RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 EVA1CP58658 441 aa15.38■□□□□ 0.05
SF3A1-203ENST00000444440 RREB1Q92766 1687 aa15.38■□□□□ 0.05
SF3A1-203ENST00000444440 USP31Q70CQ4 1352 aa15.37■□□□□ 0.05
SF3A1-203ENST00000444440 OVOS2A0A0J9YW53 1432 aa15.37■□□□□ 0.05
SF3A1-203ENST00000444440 CRB1P82279 1406 aa15.37■□□□□ 0.05
SF3A1-203ENST00000444440 OVOS2Q6IE36 1432 aa15.37■□□□□ 0.05
SF3A1-203ENST00000444440 ARHGEF25Q86VW2 580 aa15.37■□□□□ 0.05
SF3A1-203ENST00000444440 CCDC125Q86Z20 511 aa15.37■□□□□ 0.05
SF3A1-203ENST00000444440 ABCC6O95255 1503 aa15.37■□□□□ 0.05
SF3A1-203ENST00000444440 BARGINQ6ZT62 677 aa15.36■□□□□ 0.05
SF3A1-203ENST00000444440 NUP188Q5SRE5 1749 aa15.35■□□□□ 0.05
SF3A1-203ENST00000444440 PUS7Q96PZ0 661 aaKnown RBP15.35■□□□□ 0.05
SF3A1-203ENST00000444440 CLSPNQ9HAW4 1339 aa15.35■□□□□ 0.05
SF3A1-203ENST00000444440 TCP11L2Q8N4U5 519 aa15.34■□□□□ 0.05
SF3A1-203ENST00000444440 FAM208AQ9UK61 1670 aaKnown RBP15.33■□□□□ 0.04
SF3A1-203ENST00000444440 HDGFL2Q7Z4V5 671 aaPredicted RBP15.33■□□□□ 0.04
SF3A1-203ENST00000444440 KCNH5Q8NCM2 988 aa15.32■□□□□ 0.04
SF3A1-203ENST00000444440 WDR17Q8IZU2 1322 aa15.32■□□□□ 0.04
SF3A1-203ENST00000444440 NINLQ9Y2I6 1382 aa15.32■□□□□ 0.04
SF3A1-203ENST00000444440 DISP2A7MBM2 1401 aa15.31■□□□□ 0.04
SF3A1-203ENST00000444440 SHANK3Q9BYB0 1731 aa15.31■□□□□ 0.04
SF3A1-203ENST00000444440 ANKRD36BQ8N2N9 1353 aa15.3■□□□□ 0.04
SF3A1-203ENST00000444440 TERF2IPQ9NYB0 399 aa15.3■□□□□ 0.04
SF3A1-203ENST00000444440 THRAP3Q9Y2W1 955 aaKnown RBP15.3■□□□□ 0.04
SF3A1-203ENST00000444440 RGPD3A6NKT7 1758 aaPredicted RBP15.29■□□□□ 0.04
SF3A1-203ENST00000444440 RGPD4Q7Z3J3 1758 aa15.29■□□□□ 0.04
SF3A1-203ENST00000444440 EN1Q05925 392 aaPredicted RBP15.29■□□□□ 0.04
SF3A1-203ENST00000444440 SF3B2Q13435 895 aaKnown RBP15.29■□□□□ 0.04
SF3A1-203ENST00000444440 TOM1L2Q6ZVM7 507 aa15.29■□□□□ 0.04
SF3A1-203ENST00000444440 TIMELESSQ9UNS1 1208 aa15.29■□□□□ 0.04
SF3A1-203ENST00000444440 MAP2P11137 1827 aaKnown RBP15.29■□□□□ 0.04
SF3A1-203ENST00000444440 ANKRD26Q9UPS8 1709 aa15.29■□□□□ 0.04
SF3A1-203ENST00000444440 TRIM37O94972 964 aa15.28■□□□□ 0.04
SF3A1-203ENST00000444440 FBLN1P23142 703 aa15.28■□□□□ 0.04
SF3A1-203ENST00000444440 TMF1P82094 1093 aa15.28■□□□□ 0.04
SF3A1-203ENST00000444440 KAT6BQ8WYB5 2073 aa15.28■□□□□ 0.04
SF3A1-203ENST00000444440 ERBB3P21860 1342 aa15.26■□□□□ 0.03
SF3A1-203ENST00000444440 BAG6P46379 1132 aa15.26■□□□□ 0.03
SF3A1-203ENST00000444440 PDE3BQ13370 1112 aa15.26■□□□□ 0.03
SF3A1-203ENST00000444440 FAM196AQ6ZSG2 479 aa15.26■□□□□ 0.03
SF3A1-203ENST00000444440 CCER1Q8TC90 406 aaPredicted RBP15.26■□□□□ 0.03
SF3A1-203ENST00000444440 NHSQ6T4R5 1651 aa15.25■□□□□ 0.03
SF3A1-203ENST00000444440 EZH2Q15910 746 aaKnown RBP15.25■□□□□ 0.03
SF3A1-203ENST00000444440 CARD10Q9BWT7 1032 aa15.25■□□□□ 0.03
SF3A1-203ENST00000444440 CSB-PGBD3P0DP91 1061 aa15.24■□□□□ 0.03
SF3A1-203ENST00000444440 OVOS2A0A0G2JMS6 1433 aa15.24■□□□□ 0.03
SF3A1-203ENST00000444440 LRP5O75197 1615 aa15.24■□□□□ 0.03
SF3A1-203ENST00000444440 BTAF1O14981 1849 aa15.23■□□□□ 0.03
SF3A1-203ENST00000444440 PTF1AQ7RTS3 328 aa15.23■□□□□ 0.03
SF3A1-203ENST00000444440 CAMKK2Q96RR4 588 aa15.23■□□□□ 0.03
SF3A1-203ENST00000444440 TNS2Q63HR2 1409 aa15.23■□□□□ 0.03
SF3A1-203ENST00000444440 FYB1O15117 783 aa15.22■□□□□ 0.03
SF3A1-203ENST00000444440 SLC24A1O60721 1099 aa15.22■□□□□ 0.03
SF3A1-203ENST00000444440 DDB1Q16531 1140 aa15.22■□□□□ 0.03
SF3A1-203ENST00000444440 MARCH10Q8NA82 808 aaPredicted RBP15.22■□□□□ 0.03
SF3A1-203ENST00000444440 CARD14Q9BXL6 1004 aa15.22■□□□□ 0.03
SF3A1-203ENST00000444440 GGNBP2Q9H3C7 697 aa15.22■□□□□ 0.03
SF3A1-203ENST00000444440 CCDC7Q96M83 1385 aa15.22■□□□□ 0.03
SF3A1-203ENST00000444440 MAP3K19Q56UN5 1328 aa15.21■□□□□ 0.03
SF3A1-203ENST00000444440 DOT1LQ8TEK3 1739 aa15.21■□□□□ 0.03
SF3A1-203ENST00000444440 PSDA5PKW4 1024 aaPredicted RBP15.21■□□□□ 0.03
SF3A1-203ENST00000444440 ANKRD24Q8TF21 1146 aa15.21■□□□□ 0.03
SF3A1-203ENST00000444440 COG3Q96JB2 828 aa15.21■□□□□ 0.03
SF3A1-203ENST00000444440 NSD3Q9BZ95 1437 aa15.2■□□□□ 0.02
SF3A1-203ENST00000444440 APBA3O96018 575 aa15.2■□□□□ 0.02
SF3A1-203ENST00000444440 IP6K1Q92551 441 aa15.2■□□□□ 0.02
SF3A1-203ENST00000444440 HSPA5P11021 654 aaKnown RBP15.19■□□□□ 0.02
SF3A1-203ENST00000444440 RRS1Q15050 365 aaKnown RBP15.19■□□□□ 0.02
SF3A1-203ENST00000444440 NLRP2Q9NX02 1062 aa15.19■□□□□ 0.02
SF3A1-203ENST00000444440 BCL9O00512 1426 aa15.18■□□□□ 0.02
SF3A1-203ENST00000444440 HOXC9P31274 260 aa15.18■□□□□ 0.02
SF3A1-203ENST00000444440 LTV1Q96GA3 475 aaPredicted RBP15.18■□□□□ 0.02
SF3A1-203ENST00000444440 CDCA7Q9BWT1 371 aaPredicted RBP15.17■□□□□ 0.02
SF3A1-203ENST00000444440 CASZ1Q86V15 1759 aa15.16■□□□□ 0.02
SF3A1-203ENST00000444440 R3HDM1Q15032 1099 aaKnown RBP15.16■□□□□ 0.02
SF3A1-203ENST00000444440 CDCA8Q53HL2 280 aa15.16■□□□□ 0.02
SF3A1-203ENST00000444440 MEGF6O75095 1541 aa15.16■□□□□ 0.02
SF3A1-203ENST00000444440 RTL1A6NKG5 1358 aa15.15■□□□□ 0.02
SF3A1-203ENST00000444440 PARD3Q8TEW0 1356 aa15.15■□□□□ 0.02
SF3A1-203ENST00000444440 C11orf95C9JLR9 678 aaPredicted RBP15.15■□□□□ 0.02
SF3A1-203ENST00000444440 EXOC5O00471 708 aa15.14■□□□□ 0.01
SF3A1-203ENST00000444440 IL2RBP14784 551 aa15.14■□□□□ 0.01
SF3A1-203ENST00000444440 AMPHP49418 695 aa15.14■□□□□ 0.01
SF3A1-203ENST00000444440 EIF4G2P78344 907 aaKnown RBP eCLIP15.14■□□□□ 0.01
SF3A1-203ENST00000444440 TUBGCP6Q96RT7 1819 aa15.14■□□□□ 0.01
SF3A1-203ENST00000444440 PKD1L3Q7Z443 1732 aa15.14■□□□□ 0.01
SF3A1-203ENST00000444440 ITGB4P16144 1822 aa15.13■□□□□ 0.01
SF3A1-203ENST00000444440 KCNQ2O43526 872 aa15.13■□□□□ 0.01
SF3A1-203ENST00000444440 LY75O60449 1722 aa15.13■□□□□ 0.01
SF3A1-203ENST00000444440 POLR3GLQ9BT43 218 aa15.13■□□□□ 0.01
SF3A1-203ENST00000444440 TOGARAM1Q9Y4F4 1720 aa15.13■□□□□ 0.01
SF3A1-203ENST00000444440 PAPPAQ13219 1627 aa15.13■□□□□ 0.01
SF3A1-203ENST00000444440 BCL11BQ9C0K0 894 aaPredicted RBP15.12■□□□□ 0.01
SF3A1-203ENST00000444440 PROM2Q8N271 834 aa15.11■□□□□ 0.01
SF3A1-203ENST00000444440 USHBP1Q8N6Y0 703 aa15.11■□□□□ 0.01
SF3A1-203ENST00000444440 EMILIN1Q9Y6C2 1016 aa15.11■□□□□ 0.01
SF3A1-203ENST00000444440 HSP90AB2PQ58FF8 381 aa15.1■□□□□ 0.01
SF3A1-203ENST00000444440 NBPF6Q5VWK0 638 aa15.1■□□□□ 0.01
SF3A1-203ENST00000444440 ACSBG1Q96GR2 724 aa15.1■□□□□ 0.01
SF3A1-203ENST00000444440 NBPF4Q96M43 638 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms