RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 UPF3BQ9BZI7 483 aaKnown RBP9.61□□□□□ -0.87
RIF1-205ENST00000444746 HSP90AB4PQ58FF6 505 aa9.61□□□□□ -0.87
RIF1-205ENST00000444746 DUSP27Q5VZP5 1158 aa9.61□□□□□ -0.87
RIF1-205ENST00000444746 SSH1Q8WYL5 1049 aa9.61□□□□□ -0.87
RIF1-205ENST00000444746 CCDC34Q96HJ3 373 aa9.61□□□□□ -0.87
RIF1-205ENST00000444746 NAIPQ13075 1403 aa9.61□□□□□ -0.87
RIF1-205ENST00000444746 CCDC73Q6ZRK6 1079 aa9.61□□□□□ -0.87
RIF1-205ENST00000444746 WWC3Q9ULE0 1092 aa9.61□□□□□ -0.87
RIF1-205ENST00000444746 TROQ12816 1431 aaPredicted RBP9.61□□□□□ -0.87
RIF1-205ENST00000444746 SMC2O95347 1197 aa9.61□□□□□ -0.87
RIF1-205ENST00000444746 GUCY1B3Q02153 619 aa9.61□□□□□ -0.87
RIF1-205ENST00000444746 SDF4Q9BRK5 362 aa9.61□□□□□ -0.87
RIF1-205ENST00000444746 CHRNA2Q15822 529 aa9.61□□□□□ -0.87
RIF1-205ENST00000444746 JAKMIP1Q96N16 626 aaKnown RBP9.61□□□□□ -0.87
RIF1-205ENST00000444746 NASPP49321 788 aaPredicted RBP9.6□□□□□ -0.87
RIF1-205ENST00000444746 MRC2Q9UBG0 1479 aa9.6□□□□□ -0.87
RIF1-205ENST00000444746 PRDM11Q9NQV5 511 aa9.6□□□□□ -0.87
RIF1-205ENST00000444746 NUCB2P80303 420 aa9.6□□□□□ -0.87
RIF1-205ENST00000444746 CAMK4Q16566 473 aa9.6□□□□□ -0.87
RIF1-205ENST00000444746 DHX37Q8IY37 1157 aaKnown RBP9.6□□□□□ -0.87
RIF1-205ENST00000444746 CEP89Q96ST8 783 aa9.6□□□□□ -0.87
RIF1-205ENST00000444746 TSR1Q2NL82 804 aaKnown RBP9.6□□□□□ -0.87
RIF1-205ENST00000444746 IGHDP01880 384 aa9.6□□□□□ -0.87
RIF1-205ENST00000444746 CCDC82Q8N4S0 544 aa9.6□□□□□ -0.87
RIF1-205ENST00000444746 CC2D2AQ9P2K1 1620 aa9.6□□□□□ -0.87
RIF1-205ENST00000444746 DISP3Q9P2K9 1392 aa9.59□□□□□ -0.87
RIF1-205ENST00000444746 BOLA2Q9H3K6 86 aa9.59□□□□□ -0.87
RIF1-205ENST00000444746 NCKAP5LQ9HCH0 1330 aa9.59□□□□□ -0.87
RIF1-205ENST00000444746 HFM1A2PYH4 1435 aa9.59□□□□□ -0.87
RIF1-205ENST00000444746 IBSPP21815 317 aaPredicted RBP9.59□□□□□ -0.87
RIF1-205ENST00000444746 TNNT3P45378 269 aaPredicted RBP9.59□□□□□ -0.87
RIF1-205ENST00000444746 RBM5P52756 815 aaKnown RBP eCLIP9.59□□□□□ -0.872e-8■■■□□ 16.5
RIF1-205ENST00000444746 FAM177A1Q8N128 213 aaPredicted RBP9.59□□□□□ -0.87
RIF1-205ENST00000444746 NINLQ9Y2I6 1382 aa9.59□□□□□ -0.87
RIF1-205ENST00000444746 DTNBO60941 627 aa9.58□□□□□ -0.88
RIF1-205ENST00000444746 NFE2L2Q16236 605 aa9.58□□□□□ -0.88
RIF1-205ENST00000444746 ABCC5O15440 1437 aa9.58□□□□□ -0.88
RIF1-205ENST00000444746 IDI1Q13907 227 aa9.58□□□□□ -0.88
RIF1-205ENST00000444746 ZNF771Q7L3S4 317 aaPredicted RBP9.58□□□□□ -0.88
RIF1-205ENST00000444746 THEMISQ8N1K5 641 aaPredicted RBP9.58□□□□□ -0.88
RIF1-205ENST00000444746 GOLGA6L1Q8N7Z2 621 aa9.58□□□□□ -0.88
RIF1-205ENST00000444746 TRIM5Q9C035 493 aa9.58□□□□□ -0.88
RIF1-205ENST00000444746 GPTP24298 496 aa9.58□□□□□ -0.88
RIF1-205ENST00000444746 CCDC158Q5M9N0 1113 aa9.58□□□□□ -0.88
RIF1-205ENST00000444746 ATP5J2-PTCD1G3V325 749 aa9.58□□□□□ -0.88
RIF1-205ENST00000444746 TAF7Q15545 349 aaPredicted RBP9.58□□□□□ -0.88
RIF1-205ENST00000444746 TIAM1Q13009 1591 aa9.58□□□□□ -0.88
RIF1-205ENST00000444746 IDH1O75874 414 aaKnown RBP9.58□□□□□ -0.88
RIF1-205ENST00000444746 CCDC83Q8IWF9 413 aa9.58□□□□□ -0.88
RIF1-205ENST00000444746 GCC1Q96CN9 775 aa9.58□□□□□ -0.88
RIF1-205ENST00000444746 TBC1D2BQ9UPU7 963 aa9.58□□□□□ -0.88
RIF1-205ENST00000444746 PDE3AQ14432 1141 aa9.58□□□□□ -0.88
RIF1-205ENST00000444746 SAFBQ15424 915 aaKnown RBP eCLIP9.58□□□□□ -0.884e-7■□□□□ 10.5
RIF1-205ENST00000444746 PRPF40BQ6NWY9 871 aaKnown RBP9.58□□□□□ -0.88
RIF1-205ENST00000444746 FAM43AQ8N2R8 423 aa9.58□□□□□ -0.88
RIF1-205ENST00000444746 ZHX3Q9H4I2 956 aa9.58□□□□□ -0.88
RIF1-205ENST00000444746 GDPD2Q9HCC8 539 aa9.57□□□□□ -0.88
RIF1-205ENST00000444746 CWC22Q9HCG8 908 aaKnown RBP9.57□□□□□ -0.88
RIF1-205ENST00000444746 RARSP54136 660 aaKnown RBP9.57□□□□□ -0.88
RIF1-205ENST00000444746 TPM2P07951 284 aa9.57□□□□□ -0.88
RIF1-205ENST00000444746 ANKLE2Q86XL3 938 aa9.57□□□□□ -0.88
RIF1-205ENST00000444746 TMX1Q9H3N1 280 aa9.57□□□□□ -0.88
RIF1-205ENST00000444746 ZBTB3Q9H5J0 574 aa9.57□□□□□ -0.88
RIF1-205ENST00000444746 AMOTL2Q9Y2J4 779 aa9.57□□□□□ -0.88
RIF1-205ENST00000444746 LRRFIP1Q32MZ4 808 aaKnown RBP9.57□□□□□ -0.88
RIF1-205ENST00000444746 GNAT3A8MTJ3 354 aa9.57□□□□□ -0.88
RIF1-205ENST00000444746 K7ELQ4 463 aaPredicted RBP9.57□□□□□ -0.88
RIF1-205ENST00000444746 WDR63Q8IWG1 891 aa9.57□□□□□ -0.88
RIF1-205ENST00000444746 PDRG1Q9NUG6 133 aa9.57□□□□□ -0.88
RIF1-205ENST00000444746 RAI14Q9P0K7 980 aa9.57□□□□□ -0.88
RIF1-205ENST00000444746 SMG6Q86US8 1419 aaKnown RBP9.56□□□□□ -0.88
RIF1-205ENST00000444746 TSPY26PQ9H489 355 aa9.56□□□□□ -0.88
RIF1-205ENST00000444746 EPRSP07814 1512 aaKnown RBP9.56□□□□□ -0.88
RIF1-205ENST00000444746 SNRKQ9NRH2 765 aa9.56□□□□□ -0.88
RIF1-205ENST00000444746 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.56□□□□□ -0.88
RIF1-205ENST00000444746 EHBP1L1Q8N3D4 1523 aa9.56□□□□□ -0.88
RIF1-205ENST00000444746 KRT24Q2M2I5 525 aa9.56□□□□□ -0.88
RIF1-205ENST00000444746 SPG7Q9UQ90 795 aa9.56□□□□□ -0.88
RIF1-205ENST00000444746 STK38Q15208 465 aa9.56□□□□□ -0.88
RIF1-205ENST00000444746 ABCF2Q9UG63 623 aa9.56□□□□□ -0.88
RIF1-205ENST00000444746 CYP46A1Q9Y6A2 500 aa9.56□□□□□ -0.88
RIF1-205ENST00000444746 PCF11O94913 1555 aaKnown RBP9.56□□□□□ -0.88
RIF1-205ENST00000444746 PSMA5P28066 241 aa9.56□□□□□ -0.88
RIF1-205ENST00000444746 TPM1P09493 284 aa9.56□□□□□ -0.88
RIF1-205ENST00000444746 CASTP20810 708 aaKnown RBP9.55□□□□□ -0.88
RIF1-205ENST00000444746 CCDC57Q2TAC2 916 aa9.55□□□□□ -0.88
RIF1-205ENST00000444746 LRRFIP2Q9Y608 721 aaKnown RBP9.55□□□□□ -0.88
RIF1-205ENST00000444746 ERICH3Q5RHP9 1530 aa9.55□□□□□ -0.88
RIF1-205ENST00000444746 ZNF692Q9BU19 519 aaPredicted RBP9.55□□□□□ -0.88
RIF1-205ENST00000444746 CCT4P50991 539 aaKnown RBP9.55□□□□□ -0.88
RIF1-205ENST00000444746 CCDC144CPQ8IYA2 1237 aa9.55□□□□□ -0.88
RIF1-205ENST00000444746 CCDC43Q96MW1 224 aaKnown RBP9.55□□□□□ -0.88
RIF1-205ENST00000444746 IFT140Q96RY7 1462 aa9.55□□□□□ -0.88
RIF1-205ENST00000444746 LARP1BQ659C4 914 aaKnown RBP9.55□□□□□ -0.88
RIF1-205ENST00000444746 CABLES1Q8TDN4 633 aa9.54□□□□□ -0.88
RIF1-205ENST00000444746 MPHOSPH8Q99549 860 aa9.54□□□□□ -0.88
RIF1-205ENST00000444746 SSFA2P28290 1259 aa9.54□□□□□ -0.88
RIF1-205ENST00000444746 TRMT1LQ7Z2T5 733 aaKnown RBP9.54□□□□□ -0.88
RIF1-205ENST00000444746 C16orf71Q8IYS4 520 aaPredicted RBP9.54□□□□□ -0.88
RIF1-205ENST00000444746 ZBTB9Q96C00 473 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms