43116 358 aa21.85■■□□□ 1.09
TRA2A-203ENST00000448549 DDX54Q8TDD1 881 aaKnown RBP21.84■■□□□ 1.09
TRA2A-203ENST00000448549 MAP3K19Q56UN5 1328 aa21.83■■□□□ 1.09
TRA2A-203ENST00000448549 DCAF8L1A6NGE4 600 aa21.83■■□□□ 1.09
TRA2A-203ENST00000448549 YY1P25490 414 aa21.83■■□□□ 1.09
TRA2A-203ENST00000448549 LTN1O94822 1766 aa21.83■■□□□ 1.09
TRA2A-203ENST00000448549 CASZ1Q86V15 1759 aa21.82■■□□□ 1.08
TRA2A-203ENST00000448549 AMPHP49418 695 aa21.82■■□□□ 1.08
TRA2A-203ENST00000448549 HOXC9P31274 260 aa21.81■■□□□ 1.08
TRA2A-203ENST00000448549 NHSQ6T4R5 1651 aa21.81■■□□□ 1.08
TRA2A-203ENST00000448549 ANKRD36BQ8N2N9 1353 aa21.79■■□□□ 1.08
TRA2A-203ENST00000448549 MTFR1LQ9H019 292 aa21.79■■□□□ 1.08
TRA2A-203ENST00000448549 LRRC4BQ9NT99 713 aa21.79■■□□□ 1.08
TRA2A-203ENST00000448549 TMF1P82094 1093 aa21.78■■□□□ 1.08
TRA2A-203ENST00000448549 TRIM26Q12899 539 aaPredicted RBP21.78■■□□□ 1.08
TRA2A-203ENST00000448549 FYB1O15117 783 aa21.77■■□□□ 1.08
TRA2A-203ENST00000448549 GGNBP2Q9H3C7 697 aa21.77■■□□□ 1.08
TRA2A-203ENST00000448549 USP47Q96K76 1375 aa21.76■■□□□ 1.07
TRA2A-203ENST00000448549 RRS1Q15050 365 aaKnown RBP21.76■■□□□ 1.07
TRA2A-203ENST00000448549 ZNF827Q17R98 1081 aa21.76■■□□□ 1.07
TRA2A-203ENST00000448549 SYTL4Q96C24 671 aaPredicted RBP21.75■■□□□ 1.07
TRA2A-203ENST00000448549 SGIP1Q9BQI5 828 aa21.75■■□□□ 1.07
TRA2A-203ENST00000448549 FHDC1Q9C0D6 1143 aaPredicted RBP21.75■■□□□ 1.07
TRA2A-203ENST00000448549 PRIM1P49642 420 aaKnown RBP21.74■■□□□ 1.07
TRA2A-203ENST00000448549 ZCRB1Q8TBF4 217 aaKnown RBP21.74■■□□□ 1.07
TRA2A-203ENST00000448549 SYT17Q9BSW7 474 aa21.74■■□□□ 1.07
TRA2A-203ENST00000448549 MYOM1P52179 1685 aa21.72■■□□□ 1.07
TRA2A-203ENST00000448549 SLC27A3Q5K4L6 730 aa21.72■■□□□ 1.07
TRA2A-203ENST00000448549 NBPF6Q5VWK0 638 aa21.72■■□□□ 1.07
TRA2A-203ENST00000448549 NBPF4Q96M43 638 aa21.72■■□□□ 1.07
TRA2A-203ENST00000448549 KCNQ4P56696 695 aa21.71■■□□□ 1.07
TRA2A-203ENST00000448549 USHBP1Q8N6Y0 703 aa21.71■■□□□ 1.07
TRA2A-203ENST00000448549 AKT1S1Q96B36 256 aa21.71■■□□□ 1.07
TRA2A-203ENST00000448549 RTL1A6NKG5 1358 aa21.71■■□□□ 1.07
TRA2A-203ENST00000448549 BTAF1O14981 1849 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms