RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 KIF1BO60333 1816 aa13.14□□□□□ -0.31
CALD1-210ENST00000443197 NPHP1O15259 732 aa13.14□□□□□ -0.31
CALD1-210ENST00000443197 KRT28Q7Z3Y7 464 aa13.13□□□□□ -0.31
CALD1-210ENST00000443197 DDX54Q8TDD1 881 aaKnown RBP13.13□□□□□ -0.31
CALD1-210ENST00000443197 ABCC11Q96J66 1382 aa13.13□□□□□ -0.31
CALD1-210ENST00000443197 MAP3K19Q56UN5 1328 aa13.13□□□□□ -0.31
CALD1-210ENST00000443197 AAMPQ13685 434 aa13.13□□□□□ -0.31
CALD1-210ENST00000443197 PRDM11Q9NQV5 511 aa13.13□□□□□ -0.31
CALD1-210ENST00000443197 RNF17Q9BXT8 1623 aaKnown RBP13.13□□□□□ -0.31
CALD1-210ENST00000443197 UBTFL1P0CB47 393 aaPredicted RBP13.13□□□□□ -0.31
CALD1-210ENST00000443197 RSPH6AQ9H0K4 717 aa13.13□□□□□ -0.31
CALD1-210ENST00000443197 CHRNA2Q15822 529 aa13.12□□□□□ -0.31
CALD1-210ENST00000443197 KIAA1211Q6ZU35 1233 aa13.12□□□□□ -0.31
CALD1-210ENST00000443197 KCNH5Q8NCM2 988 aa13.12□□□□□ -0.31
CALD1-210ENST00000443197 GOLGA6L22H0YM25 854 aa13.12□□□□□ -0.31
CALD1-210ENST00000443197 TOM1L2Q6ZVM7 507 aa13.12□□□□□ -0.31
CALD1-210ENST00000443197 TRIM35Q9UPQ4 493 aa13.12□□□□□ -0.31
CALD1-210ENST00000443197 ORAI2Q96SN7 254 aa13.12□□□□□ -0.31
CALD1-210ENST00000443197 NAP1L2Q9ULW6 460 aaPredicted RBP13.12□□□□□ -0.31
CALD1-210ENST00000443197 FGD1P98174 961 aa13.11□□□□□ -0.31
CALD1-210ENST00000443197 CCDC27Q2M243 656 aa13.11□□□□□ -0.31
CALD1-210ENST00000443197 RIC3Q7Z5B4 369 aa13.11□□□□□ -0.31
CALD1-210ENST00000443197 CABLES1Q8TDN4 633 aa13.11□□□□□ -0.31
CALD1-210ENST00000443197 BTBD11A6QL63 1104 aa13.11□□□□□ -0.31
CALD1-210ENST00000443197 NEXNQ0ZGT2 675 aa13.11□□□□□ -0.31
CALD1-210ENST00000443197 LRRC59Q96AG4 307 aaKnown RBP13.11□□□□□ -0.31
CALD1-210ENST00000443197 SPHKAPQ2M3C7 1700 aa13.11□□□□□ -0.31
CALD1-210ENST00000443197 TATP17735 454 aaPredicted RBP13.11□□□□□ -0.31
CALD1-210ENST00000443197 MCCP23508 829 aa13.11□□□□□ -0.31
CALD1-210ENST00000443197 C22orf23Q9BZE7 217 aa13.11□□□□□ -0.31
CALD1-210ENST00000443197 MYL6BP14649 208 aa13.1□□□□□ -0.31
CALD1-210ENST00000443197 KDM5AP29375 1690 aaKnown RBP13.1□□□□□ -0.31
CALD1-210ENST00000443197 MTHFSDQ2M296 383 aaKnown RBP13.1□□□□□ -0.31
CALD1-210ENST00000443197 EYA1Q99502 592 aa13.1□□□□□ -0.31
CALD1-210ENST00000443197 SURF6O75683 361 aaKnown RBP13.1□□□□□ -0.31
CALD1-210ENST00000443197 ANXA1P04083 346 aa13.1□□□□□ -0.31
CALD1-210ENST00000443197 IL13P35225 146 aa13.1□□□□□ -0.31
CALD1-210ENST00000443197 BLMP54132 1417 aaPredicted RBP13.1□□□□□ -0.31
CALD1-210ENST00000443197 CEP152O94986 1710 aa13.1□□□□□ -0.31
CALD1-210ENST00000443197 EIF5BO60841 1220 aaKnown RBP13.1□□□□□ -0.31
CALD1-210ENST00000443197 ALDH1L2Q3SY69 923 aa13.1□□□□□ -0.31
CALD1-210ENST00000443197 ANP32BQ92688 251 aaKnown RBP13.1□□□□□ -0.31
CALD1-210ENST00000443197 MAP3K4Q9Y6R4 1608 aa13.09□□□□□ -0.31
CALD1-210ENST00000443197 CHD1LQ86WJ1 897 aa13.09□□□□□ -0.31
CALD1-210ENST00000443197 FOXD4L5Q5VV16 416 aaPredicted RBP13.08□□□□□ -0.32
CALD1-210ENST00000443197 FOXD4L4Q8WXT5 416 aaPredicted RBP13.08□□□□□ -0.32
CALD1-210ENST00000443197 DDX58O95786 925 aaKnown RBP13.08□□□□□ -0.32
CALD1-210ENST00000443197 TAF7Q15545 349 aaPredicted RBP13.08□□□□□ -0.32
CALD1-210ENST00000443197 TAF7LQ5H9L4 462 aa13.08□□□□□ -0.32
CALD1-210ENST00000443197 ROBO2Q9HCK4 1378 aa13.08□□□□□ -0.32
CALD1-210ENST00000443197 RNF123Q5XPI4 1314 aa13.08□□□□□ -0.32
CALD1-210ENST00000443197 DDX17Q92841 729 aaKnown RBP13.08□□□□□ -0.32
CALD1-210ENST00000443197 EXOC6BQ9Y2D4 811 aa13.08□□□□□ -0.32
CALD1-210ENST00000443197 KIDINS220Q9ULH0 1771 aa13.07□□□□□ -0.32
CALD1-210ENST00000443197 TTC21AQ8NDW8 1320 aa13.07□□□□□ -0.32
CALD1-210ENST00000443197 GNAI2P04899 355 aa13.07□□□□□ -0.32
CALD1-210ENST00000443197 PRR36Q9H6K5 1346 aa13.07□□□□□ -0.32
CALD1-210ENST00000443197 SMARCA5O60264 1052 aaPredicted RBP13.07□□□□□ -0.32
CALD1-210ENST00000443197 GNAI3P08754 354 aa13.07□□□□□ -0.32
CALD1-210ENST00000443197 RTN4Q9NQC3 1192 aaKnown RBP13.07□□□□□ -0.32
CALD1-210ENST00000443197 INO80Q9ULG1 1556 aaPredicted RBP13.07□□□□□ -0.32
CALD1-210ENST00000443197 VAMP4O75379 141 aa13.07□□□□□ -0.32
CALD1-210ENST00000443197 GORABQ5T7V8 394 aa13.07□□□□□ -0.32
CALD1-210ENST00000443197 HDAC5Q9UQL6 1122 aa13.07□□□□□ -0.32
CALD1-210ENST00000443197 ZMYM4Q5VZL5 1548 aa13.07□□□□□ -0.32
CALD1-210ENST00000443197 PPRC1Q5VV67 1664 aaKnown RBP13.06□□□□□ -0.32
CALD1-210ENST00000443197 GCC1Q96CN9 775 aa13.06□□□□□ -0.32
CALD1-210ENST00000443197 MADDQ8WXG6 1647 aa13.06□□□□□ -0.32
CALD1-210ENST00000443197 IL16Q14005 1332 aa13.06□□□□□ -0.32
CALD1-210ENST00000443197 ARHGAP31Q2M1Z3 1444 aa13.06□□□□□ -0.32
CALD1-210ENST00000443197 EDC4Q6P2E9 1401 aaKnown RBP13.06□□□□□ -0.32
CALD1-210ENST00000443197 ANKRD24Q8TF21 1146 aa13.06□□□□□ -0.32
CALD1-210ENST00000443197 IL1RAPL2Q9NP60 686 aa13.06□□□□□ -0.32
CALD1-210ENST00000443197 ANO2Q9NQ90 1003 aa13.06□□□□□ -0.32
CALD1-210ENST00000443197 SRCIN1Q9C0H9 1055 aa13.05□□□□□ -0.32
CALD1-210ENST00000443197 CCT4P50991 539 aaKnown RBP13.05□□□□□ -0.32
CALD1-210ENST00000443197 CABP4P57796 275 aa13.05□□□□□ -0.32
CALD1-210ENST00000443197 NUTM2BA6NNL0 878 aaPredicted RBP13.04□□□□□ -0.32
CALD1-210ENST00000443197 NUTM2EB1AL46 878 aaPredicted RBP13.04□□□□□ -0.32
CALD1-210ENST00000443197 PTCD1O75127 700 aaKnown RBP13.04□□□□□ -0.32
CALD1-210ENST00000443197 NUTM2AQ8IVF1 878 aaPredicted RBP13.04□□□□□ -0.32
CALD1-210ENST00000443197 GPATCH3Q96I76 525 aa13.04□□□□□ -0.32
CALD1-210ENST00000443197 GCP02774 474 aa13.04□□□□□ -0.32
CALD1-210ENST00000443197 SYNMO15061 1565 aa13.04□□□□□ -0.32
CALD1-210ENST00000443197 IFIT2P09913 472 aaKnown RBP13.04□□□□□ -0.32
CALD1-210ENST00000443197 FOXD4L6Q3SYB3 417 aaPredicted RBP13.04□□□□□ -0.32
CALD1-210ENST00000443197 FOXD4L3Q6VB84 417 aaPredicted RBP13.04□□□□□ -0.32
CALD1-210ENST00000443197 HOXC9P31274 260 aa13.03□□□□□ -0.32
CALD1-210ENST00000443197 RBM42Q9BTD8 480 aaKnown RBP13.03□□□□□ -0.32
CALD1-210ENST00000443197 PLEKHG3A1L390 1219 aa13.03□□□□□ -0.32
CALD1-210ENST00000443197 G3BP1Q13283 466 aaKnown RBP eCLIP13.03□□□□□ -0.328e-9■□□□□ 9.6
CALD1-210ENST00000443197 A2ML1A8K2U0 1454 aa13.03□□□□□ -0.32
CALD1-210ENST00000443197 SIL1Q9H173 461 aa13.03□□□□□ -0.32
CALD1-210ENST00000443197 SPG7Q9UQ90 795 aa13.03□□□□□ -0.32
CALD1-210ENST00000443197 RIMBP3CA6NJZ7 1639 aa13.03□□□□□ -0.32
CALD1-210ENST00000443197 RIMBP3BA6NNM3 1639 aa13.03□□□□□ -0.32
CALD1-210ENST00000443197 RIMBP3Q9UFD9 1639 aa13.03□□□□□ -0.32
CALD1-210ENST00000443197 FLT4P35916 1363 aa13.03□□□□□ -0.32
CALD1-210ENST00000443197 MAP4K4O95819 1239 aaPredicted RBP13.02□□□□□ -0.32
CALD1-210ENST00000443197 FLIIQ13045 1269 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms