RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 MIS18AQ9NYP9 233 aa17.45■□□□□ 0.38
SMARCA4-204ENST00000444061 IFIT2P09913 472 aaKnown RBP17.45■□□□□ 0.38
SMARCA4-204ENST00000444061 CT47B1P0C2W7 299 aaPredicted RBP17.45■□□□□ 0.38
SMARCA4-204ENST00000444061 A0A1W2PP64 1363 aa17.45■□□□□ 0.38
SMARCA4-204ENST00000444061 WWC1Q8IX03 1113 aa17.45■□□□□ 0.38
SMARCA4-204ENST00000444061 ZCRB1Q8TBF4 217 aaKnown RBP17.45■□□□□ 0.38
SMARCA4-204ENST00000444061 ARHGAP31Q2M1Z3 1444 aa17.44■□□□□ 0.38
SMARCA4-204ENST00000444061 DDB1Q16531 1140 aa17.44■□□□□ 0.38
SMARCA4-204ENST00000444061 PANK1Q8TE04 598 aa17.44■□□□□ 0.38
SMARCA4-204ENST00000444061 FLT4P35916 1363 aa17.43■□□□□ 0.38
SMARCA4-204ENST00000444061 LRRFIP1Q32MZ4 808 aaKnown RBP17.43■□□□□ 0.38
SMARCA4-204ENST00000444061 METP08581 1390 aa17.43■□□□□ 0.38
SMARCA4-204ENST00000444061 PLXNC1O60486 1568 aa17.42■□□□□ 0.38
SMARCA4-204ENST00000444061 POLKQ9UBT6 870 aa17.42■□□□□ 0.38
SMARCA4-204ENST00000444061 GOLGA6L22H0YM25 854 aa17.42■□□□□ 0.38
SMARCA4-204ENST00000444061 BTG4Q9NY30 223 aa17.42■□□□□ 0.38
SMARCA4-204ENST00000444061 CENPQQ7L2Z9 268 aaPredicted RBP17.42■□□□□ 0.38
SMARCA4-204ENST00000444061 DDX17Q92841 729 aaKnown RBP17.42■□□□□ 0.38
SMARCA4-204ENST00000444061 FBXW7Q969H0 707 aa17.42■□□□□ 0.38
SMARCA4-204ENST00000444061 NOL10Q9BSC4 688 aaKnown RBP17.42■□□□□ 0.38
SMARCA4-204ENST00000444061 PRDM15P57071 1507 aaPredicted RBP17.42■□□□□ 0.38
SMARCA4-204ENST00000444061 SRCIN1Q9C0H9 1055 aa17.41■□□□□ 0.38
SMARCA4-204ENST00000444061 ASXL1Q8IXJ9 1541 aa17.41■□□□□ 0.38
SMARCA4-204ENST00000444061 DUSP27Q5VZP5 1158 aa17.41■□□□□ 0.38
SMARCA4-204ENST00000444061 RILPL2Q969X0 211 aa17.41■□□□□ 0.38
SMARCA4-204ENST00000444061 ARHGEF10O15013 1369 aa17.41■□□□□ 0.38
SMARCA4-204ENST00000444061 IL2RBP14784 551 aa17.41■□□□□ 0.38
SMARCA4-204ENST00000444061 PTPRTO14522 1441 aa17.41■□□□□ 0.38
SMARCA4-204ENST00000444061 PLEKHG3A1L390 1219 aa17.4■□□□□ 0.38
SMARCA4-204ENST00000444061 ZNF428Q96B54 188 aa17.4■□□□□ 0.38
SMARCA4-204ENST00000444061 IFT57Q9NWB7 429 aa17.4■□□□□ 0.38
SMARCA4-204ENST00000444061 ZNF335Q9H4Z2 1342 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-204ENST00000444061 PLEKHH1Q9ULM0 1364 aa17.4■□□□□ 0.38
SMARCA4-204ENST00000444061 COL17A1Q9UMD9 1497 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-204ENST00000444061 FMNL2Q96PY5 1086 aa17.4■□□□□ 0.38
SMARCA4-204ENST00000444061 CARD14Q9BXL6 1004 aa17.4■□□□□ 0.38
SMARCA4-204ENST00000444061 TOMM22Q9NS69 142 aa17.4■□□□□ 0.38
SMARCA4-204ENST00000444061 EIF4A2Q14240 407 aaKnown RBP17.39■□□□□ 0.38
SMARCA4-204ENST00000444061 NEUROD6Q96NK8 337 aa17.39■□□□□ 0.37
SMARCA4-204ENST00000444061 IP6K1Q92551 441 aa17.39■□□□□ 0.37
SMARCA4-204ENST00000444061 NOB1Q9ULX3 412 aaKnown RBP17.39■□□□□ 0.37
SMARCA4-204ENST00000444061 CCT4P50991 539 aaKnown RBP17.39■□□□□ 0.37
SMARCA4-204ENST00000444061 BICDL1Q6ZP65 573 aa17.39■□□□□ 0.37
SMARCA4-204ENST00000444061 HSCBQ8IWL3 235 aa17.39■□□□□ 0.37
SMARCA4-204ENST00000444061 MAP3K19Q56UN5 1328 aa17.39■□□□□ 0.37
SMARCA4-204ENST00000444061 AAMPQ13685 434 aa17.38■□□□□ 0.37
SMARCA4-204ENST00000444061 ZPR1O75312 459 aa17.38■□□□□ 0.37
SMARCA4-204ENST00000444061 ZNF652Q9Y2D9 606 aa17.38■□□□□ 0.37
SMARCA4-204ENST00000444061 EDC4Q6P2E9 1401 aaKnown RBP17.37■□□□□ 0.37
SMARCA4-204ENST00000444061 SPATA31E1Q6ZUB1 1445 aa17.37■□□□□ 0.37
SMARCA4-204ENST00000444061 TEX13AQ9BXU3 409 aaPredicted RBP17.36■□□□□ 0.37
SMARCA4-204ENST00000444061 PIK3R4Q99570 1358 aa17.36■□□□□ 0.37
SMARCA4-204ENST00000444061 HOXC9P31274 260 aa17.36■□□□□ 0.37
SMARCA4-204ENST00000444061 CDC42BPBQ9Y5S2 1711 aa17.36■□□□□ 0.37
SMARCA4-204ENST00000444061 BCL11BQ9C0K0 894 aaPredicted RBP17.36■□□□□ 0.37
SMARCA4-204ENST00000444061 SURF6O75683 361 aaKnown RBP17.35■□□□□ 0.37
SMARCA4-204ENST00000444061 MFAP1P55081 439 aaKnown RBP17.35■□□□□ 0.37
SMARCA4-204ENST00000444061 DIAPH3Q9NSV4 1193 aa17.35■□□□□ 0.37
SMARCA4-204ENST00000444061 GNAI2P04899 355 aa17.35■□□□□ 0.37
SMARCA4-204ENST00000444061 PIK3C2GO75747 1445 aa17.35■□□□□ 0.37
SMARCA4-204ENST00000444061 A2ML1A8K2U0 1454 aa17.35■□□□□ 0.37
SMARCA4-204ENST00000444061 AEBP1Q8IUX7 1158 aa17.35■□□□□ 0.37
SMARCA4-204ENST00000444061 ACSBG1Q96GR2 724 aa17.35■□□□□ 0.37
SMARCA4-204ENST00000444061 BCAR3O75815 825 aa17.34■□□□□ 0.37
SMARCA4-204ENST00000444061 GLI2P10070 1586 aa17.34■□□□□ 0.37
SMARCA4-204ENST00000444061 SLFN5Q08AF3 891 aa17.34■□□□□ 0.37
SMARCA4-204ENST00000444061 CNNM1Q9NRU3 951 aa17.34■□□□□ 0.37
SMARCA4-204ENST00000444061 TET3O43151 1660 aa17.34■□□□□ 0.37
SMARCA4-204ENST00000444061 DIP2BQ9P265 1576 aa17.34■□□□□ 0.37
SMARCA4-204ENST00000444061 ATF7IPQ6VMQ6 1270 aa17.33■□□□□ 0.37
SMARCA4-204ENST00000444061 AK7Q96M32 723 aa17.33■□□□□ 0.36
SMARCA4-204ENST00000444061 PDE3AQ14432 1141 aa17.33■□□□□ 0.36
SMARCA4-204ENST00000444061 CLASRPQ8N2M8 674 aaKnown RBP17.33■□□□□ 0.36
SMARCA4-204ENST00000444061 AMOTL1Q8IY63 956 aa17.32■□□□□ 0.36
SMARCA4-204ENST00000444061 EYA1Q99502 592 aa17.32■□□□□ 0.36
SMARCA4-204ENST00000444061 CDCA7Q9BWT1 371 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-204ENST00000444061 SMARCC1Q92922 1105 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-204ENST00000444061 ZFYVE9O95405 1425 aa17.32■□□□□ 0.36
SMARCA4-204ENST00000444061 ERC2O15083 957 aa17.32■□□□□ 0.36
SMARCA4-204ENST00000444061 AKAP4Q5JQC9 854 aa17.32■□□□□ 0.36
SMARCA4-204ENST00000444061 ROBO2Q9HCK4 1378 aa17.32■□□□□ 0.36
SMARCA4-204ENST00000444061 FAM83GA6ND36 823 aa17.31■□□□□ 0.36
SMARCA4-204ENST00000444061 ZRSR1Q15695 479 aaKnown RBP17.31■□□□□ 0.36
SMARCA4-204ENST00000444061 TPRNQ4KMQ1 711 aa17.31■□□□□ 0.36
SMARCA4-204ENST00000444061 RUFY2Q8WXA3 655 aa17.31■□□□□ 0.36
SMARCA4-204ENST00000444061 MYOM2P54296 1465 aa17.31■□□□□ 0.36
SMARCA4-204ENST00000444061 LARP1Q6PKG0 1096 aaKnown RBP17.31■□□□□ 0.36
SMARCA4-204ENST00000444061 MPHOSPH8Q99549 860 aa17.31■□□□□ 0.36
SMARCA4-204ENST00000444061 DBF4Q9UBU7 674 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-204ENST00000444061 NOP58Q9Y2X3 529 aaKnown RBP17.31■□□□□ 0.36
SMARCA4-204ENST00000444061 CCDC57Q2TAC2 916 aa17.3■□□□□ 0.36
SMARCA4-204ENST00000444061 TRIM34Q9BYJ4 488 aa17.3■□□□□ 0.36
SMARCA4-204ENST00000444061 USP21Q9UK80 565 aa17.3■□□□□ 0.36
SMARCA4-204ENST00000444061 LNPKQ9C0E8 428 aa17.29■□□□□ 0.36
SMARCA4-204ENST00000444061 SNRPA1P09661 255 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-204ENST00000444061 HSP90AB3PQ58FF7 597 aa17.29■□□□□ 0.36
SMARCA4-204ENST00000444061 GNL2Q13823 731 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-204ENST00000444061 KDM5CP41229 1560 aa17.28■□□□□ 0.36
SMARCA4-204ENST00000444061 APPP05067 770 aa17.28■□□□□ 0.36
SMARCA4-204ENST00000444061 HYPKQ9NX55 129 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms