RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 USP31Q70CQ4 1352 aa23.12■■□□□ 1.29
CTDSP1-204ENST00000443891 HDGFL2Q7Z4V5 671 aaPredicted RBP23.11■■□□□ 1.29
CTDSP1-204ENST00000443891 COL18A1P39060 1754 aa23.11■■□□□ 1.29
CTDSP1-204ENST00000443891 DDB1Q16531 1140 aa23.1■■□□□ 1.29
CTDSP1-204ENST00000443891 AXIN2Q9Y2T1 843 aa23.1■■□□□ 1.29
CTDSP1-204ENST00000443891 OVOS2A0A0G2JMS6 1433 aa23.09■■□□□ 1.29
CTDSP1-204ENST00000443891 OVOS2A0A0J9YW53 1432 aa23.09■■□□□ 1.29
CTDSP1-204ENST00000443891 OVOS2Q6IE36 1432 aa23.09■■□□□ 1.29
CTDSP1-204ENST00000443891 CARD10Q9BWT7 1032 aa23.09■■□□□ 1.29
CTDSP1-204ENST00000443891 PSDA5PKW4 1024 aaPredicted RBP23.08■■□□□ 1.29
CTDSP1-204ENST00000443891 TRIM26Q12899 539 aaPredicted RBP23.08■■□□□ 1.29
CTDSP1-204ENST00000443891 TERF2IPQ9NYB0 399 aa23.08■■□□□ 1.29
CTDSP1-204ENST00000443891 NINLQ9Y2I6 1382 aa23.07■■□□□ 1.28
CTDSP1-204ENST00000443891 MON2Q7Z3U7 1717 aa23.07■■□□□ 1.28
CTDSP1-204ENST00000443891 NFAT5O94916 1531 aa23.07■■□□□ 1.28
CTDSP1-204ENST00000443891 BCL9O00512 1426 aa23.07■■□□□ 1.28
CTDSP1-204ENST00000443891 CCDC7Q96M83 1385 aa23.06■■□□□ 1.28
CTDSP1-204ENST00000443891 EDC4Q6P2E9 1401 aaKnown RBP23.06■■□□□ 1.28
CTDSP1-204ENST00000443891 CD163L1Q9NR16 1453 aa23.05■■□□□ 1.28
CTDSP1-204ENST00000443891 CSB-PGBD3P0DP91 1061 aa23.05■■□□□ 1.28
CTDSP1-204ENST00000443891 R3HDM1Q15032 1099 aaKnown RBP23.05■■□□□ 1.28
CTDSP1-204ENST00000443891 NBPF14Q5TI25 921 aa23.05■■□□□ 1.28
CTDSP1-204ENST00000443891 TMC1Q8TDI8 760 aa23.05■■□□□ 1.28
CTDSP1-204ENST00000443891 USP54Q70EL1 1684 aa23.04■■□□□ 1.28
CTDSP1-204ENST00000443891 PLSCR1O15162 318 aa23.03■■□□□ 1.28
CTDSP1-204ENST00000443891 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.03■■□□□ 1.28
CTDSP1-204ENST00000443891 SLC12A5Q9H2X9 1139 aa23.03■■□□□ 1.28
CTDSP1-204ENST00000443891 SOX12O15370 315 aa23.02■■□□□ 1.28
CTDSP1-204ENST00000443891 BCL11BQ9C0K0 894 aaPredicted RBP23.01■■□□□ 1.27
CTDSP1-204ENST00000443891 PEAK1Q9H792 1746 aa23.01■■□□□ 1.27
CTDSP1-204ENST00000443891 LRRC37A3O60309 1634 aa23■■□□□ 1.27
CTDSP1-204ENST00000443891 EXOC5O00471 708 aa23■■□□□ 1.27
CTDSP1-204ENST00000443891 TESK2Q96S53 571 aa23■■□□□ 1.27
CTDSP1-204ENST00000443891 RREB1Q92766 1687 aa23■■□□□ 1.27
CTDSP1-204ENST00000443891 NME9Q86XW9 330 aa22.99■■□□□ 1.27
CTDSP1-204ENST00000443891 A0A1W2PP64 1363 aa22.99■■□□□ 1.27
CTDSP1-204ENST00000443891 ERBB3P21860 1342 aa22.98■■□□□ 1.27
CTDSP1-204ENST00000443891 ST20-MTHFSA0A0A6YYL1 179 aa22.97■■□□□ 1.27
CTDSP1-204ENST00000443891 MARCH10Q8NA82 808 aaPredicted RBP22.97■■□□□ 1.27
CTDSP1-204ENST00000443891 RGPD3A6NKT7 1758 aaPredicted RBP22.96■■□□□ 1.27
CTDSP1-204ENST00000443891 RGPD4Q7Z3J3 1758 aa22.96■■□□□ 1.27
CTDSP1-204ENST00000443891 WNK3Q9BYP7 1800 aa22.96■■□□□ 1.27
CTDSP1-204ENST00000443891 TIMELESSQ9UNS1 1208 aa22.94■■□□□ 1.26
CTDSP1-204ENST00000443891 NUP188Q5SRE5 1749 aa22.93■■□□□ 1.26
CTDSP1-204ENST00000443891 TNS2Q63HR2 1409 aa22.92■■□□□ 1.26
CTDSP1-204ENST00000443891 RGPD5Q99666 1765 aa22.92■■□□□ 1.26
CTDSP1-204ENST00000443891 TMF1P82094 1093 aa22.91■■□□□ 1.26
CTDSP1-204ENST00000443891 NLRP2Q9NX02 1062 aa22.91■■□□□ 1.26
CTDSP1-204ENST00000443891 SBF2Q86WG5 1849 aa22.9■■□□□ 1.26
CTDSP1-204ENST00000443891 IL2RBP14784 551 aa22.9■■□□□ 1.26
CTDSP1-204ENST00000443891 CDCA8Q53HL2 280 aa22.9■■□□□ 1.26
CTDSP1-204ENST00000443891 ANKRD24Q8TF21 1146 aa22.9■■□□□ 1.26
CTDSP1-204ENST00000443891 IP6K1Q92551 441 aa22.9■■□□□ 1.26
CTDSP1-204ENST00000443891 COG3Q96JB2 828 aa22.9■■□□□ 1.26
CTDSP1-204ENST00000443891 ANKRD36BQ8N2N9 1353 aa22.89■■□□□ 1.26
CTDSP1-204ENST00000443891 CLSPNQ9HAW4 1339 aa22.88■■□□□ 1.25
CTDSP1-204ENST00000443891 SPON1Q9HCB6 807 aa22.86■■□□□ 1.25
CTDSP1-204ENST00000443891 USP47Q96K76 1375 aa22.86■■□□□ 1.25
CTDSP1-204ENST00000443891 LTN1O94822 1766 aa22.86■■□□□ 1.25
CTDSP1-204ENST00000443891 KCNQ2O43526 872 aa22.83■■□□□ 1.25
CTDSP1-204ENST00000443891 PROM2Q8N271 834 aa22.83■■□□□ 1.25
CTDSP1-204ENST00000443891 PTF1AQ7RTS3 328 aa22.82■■□□□ 1.24
CTDSP1-204ENST00000443891 RTL1A6NKG5 1358 aa22.81■■□□□ 1.24
CTDSP1-204ENST00000443891 TXNRD1Q16881 649 aa22.81■■□□□ 1.24
CTDSP1-204ENST00000443891 MAP3K19Q56UN5 1328 aa22.81■■□□□ 1.24
CTDSP1-204ENST00000443891 FAM208AQ9UK61 1670 aaKnown RBP22.81■■□□□ 1.24
CTDSP1-204ENST00000443891 AMPHP49418 695 aa22.8■■□□□ 1.24
CTDSP1-204ENST00000443891 HOXC9P31274 260 aa22.79■■□□□ 1.24
CTDSP1-204ENST00000443891 FYB1O15117 783 aa22.78■■□□□ 1.24
CTDSP1-204ENST00000443891 ANO8Q9HCE9 1232 aaPredicted RBP22.78■■□□□ 1.24
CTDSP1-204ENST00000443891 STK32BQ9NY57 414 aa22.78■■□□□ 1.24
CTDSP1-204ENST00000443891 NHSQ6T4R5 1651 aa22.77■■□□□ 1.24
CTDSP1-204ENST00000443891 PPP1R1BQ9UD71 204 aaPredicted RBP22.76■■□□□ 1.23
CTDSP1-204ENST00000443891 KIF24Q5T7B8 1368 aa22.76■■□□□ 1.23
CTDSP1-204ENST00000443891 SLC15A2Q16348 729 aa22.75■■□□□ 1.23
CTDSP1-204ENST00000443891 LTV1Q96GA3 475 aaPredicted RBP22.74■■□□□ 1.23
CTDSP1-204ENST00000443891 ACSBG1Q96GR2 724 aa22.74■■□□□ 1.23
CTDSP1-204ENST00000443891 CGNL1Q0VF96 1302 aa22.74■■□□□ 1.23
CTDSP1-204ENST00000443891 SMG6Q86US8 1419 aaKnown RBP22.72■■□□□ 1.23
CTDSP1-204ENST00000443891 GGNBP2Q9H3C7 697 aa22.71■■□□□ 1.23
CTDSP1-204ENST00000443891 ZCRB1Q8TBF4 217 aaKnown RBP22.7■■□□□ 1.22
CTDSP1-204ENST00000443891 DDX54Q8TDD1 881 aaKnown RBP22.7■■□□□ 1.22
CTDSP1-204ENST00000443891 CASZ1Q86V15 1759 aa22.7■■□□□ 1.22
CTDSP1-204ENST00000443891 DCAF8L1A6NGE4 600 aa22.69■■□□□ 1.22
CTDSP1-204ENST00000443891 SLC27A3Q5K4L6 730 aa22.69■■□□□ 1.22
CTDSP1-204ENST00000443891 INSRP06213 1382 aa22.68■■□□□ 1.22
CTDSP1-204ENST00000443891 FBLN1P23142 703 aa22.68■■□□□ 1.22
CTDSP1-204ENST00000443891 RRS1Q15050 365 aaKnown RBP22.68■■□□□ 1.22
CTDSP1-204ENST00000443891 FLT4P35916 1363 aa22.67■■□□□ 1.22
CTDSP1-204ENST00000443891 HMGB2P26583 209 aaKnown RBP22.66■■□□□ 1.22
CTDSP1-204ENST00000443891 MTFR1LQ9H019 292 aa22.66■■□□□ 1.22
CTDSP1-204ENST00000443891 NBPF6Q5VWK0 638 aa22.65■■□□□ 1.22
CTDSP1-204ENST00000443891 RAPGEF4Q8WZA2 1011 aa22.65■■□□□ 1.22
CTDSP1-204ENST00000443891 NBPF4Q96M43 638 aa22.65■■□□□ 1.22
CTDSP1-204ENST00000443891 CARD14Q9BXL6 1004 aa22.64■■□□□ 1.21
CTDSP1-204ENST00000443891 BTAF1O14981 1849 aa22.64■■□□□ 1.21
CTDSP1-204ENST00000443891 ZBTB7AO95365 584 aa22.63■■□□□ 1.21
CTDSP1-204ENST00000443891 PTGER2P43116 358 aa22.63■■□□□ 1.21
CTDSP1-204ENST00000443891 PAPPAQ13219 1627 aa22.63■■□□□ 1.21
CTDSP1-204ENST00000443891 MEGF6O75095 1541 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms