RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 HOXA2O43364 376 aa5.87□□□□□ -1.47
PMS1-216ENST00000447734 WFS1O76024 890 aa5.87□□□□□ -1.47
PMS1-216ENST00000447734 ARID4AP29374 1257 aaPredicted RBP5.87□□□□□ -1.47
PMS1-216ENST00000447734 EIF4G2P78344 907 aaKnown RBP eCLIP5.87□□□□□ -1.47
PMS1-216ENST00000447734 MTMR2Q13614 643 aa5.87□□□□□ -1.47
PMS1-216ENST00000447734 KMT5BQ4FZB7 885 aa5.87□□□□□ -1.47
PMS1-216ENST00000447734 SCUBE3Q8IX30 993 aa5.87□□□□□ -1.47
PMS1-216ENST00000447734 STK32AQ8WU08 396 aa5.87□□□□□ -1.47
PMS1-216ENST00000447734 BCL2L13Q9BXK5 485 aa5.87□□□□□ -1.47
PMS1-216ENST00000447734 ZMIZ1Q9ULJ6 1067 aa5.87□□□□□ -1.47
PMS1-216ENST00000447734 WIPF1O43516 503 aa5.86□□□□□ -1.47
PMS1-216ENST00000447734 TCF3P15923 654 aa5.86□□□□□ -1.47
PMS1-216ENST00000447734 ZNF16P17020 682 aaPredicted RBP5.86□□□□□ -1.47
PMS1-216ENST00000447734 EPS8L1Q8TE68 723 aa5.86□□□□□ -1.47
PMS1-216ENST00000447734 SIRT1Q96EB6 747 aa5.86□□□□□ -1.47
PMS1-216ENST00000447734 NOVA2Q9UNW9 492 aaKnown RBP5.86□□□□□ -1.47
PMS1-216ENST00000447734 GUCA2AQ02747 115 aa5.85□□□□□ -1.47
PMS1-216ENST00000447734 KANK4Q5T7N3 995 aaPredicted RBP5.85□□□□□ -1.47
PMS1-216ENST00000447734 GIPC2Q8TF65 315 aa5.85□□□□□ -1.47
PMS1-216ENST00000447734 PCDHGC3Q9UN70 934 aa5.85□□□□□ -1.47
PMS1-216ENST00000447734 SOWAHDA6NJG2 315 aa5.84□□□□□ -1.47
PMS1-216ENST00000447734 NR1I2O75469 434 aa5.84□□□□□ -1.47
PMS1-216ENST00000447734 SMCPP49901 116 aaPredicted RBP5.84□□□□□ -1.47
PMS1-216ENST00000447734 PHLDB3Q6NSJ2 640 aa5.84□□□□□ -1.47
PMS1-216ENST00000447734 SSFA2P28290 1259 aa5.83□□□□□ -1.48
PMS1-216ENST00000447734 GCGRP47871 477 aa5.83□□□□□ -1.48
PMS1-216ENST00000447734 MARSP56192 900 aaKnown RBP5.83□□□□□ -1.48
PMS1-216ENST00000447734 NR6A1Q15406 480 aa5.83□□□□□ -1.48
PMS1-216ENST00000447734 CCDC125Q86Z20 511 aa5.83□□□□□ -1.48
PMS1-216ENST00000447734 THAP11Q96EK4 314 aa5.83□□□□□ -1.48
PMS1-216ENST00000447734 SPSB2Q99619 263 aa5.83□□□□□ -1.48
PMS1-216ENST00000447734 USP17L3A6NCW0 530 aa5.82□□□□□ -1.48
PMS1-216ENST00000447734 USP17L4A6NCW7 530 aa5.82□□□□□ -1.48
PMS1-216ENST00000447734 C11orf95C9JLR9 678 aaPredicted RBP5.82□□□□□ -1.48
PMS1-216ENST00000447734 CFAP99D6REC4 459 aa5.82□□□□□ -1.48
PMS1-216ENST00000447734 C6orf229H3BNL8 230 aa5.82□□□□□ -1.48
PMS1-216ENST00000447734 AXIN1O15169 862 aa5.82□□□□□ -1.48
PMS1-216ENST00000447734 RPIAP49247 311 aa5.82□□□□□ -1.48
PMS1-216ENST00000447734 USP17L2Q6R6M4 530 aa5.82□□□□□ -1.48
PMS1-216ENST00000447734 USP17L1Q7RTZ2 530 aa5.82□□□□□ -1.48
PMS1-216ENST00000447734 FAM160A2Q8N612 972 aaPredicted RBP5.82□□□□□ -1.48
PMS1-216ENST00000447734 HLA-CQ95604 372 aa5.82□□□□□ -1.48
PMS1-216ENST00000447734 DRC1Q96MC2 740 aa5.82□□□□□ -1.48
PMS1-216ENST00000447734 PRDM9Q9NQV7 894 aa5.82□□□□□ -1.48
PMS1-216ENST00000447734 BIN2Q9UBW5 565 aaPredicted RBP5.82□□□□□ -1.48
PMS1-216ENST00000447734 STK17AQ9UEE5 414 aa5.82□□□□□ -1.48
PMS1-216ENST00000447734 FAM196BA6NMK8 535 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 USP17L15C9J2P7 530 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 USP17L10C9JJH3 530 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 USP17L13C9JLJ4 530 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 USP17L12C9JPN9 530 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 USP17L11C9JVI0 530 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 USP17L21D6R901 530 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 USP17L18D6R9N7 530 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 USP17L22D6RA61 530 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 USP17L17D6RBQ6 530 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 USP17L19D6RCP7 530 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 USP17L20D6RJB6 530 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 SERPINB4P48594 390 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 USP17L24Q0WX57 530 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 CTC1Q2NKJ3 1217 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 ZNF326Q5BKZ1 582 aaKnown RBP5.81□□□□□ -1.48
PMS1-216ENST00000447734 NOM1Q5C9Z4 860 aaKnown RBP5.81□□□□□ -1.48
PMS1-216ENST00000447734 NFATC2IPQ8NCF5 419 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 SREK1Q8WXA9 508 aaKnown RBP5.81□□□□□ -1.48
PMS1-216ENST00000447734 C8orf37Q96NL8 207 aa5.81□□□□□ -1.48
PMS1-216ENST00000447734 FCF1Q9Y324 198 aaKnown RBP5.81□□□□□ -1.48
PMS1-216ENST00000447734 USP17L5A8MUK1 530 aa5.8□□□□□ -1.48
PMS1-216ENST00000447734 PIK3CDO00329 1044 aa5.8□□□□□ -1.48
PMS1-216ENST00000447734 SKIP12755 728 aa5.8□□□□□ -1.48
PMS1-216ENST00000447734 SNRPBP14678 240 aaKnown RBP5.8□□□□□ -1.48
PMS1-216ENST00000447734 NR1H3Q13133 447 aa5.8□□□□□ -1.48
PMS1-216ENST00000447734 PLEKHM2Q8IWE5 1019 aa5.8□□□□□ -1.48
PMS1-216ENST00000447734 CLP1Q92989 425 aaKnown RBP5.8□□□□□ -1.48
PMS1-216ENST00000447734 ANKRD33BA6NCL7 494 aa5.79□□□□□ -1.48
PMS1-216ENST00000447734 SMPD1P17405 629 aa5.79□□□□□ -1.48
PMS1-216ENST00000447734 ATP2B4P23634 1241 aa5.79□□□□□ -1.48
PMS1-216ENST00000447734 CANXP27824 592 aaKnown RBP5.79□□□□□ -1.48
PMS1-216ENST00000447734 MORN1Q5T089 497 aa5.79□□□□□ -1.48
PMS1-216ENST00000447734 LARP1Q6PKG0 1096 aaKnown RBP5.79□□□□□ -1.48
PMS1-216ENST00000447734 NPAS4Q8IUM7 802 aa5.79□□□□□ -1.48
PMS1-216ENST00000447734 FAM200AQ8TCP9 573 aa5.79□□□□□ -1.48
PMS1-216ENST00000447734 LOC100996750A0A140TA64 210 aa5.78□□□□□ -1.48
PMS1-216ENST00000447734 LORP23490 312 aaPredicted RBP5.78□□□□□ -1.48
PMS1-216ENST00000447734 VAMP1P23763 118 aa5.78□□□□□ -1.48
PMS1-216ENST00000447734 CRTC2Q53ET0 693 aaPredicted RBP5.78□□□□□ -1.48
PMS1-216ENST00000447734 CYP4X1Q8N118 509 aa5.78□□□□□ -1.48
PMS1-216ENST00000447734 DEPDC4Q8N2C3 294 aa5.78□□□□□ -1.48
PMS1-216ENST00000447734 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
PMS1-216ENST00000447734 SLAIN2Q9P270 581 aa5.78□□□□□ -1.48
PMS1-216ENST00000447734 MKRN1Q9UHC7 482 aaKnown RBP5.78□□□□□ -1.48
PMS1-216ENST00000447734 TERTO14746 1132 aaKnown RBP5.77□□□□□ -1.49
PMS1-216ENST00000447734 PPM1GO15355 546 aaPredicted RBP5.77□□□□□ -1.49
PMS1-216ENST00000447734 FBXO45P0C2W1 286 aa5.77□□□□□ -1.49
PMS1-216ENST00000447734 RASA1P20936 1047 aa5.77□□□□□ -1.49
PMS1-216ENST00000447734 ZC3H6P61129 1189 aaKnown RBP5.77□□□□□ -1.49
PMS1-216ENST00000447734 FUT2Q10981 343 aa5.77□□□□□ -1.49
PMS1-216ENST00000447734 GRIPAP1Q4V328 841 aa5.77□□□□□ -1.49
PMS1-216ENST00000447734 CDCA7Q9BWT1 371 aaPredicted RBP5.77□□□□□ -1.49
PMS1-216ENST00000447734 ATP13A2Q9NQ11 1180 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms