RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 MAP3K19Q56UN5 1328 aa18.34■□□□□ 0.53
SNHG4-201ENST00000448190 TOM1L2Q6ZVM7 507 aa18.34■□□□□ 0.53
SNHG4-201ENST00000448190 SPATA31A1Q5TZJ5 1347 aa18.33■□□□□ 0.53
SNHG4-201ENST00000448190 SOCS7O14512 581 aa18.33■□□□□ 0.52
SNHG4-201ENST00000448190 PPM1GO15355 546 aaPredicted RBP18.33■□□□□ 0.52
SNHG4-201ENST00000448190 PHRF1Q9P1Y6 1649 aaKnown RBP18.33■□□□□ 0.52
SNHG4-201ENST00000448190 CRYBG1Q9Y4K1 1723 aa18.32■□□□□ 0.52
SNHG4-201ENST00000448190 IP6K1Q92551 441 aa18.32■□□□□ 0.52
SNHG4-201ENST00000448190 PER1O15534 1290 aaPredicted RBP18.31■□□□□ 0.52
SNHG4-201ENST00000448190 CC2D1BQ5T0F9 858 aaKnown RBP18.31■□□□□ 0.52
SNHG4-201ENST00000448190 MORC1Q86VD1 984 aa18.31■□□□□ 0.52
SNHG4-201ENST00000448190 ANKRD24Q8TF21 1146 aa18.31■□□□□ 0.52
SNHG4-201ENST00000448190 EMILIN1Q9Y6C2 1016 aa18.31■□□□□ 0.52
SNHG4-201ENST00000448190 COL14A1Q05707 1796 aaKnown RBP18.31■□□□□ 0.52
SNHG4-201ENST00000448190 RGS12O14924 1447 aa18.31■□□□□ 0.52
SNHG4-201ENST00000448190 NFAT5O94916 1531 aa18.3■□□□□ 0.52
SNHG4-201ENST00000448190 ONECUT3O60422 494 aaPredicted RBP18.3■□□□□ 0.52
SNHG4-201ENST00000448190 HOXC9P31274 260 aa18.3■□□□□ 0.52
SNHG4-201ENST00000448190 NLRP2Q9NX02 1062 aa18.3■□□□□ 0.52
SNHG4-201ENST00000448190 MYOM1P52179 1685 aa18.3■□□□□ 0.52
SNHG4-201ENST00000448190 MARF1Q9Y4F3 1742 aaKnown RBP18.29■□□□□ 0.52
SNHG4-201ENST00000448190 AMER1Q5JTC6 1135 aaPredicted RBP18.29■□□□□ 0.52
SNHG4-201ENST00000448190 TCP11L2Q8N4U5 519 aa18.29■□□□□ 0.52
SNHG4-201ENST00000448190 WDR17Q8IZU2 1322 aa18.28■□□□□ 0.52
SNHG4-201ENST00000448190 HSP90AB2PQ58FF8 381 aa18.28■□□□□ 0.52
SNHG4-201ENST00000448190 FAM182BQ5T319 152 aa18.28■□□□□ 0.52
SNHG4-201ENST00000448190 COL5A2P05997 1499 aaPredicted RBP18.27■□□□□ 0.52
SNHG4-201ENST00000448190 PLCH1Q4KWH8 1693 aa18.27■□□□□ 0.52
SNHG4-201ENST00000448190 POLKQ9UBT6 870 aa18.26■□□□□ 0.51
SNHG4-201ENST00000448190 GLI3P10071 1580 aa18.25■□□□□ 0.51
SNHG4-201ENST00000448190 CARD10Q9BWT7 1032 aa18.25■□□□□ 0.51
SNHG4-201ENST00000448190 CDK12Q9NYV4 1490 aaPredicted RBP18.25■□□□□ 0.51
SNHG4-201ENST00000448190 DDX10Q13206 875 aaKnown RBP18.24■□□□□ 0.51
SNHG4-201ENST00000448190 BARGINQ6ZT62 677 aa18.24■□□□□ 0.51
SNHG4-201ENST00000448190 KRT27Q7Z3Y8 459 aa18.24■□□□□ 0.51
SNHG4-201ENST00000448190 ERBB3P21860 1342 aa18.23■□□□□ 0.51
SNHG4-201ENST00000448190 CRB1P82279 1406 aa18.23■□□□□ 0.51
SNHG4-201ENST00000448190 LMO7Q8WWI1 1683 aa18.22■□□□□ 0.51
SNHG4-201ENST00000448190 USHBP1Q8N6Y0 703 aa18.22■□□□□ 0.51
SNHG4-201ENST00000448190 THRAP3Q9Y2W1 955 aaKnown RBP18.22■□□□□ 0.51
SNHG4-201ENST00000448190 NWD2Q9ULI1 1742 aa18.22■□□□□ 0.51
SNHG4-201ENST00000448190 NBPF6Q5VWK0 638 aa18.21■□□□□ 0.51
SNHG4-201ENST00000448190 UPF1Q92900 1129 aaKnown RBP eCLIP18.21■□□□□ 0.51
SNHG4-201ENST00000448190 NBPF4Q96M43 638 aa18.21■□□□□ 0.51
SNHG4-201ENST00000448190 NRAPQ86VF7 1730 aa18.2■□□□□ 0.5
SNHG4-201ENST00000448190 PDE3BQ13370 1112 aa18.2■□□□□ 0.5
SNHG4-201ENST00000448190 COL18A1P39060 1754 aa18.19■□□□□ 0.5
SNHG4-201ENST00000448190 NSD2O96028 1365 aa18.19■□□□□ 0.5
SNHG4-201ENST00000448190 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.18■□□□□ 0.5
SNHG4-201ENST00000448190 FLT4P35916 1363 aa18.17■□□□□ 0.5
SNHG4-201ENST00000448190 BLMP54132 1417 aaPredicted RBP18.17■□□□□ 0.5
SNHG4-201ENST00000448190 DDB1Q16531 1140 aa18.17■□□□□ 0.5
SNHG4-201ENST00000448190 INSRP06213 1382 aa18.17■□□□□ 0.5
SNHG4-201ENST00000448190 USP54Q70EL1 1684 aa18.16■□□□□ 0.5
SNHG4-201ENST00000448190 EXOC5O00471 708 aa18.16■□□□□ 0.5
SNHG4-201ENST00000448190 MTHFSP49914 203 aa18.16■□□□□ 0.5
SNHG4-201ENST00000448190 RTL1A6NKG5 1358 aa18.16■□□□□ 0.5
SNHG4-201ENST00000448190 IL2RBP14784 551 aa18.15■□□□□ 0.5
SNHG4-201ENST00000448190 EIF4A2Q14240 407 aaKnown RBP18.15■□□□□ 0.5
SNHG4-201ENST00000448190 CDCA7Q9BWT1 371 aaPredicted RBP18.14■□□□□ 0.49
SNHG4-201ENST00000448190 EYA1Q99502 592 aa18.13■□□□□ 0.49
SNHG4-201ENST00000448190 EP400Q96L91 3159 aa18.12■□□□□ 0.49
SNHG4-201ENST00000448190 KIF20BQ96Q89 1820 aa18.12■□□□□ 0.49
SNHG4-201ENST00000448190 MARCH10Q8NA82 808 aaPredicted RBP18.12■□□□□ 0.49
SNHG4-201ENST00000448190 KIF24Q5T7B8 1368 aa18.12■□□□□ 0.49
SNHG4-201ENST00000448190 ZNF316A6NFI3 1004 aaPredicted RBP18.11■□□□□ 0.49
SNHG4-201ENST00000448190 DDX54Q8TDD1 881 aaKnown RBP18.11■□□□□ 0.49
SNHG4-201ENST00000448190 RGPD5Q99666 1765 aa18.1■□□□□ 0.49
SNHG4-201ENST00000448190 ABCC6O95255 1503 aa18.1■□□□□ 0.49
SNHG4-201ENST00000448190 SMG6Q86US8 1419 aaKnown RBP18.1■□□□□ 0.49
SNHG4-201ENST00000448190 NPC1L1Q9UHC9 1359 aa18.1■□□□□ 0.49
SNHG4-201ENST00000448190 TRIM37O94972 964 aa18.1■□□□□ 0.49
SNHG4-201ENST00000448190 FAM196AQ6ZSG2 479 aa18.1■□□□□ 0.49
SNHG4-201ENST00000448190 LTN1O94822 1766 aa18.09■□□□□ 0.49
SNHG4-201ENST00000448190 PEAK1Q9H792 1746 aa18.09■□□□□ 0.49
SNHG4-201ENST00000448190 RAPGEF4Q8WZA2 1011 aa18.09■□□□□ 0.49
SNHG4-201ENST00000448190 DISP2A7MBM2 1401 aa18.08■□□□□ 0.49
SNHG4-201ENST00000448190 ZCRB1Q8TBF4 217 aaKnown RBP18.08■□□□□ 0.48
SNHG4-201ENST00000448190 TATP17735 454 aaPredicted RBP18.07■□□□□ 0.48
SNHG4-201ENST00000448190 PPP2R1AP30153 589 aa18.07■□□□□ 0.48
SNHG4-201ENST00000448190 IL13P35225 146 aa18.07■□□□□ 0.48
SNHG4-201ENST00000448190 SF3B2Q13435 895 aaKnown RBP18.06■□□□□ 0.48
SNHG4-201ENST00000448190 PTF1AQ7RTS3 328 aa18.06■□□□□ 0.48
SNHG4-201ENST00000448190 DEFB132Q7Z7B7 95 aa18.06■□□□□ 0.48
SNHG4-201ENST00000448190 AEBP1Q8IUX7 1158 aa18.05■□□□□ 0.48
SNHG4-201ENST00000448190 ACSBG1Q96GR2 724 aa18.05■□□□□ 0.48
SNHG4-201ENST00000448190 THSD7AQ9UPZ6 1657 aa18.05■□□□□ 0.48
SNHG4-201ENST00000448190 DIAPH1O60610 1272 aaKnown RBP18.04■□□□□ 0.48
SNHG4-201ENST00000448190 CCDC125Q86Z20 511 aa18.04■□□□□ 0.48
SNHG4-201ENST00000448190 SULT6B1Q6IMI4 303 aa18.03■□□□□ 0.48
SNHG4-201ENST00000448190 KCNQ2O43526 872 aa18.02■□□□□ 0.48
SNHG4-201ENST00000448190 APBA3O96018 575 aa18.02■□□□□ 0.48
SNHG4-201ENST00000448190 BRWD3Q6RI45 1802 aa18.02■□□□□ 0.47
SNHG4-201ENST00000448190 MEGF6O75095 1541 aa18.02■□□□□ 0.47
SNHG4-201ENST00000448190 U2SURPO15042 1029 aaKnown RBP18.01■□□□□ 0.47
SNHG4-201ENST00000448190 HMOX1P09601 288 aa18.01■□□□□ 0.47
SNHG4-201ENST00000448190 EN1Q05925 392 aaPredicted RBP18.01■□□□□ 0.47
SNHG4-201ENST00000448190 IGSF1Q8N6C5 1336 aa18■□□□□ 0.47
SNHG4-201ENST00000448190 CFAP53Q96M91 514 aa17.99■□□□□ 0.47
SNHG4-201ENST00000448190 MAP2P11137 1827 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms