RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 EZH2Q15910 746 aaKnown RBP33.38■■■□□ 2.93
TMEM238-201ENST00000444469 PARP4Q9UKK3 1724 aaKnown RBP33.38■■■□□ 2.93
TMEM238-201ENST00000444469 DDB1Q16531 1140 aa33.37■■■□□ 2.93
TMEM238-201ENST00000444469 AXIN2Q9Y2T1 843 aa33.36■■■□□ 2.93
TMEM238-201ENST00000444469 PARD3Q8TEW0 1356 aa33.35■■■□□ 2.93
TMEM238-201ENST00000444469 PUS7Q96PZ0 661 aaKnown RBP33.35■■■□□ 2.93
TMEM238-201ENST00000444469 CDCA7Q9BWT1 371 aaPredicted RBP33.35■■■□□ 2.93
TMEM238-201ENST00000444469 SLC12A5Q9H2X9 1139 aa33.35■■■□□ 2.93
TMEM238-201ENST00000444469 COL18A1P39060 1754 aa33.34■■■□□ 2.93
TMEM238-201ENST00000444469 OVOS2A0A0G2JMS6 1433 aa33.33■■■□□ 2.93
TMEM238-201ENST00000444469 OVOS2A0A0J9YW53 1432 aa33.33■■■□□ 2.93
TMEM238-201ENST00000444469 OVOS2Q6IE36 1432 aa33.33■■■□□ 2.93
TMEM238-201ENST00000444469 NME9Q86XW9 330 aa33.32■■■□□ 2.92
TMEM238-201ENST00000444469 CAMKK2Q96RR4 588 aa33.32■■■□□ 2.92
TMEM238-201ENST00000444469 USP31Q70CQ4 1352 aa33.32■■■□□ 2.92
TMEM238-201ENST00000444469 EDC4Q6P2E9 1401 aaKnown RBP33.31■■■□□ 2.92
TMEM238-201ENST00000444469 R3HDM1Q15032 1099 aaKnown RBP33.31■■■□□ 2.92
TMEM238-201ENST00000444469 NFAT5O94916 1531 aa33.31■■■□□ 2.92
TMEM238-201ENST00000444469 CD163L1Q9NR16 1453 aa33.31■■■□□ 2.92
TMEM238-201ENST00000444469 ST20-MTHFSA0A0A6YYL1 179 aa33.3■■■□□ 2.92
TMEM238-201ENST00000444469 CARD10Q9BWT7 1032 aa33.3■■■□□ 2.92
TMEM238-201ENST00000444469 NINLQ9Y2I6 1382 aa33.29■■■□□ 2.92
TMEM238-201ENST00000444469 ABCC6O95255 1503 aa33.28■■■□□ 2.92
TMEM238-201ENST00000444469 LRRC37A3O60309 1634 aa33.28■■■□□ 2.92
TMEM238-201ENST00000444469 A0A1W2PP64 1363 aa33.27■■■□□ 2.92
TMEM238-201ENST00000444469 NBPF14Q5TI25 921 aa33.26■■■□□ 2.91
TMEM238-201ENST00000444469 CCDC7Q96M83 1385 aa33.25■■■□□ 2.91
TMEM238-201ENST00000444469 RGPD5Q99666 1765 aa33.24■■■□□ 2.91
TMEM238-201ENST00000444469 LRP5O75197 1615 aa33.24■■■□□ 2.91
TMEM238-201ENST00000444469 TESK2Q96S53 571 aa33.23■■■□□ 2.91
TMEM238-201ENST00000444469 USP54Q70EL1 1684 aa33.23■■■□□ 2.91
TMEM238-201ENST00000444469 WNK3Q9BYP7 1800 aa33.22■■■□□ 2.91
TMEM238-201ENST00000444469 SRCAPQ6ZRS2 3230 aa33.22■■■□□ 2.91
TMEM238-201ENST00000444469 EXOC5O00471 708 aa33.21■■■□□ 2.91
TMEM238-201ENST00000444469 NLRP2Q9NX02 1062 aa33.2■■■□□ 2.91
TMEM238-201ENST00000444469 TMF1P82094 1093 aa33.19■■■□□ 2.9
TMEM238-201ENST00000444469 ERBB3P21860 1342 aa33.17■■■□□ 2.9
TMEM238-201ENST00000444469 USP47Q96K76 1375 aa33.17■■■□□ 2.9
TMEM238-201ENST00000444469 RREB1Q92766 1687 aa33.17■■■□□ 2.9
TMEM238-201ENST00000444469 COG3Q96JB2 828 aa33.16■■■□□ 2.9
TMEM238-201ENST00000444469 PEAK1Q9H792 1746 aa33.16■■■□□ 2.9
TMEM238-201ENST00000444469 LTN1O94822 1766 aa33.16■■■□□ 2.9
TMEM238-201ENST00000444469 MARCH10Q8NA82 808 aaPredicted RBP33.15■■■□□ 2.9
TMEM238-201ENST00000444469 BCL11BQ9C0K0 894 aaPredicted RBP33.15■■■□□ 2.9
TMEM238-201ENST00000444469 ANKRD24Q8TF21 1146 aa33.14■■■□□ 2.9
TMEM238-201ENST00000444469 CDCA8Q53HL2 280 aa33.12■■■□□ 2.89
TMEM238-201ENST00000444469 NUP188Q5SRE5 1749 aa33.11■■■□□ 2.89
TMEM238-201ENST00000444469 ANKRD36BQ8N2N9 1353 aa33.1■■■□□ 2.89
TMEM238-201ENST00000444469 PLSCR1O15162 318 aa33.1■■■□□ 2.89
TMEM238-201ENST00000444469 PCGF6Q9BYE7 350 aa33.1■■■□□ 2.89
TMEM238-201ENST00000444469 TNS2Q63HR2 1409 aa33.1■■■□□ 2.89
TMEM238-201ENST00000444469 IL2RBP14784 551 aa33.09■■■□□ 2.89
TMEM238-201ENST00000444469 BCL9O00512 1426 aa33.09■■■□□ 2.89
TMEM238-201ENST00000444469 TIMELESSQ9UNS1 1208 aa33.08■■■□□ 2.89
TMEM238-201ENST00000444469 SBF2Q86WG5 1849 aa33.07■■■□□ 2.89
TMEM238-201ENST00000444469 IP6K1Q92551 441 aa33.06■■■□□ 2.88
TMEM238-201ENST00000444469 AMPHP49418 695 aa33.05■■■□□ 2.88
TMEM238-201ENST00000444469 LTV1Q96GA3 475 aaPredicted RBP33.05■■■□□ 2.88
TMEM238-201ENST00000444469 RGPD3A6NKT7 1758 aaPredicted RBP33.05■■■□□ 2.88
TMEM238-201ENST00000444469 RGPD4Q7Z3J3 1758 aa33.05■■■□□ 2.88
TMEM238-201ENST00000444469 CLSPNQ9HAW4 1339 aa33.03■■■□□ 2.88
TMEM238-201ENST00000444469 PTF1AQ7RTS3 328 aa33■■■□□ 2.87
TMEM238-201ENST00000444469 MAP3K19Q56UN5 1328 aa32.99■■■□□ 2.87
TMEM238-201ENST00000444469 FAM208AQ9UK61 1670 aaKnown RBP32.97■■■□□ 2.87
TMEM238-201ENST00000444469 ACSBG1Q96GR2 724 aa32.96■■■□□ 2.87
TMEM238-201ENST00000444469 HOXC9P31274 260 aa32.95■■■□□ 2.87
TMEM238-201ENST00000444469 GGNBP2Q9H3C7 697 aa32.95■■■□□ 2.87
TMEM238-201ENST00000444469 SPON1Q9HCB6 807 aa32.95■■■□□ 2.87
TMEM238-201ENST00000444469 PPP1R1BQ9UD71 204 aaPredicted RBP32.94■■■□□ 2.86
TMEM238-201ENST00000444469 FYB1O15117 783 aa32.92■■■□□ 2.86
TMEM238-201ENST00000444469 KCNQ2O43526 872 aa32.92■■■□□ 2.86
TMEM238-201ENST00000444469 TXNRD1Q16881 649 aa32.92■■■□□ 2.86
TMEM238-201ENST00000444469 STK32BQ9NY57 414 aa32.92■■■□□ 2.86
TMEM238-201ENST00000444469 RTL1A6NKG5 1358 aa32.92■■■□□ 2.86
TMEM238-201ENST00000444469 NHSQ6T4R5 1651 aa32.91■■■□□ 2.86
TMEM238-201ENST00000444469 FBLN1P23142 703 aa32.9■■■□□ 2.86
TMEM238-201ENST00000444469 DDX54Q8TDD1 881 aaKnown RBP32.9■■■□□ 2.86
TMEM238-201ENST00000444469 SMG6Q86US8 1419 aaKnown RBP32.9■■■□□ 2.86
TMEM238-201ENST00000444469 ANO8Q9HCE9 1232 aaPredicted RBP32.89■■■□□ 2.86
TMEM238-201ENST00000444469 RRS1Q15050 365 aaKnown RBP32.88■■■□□ 2.85
TMEM238-201ENST00000444469 PROM2Q8N271 834 aa32.87■■■□□ 2.85
TMEM238-201ENST00000444469 KIF20BQ96Q89 1820 aa32.84■■■□□ 2.85
TMEM238-201ENST00000444469 CCER1Q8TC90 406 aaPredicted RBP32.83■■■□□ 2.85
TMEM238-201ENST00000444469 POLR3GLQ9BT43 218 aa32.83■■■□□ 2.85
TMEM238-201ENST00000444469 NSD3Q9BZ95 1437 aa32.82■■■□□ 2.84
TMEM238-201ENST00000444469 SLC15A2Q16348 729 aa32.8■■■□□ 2.84
TMEM238-201ENST00000444469 ZCRB1Q8TBF4 217 aaKnown RBP32.8■■■□□ 2.84
TMEM238-201ENST00000444469 RAPGEF4Q8WZA2 1011 aa32.79■■■□□ 2.84
TMEM238-201ENST00000444469 SYTL4Q96C24 671 aaPredicted RBP32.79■■■□□ 2.84
TMEM238-201ENST00000444469 DCAF8L1A6NGE4 600 aa32.77■■■□□ 2.84
TMEM238-201ENST00000444469 FLT4P35916 1363 aa32.77■■■□□ 2.84
TMEM238-201ENST00000444469 MYOM1P52179 1685 aa32.77■■■□□ 2.84
TMEM238-201ENST00000444469 KIF24Q5T7B8 1368 aa32.76■■■□□ 2.83
TMEM238-201ENST00000444469 BTAF1O14981 1849 aa32.76■■■□□ 2.83
TMEM238-201ENST00000444469 KAT6BQ8WYB5 2073 aa32.76■■■□□ 2.83
TMEM238-201ENST00000444469 INSRP06213 1382 aa32.75■■■□□ 2.83
TMEM238-201ENST00000444469 NBPF6Q5VWK0 638 aa32.75■■■□□ 2.83
TMEM238-201ENST00000444469 NBPF4Q96M43 638 aa32.75■■■□□ 2.83
TMEM238-201ENST00000444469 CARD14Q9BXL6 1004 aa32.75■■■□□ 2.83
TMEM238-201ENST00000444469 CGNL1Q0VF96 1302 aa32.75■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms