RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 DDX11L8A8MPP1 907 aa23.76■■□□□ 1.39
PMPCB-204ENST00000444457 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.76■■□□□ 1.39
PMPCB-204ENST00000444457 PPIP5K1Q6PFW1 1433 aa23.76■■□□□ 1.39
PMPCB-204ENST00000444457 WASLO00401 505 aaPredicted RBP23.75■■□□□ 1.39
PMPCB-204ENST00000444457 PDZRN3Q9UPQ7 1066 aa23.75■■□□□ 1.39
PMPCB-204ENST00000444457 TRIM27P14373 513 aa23.74■■□□□ 1.39
PMPCB-204ENST00000444457 FBLN1P23142 703 aa23.74■■□□□ 1.39
PMPCB-204ENST00000444457 SPRYD3Q8NCJ5 442 aa23.74■■□□□ 1.39
PMPCB-204ENST00000444457 PRKAR2BP31323 418 aa23.73■■□□□ 1.39
PMPCB-204ENST00000444457 MON2Q7Z3U7 1717 aa23.72■■□□□ 1.39
PMPCB-204ENST00000444457 ATF7IPQ6VMQ6 1270 aa23.72■■□□□ 1.39
PMPCB-204ENST00000444457 PDCL3Q9H2J4 239 aa23.71■■□□□ 1.39
PMPCB-204ENST00000444457 TECPR2O15040 1411 aa23.7■■□□□ 1.39
PMPCB-204ENST00000444457 CPS1P31327 1500 aa23.7■■□□□ 1.39
PMPCB-204ENST00000444457 TXNDC2Q86VQ3 553 aa23.7■■□□□ 1.38
PMPCB-204ENST00000444457 ZNF692Q9BU19 519 aaPredicted RBP23.7■■□□□ 1.38
PMPCB-204ENST00000444457 ESF1Q9H501 851 aaKnown RBP23.7■■□□□ 1.38
PMPCB-204ENST00000444457 NCOA3Q9Y6Q9 1424 aa23.7■■□□□ 1.38
PMPCB-204ENST00000444457 NOB1Q9ULX3 412 aaKnown RBP23.7■■□□□ 1.38
PMPCB-204ENST00000444457 DDX19BQ9UMR2 479 aa23.7■■□□□ 1.38
PMPCB-204ENST00000444457 CDK12Q9NYV4 1490 aaPredicted RBP23.69■■□□□ 1.38
PMPCB-204ENST00000444457 AKAP12Q02952 1782 aa23.69■■□□□ 1.38
PMPCB-204ENST00000444457 TRIM44Q96DX7 344 aaPredicted RBP23.69■■□□□ 1.38
PMPCB-204ENST00000444457 NME9Q86XW9 330 aa23.69■■□□□ 1.38
PMPCB-204ENST00000444457 EMILIN1Q9Y6C2 1016 aa23.69■■□□□ 1.38
PMPCB-204ENST00000444457 ITSN1Q15811 1721 aa23.68■■□□□ 1.38
PMPCB-204ENST00000444457 KIF16BQ96L93 1317 aa23.68■■□□□ 1.38
PMPCB-204ENST00000444457 ITPRIPQ8IWB1 547 aa23.68■■□□□ 1.38
PMPCB-204ENST00000444457 C22orf23Q9BZE7 217 aa23.68■■□□□ 1.38
PMPCB-204ENST00000444457 AATKQ6ZMQ8 1374 aa23.67■■□□□ 1.38
PMPCB-204ENST00000444457 NUDT16Q96DE0 195 aaKnown RBP23.67■■□□□ 1.38
PMPCB-204ENST00000444457 SIRT1Q96EB6 747 aa23.67■■□□□ 1.38
PMPCB-204ENST00000444457 C3P01024 1663 aa23.66■■□□□ 1.38
PMPCB-204ENST00000444457 DDIT3P35638 169 aa23.66■■□□□ 1.38
PMPCB-204ENST00000444457 NFE2L2Q16236 605 aa23.66■■□□□ 1.38
PMPCB-204ENST00000444457 ALDH1L2Q3SY69 923 aa23.66■■□□□ 1.38
PMPCB-204ENST00000444457 UBR1Q8IWV7 1749 aa23.66■■□□□ 1.38
PMPCB-204ENST00000444457 HMOX1P09601 288 aa23.65■■□□□ 1.38
PMPCB-204ENST00000444457 HDGFP51858 240 aaKnown RBP23.65■■□□□ 1.38
PMPCB-204ENST00000444457 TNRQ92752 1358 aa23.65■■□□□ 1.38
PMPCB-204ENST00000444457 IL13P35225 146 aa23.65■■□□□ 1.38
PMPCB-204ENST00000444457 HDAC1Q13547 482 aaPredicted RBP23.65■■□□□ 1.38
PMPCB-204ENST00000444457 PHACTR3Q96KR7 559 aa23.65■■□□□ 1.38
PMPCB-204ENST00000444457 ZRANB1Q9UGI0 708 aa23.64■■□□□ 1.38
PMPCB-204ENST00000444457 CCDC61Q9Y6R9 512 aa23.64■■□□□ 1.38
PMPCB-204ENST00000444457 IPO8O15397 1037 aaKnown RBP23.64■■□□□ 1.37
PMPCB-204ENST00000444457 TMEM57Q8N5G2 664 aa23.64■■□□□ 1.37
PMPCB-204ENST00000444457 DLG5Q8TDM6 1919 aa23.63■■□□□ 1.37
PMPCB-204ENST00000444457 NCKAP5LQ9HCH0 1330 aa23.63■■□□□ 1.37
PMPCB-204ENST00000444457 GAS2L3Q86XJ1 694 aa23.62■■□□□ 1.37
PMPCB-204ENST00000444457 HSCBQ8IWL3 235 aa23.62■■□□□ 1.37
PMPCB-204ENST00000444457 ZNF428Q96B54 188 aa23.62■■□□□ 1.37
PMPCB-204ENST00000444457 COG3Q96JB2 828 aa23.62■■□□□ 1.37
PMPCB-204ENST00000444457 TMEM2Q9UHN6 1383 aa23.61■■□□□ 1.37
PMPCB-204ENST00000444457 CALD1Q05682 793 aaKnown RBP23.6■■□□□ 1.37
PMPCB-204ENST00000444457 ZBTB40Q9NUA8 1239 aa23.6■■□□□ 1.37
PMPCB-204ENST00000444457 BRPF1P55201 1214 aaPredicted RBP23.59■■□□□ 1.37
PMPCB-204ENST00000444457 MFAP1P55081 439 aaKnown RBP23.59■■□□□ 1.37
PMPCB-204ENST00000444457 THUMPD2Q9BTF0 503 aaKnown RBP23.59■■□□□ 1.37
PMPCB-204ENST00000444457 PRR36Q9H6K5 1346 aa23.58■■□□□ 1.37
PMPCB-204ENST00000444457 KIAA1211Q6ZU35 1233 aa23.58■■□□□ 1.37
PMPCB-204ENST00000444457 RRS1Q15050 365 aaKnown RBP23.57■■□□□ 1.36
PMPCB-204ENST00000444457 SKOR2Q2VWA4 1001 aaPredicted RBP23.57■■□□□ 1.36
PMPCB-204ENST00000444457 SMC5Q8IY18 1101 aa23.57■■□□□ 1.36
PMPCB-204ENST00000444457 IFT57Q9NWB7 429 aa23.57■■□□□ 1.36
PMPCB-204ENST00000444457 ROBO2Q9HCK4 1378 aa23.57■■□□□ 1.36
PMPCB-204ENST00000444457 ADAMTS13Q76LX8 1427 aa23.57■■□□□ 1.36
PMPCB-204ENST00000444457 GNAI1P63096 354 aa23.56■■□□□ 1.36
PMPCB-204ENST00000444457 CIZ1Q9ULV3 898 aaPredicted RBP23.56■■□□□ 1.36
PMPCB-204ENST00000444457 TNPO1Q92973 898 aaKnown RBP23.56■■□□□ 1.36
PMPCB-204ENST00000444457 NRKQ7Z2Y5 1582 aa23.55■■□□□ 1.36
PMPCB-204ENST00000444457 PTMSP20962 102 aa23.55■■□□□ 1.36
PMPCB-204ENST00000444457 CCDC173Q0VFZ6 552 aa23.55■■□□□ 1.36
PMPCB-204ENST00000444457 PPP1R9BQ96SB3 815 aa23.55■■□□□ 1.36
PMPCB-204ENST00000444457 TOPAZ1Q8N9V7 1692 aa23.55■■□□□ 1.36
PMPCB-204ENST00000444457 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.55■■□□□ 1.36
PMPCB-204ENST00000444457 VAMP4O75379 141 aa23.55■■□□□ 1.36
PMPCB-204ENST00000444457 ZNF853P0CG23 659 aa23.55■■□□□ 1.36
PMPCB-204ENST00000444457 SNX21Q969T3 373 aa23.55■■□□□ 1.36
PMPCB-204ENST00000444457 GBP4Q96PP9 640 aa23.54■■□□□ 1.36
PMPCB-204ENST00000444457 TERF1P54274 439 aa23.54■■□□□ 1.36
PMPCB-204ENST00000444457 PTCH1Q13635 1447 aa23.53■■□□□ 1.36
PMPCB-204ENST00000444457 OFD1O75665 1012 aa23.52■■□□□ 1.36
PMPCB-204ENST00000444457 LMOD3Q0VAK6 560 aa23.52■■□□□ 1.36
PMPCB-204ENST00000444457 MRPL50Q8N5N7 158 aaKnown RBP23.52■■□□□ 1.36
PMPCB-204ENST00000444457 TSPYL6Q8N831 410 aa23.52■■□□□ 1.36
PMPCB-204ENST00000444457 MBIPQ9NS73 344 aa23.52■■□□□ 1.36
PMPCB-204ENST00000444457 ZSCAN30Q86W11 494 aa23.52■■□□□ 1.36
PMPCB-204ENST00000444457 RAB3GAP1Q15042 981 aa23.51■■□□□ 1.35
PMPCB-204ENST00000444457 PIK3R4Q99570 1358 aa23.51■■□□□ 1.35
PMPCB-204ENST00000444457 RBM25P49756 843 aaKnown RBP23.5■■□□□ 1.35
PMPCB-204ENST00000444457 ARHGAP45Q92619 1136 aa23.5■■□□□ 1.35
PMPCB-204ENST00000444457 PLEKHG1Q9ULL1 1385 aa23.5■■□□□ 1.35
PMPCB-204ENST00000444457 CFAP44Q96MT7 982 aa23.49■■□□□ 1.35
PMPCB-204ENST00000444457 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.48■■□□□ 1.35
PMPCB-204ENST00000444457 TTC21BQ7Z4L5 1316 aa23.48■■□□□ 1.35
PMPCB-204ENST00000444457 IBTKQ9P2D0 1353 aaPredicted RBP23.48■■□□□ 1.35
PMPCB-204ENST00000444457 NALCNQ8IZF0 1738 aa23.47■■□□□ 1.35
PMPCB-204ENST00000444457 OVOS2A0A0J9YW53 1432 aa23.47■■□□□ 1.35
PMPCB-204ENST00000444457 OVOS2Q6IE36 1432 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms