RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 CENPJQ9HC77 1338 aaPredicted RBP20.97■□□□□ 0.95
HMGN1-208ENST00000443046 NLRP6P59044 892 aa20.96■□□□□ 0.95
HMGN1-208ENST00000443046 MARCH10Q8NA82 808 aaPredicted RBP20.96■□□□□ 0.95
HMGN1-208ENST00000443046 PDGFDQ9GZP0 370 aaPredicted RBP20.96■□□□□ 0.95
HMGN1-208ENST00000443046 AXIN2Q9Y2T1 843 aa20.96■□□□□ 0.95
HMGN1-208ENST00000443046 DCAF8L1A6NGE4 600 aa20.95■□□□□ 0.94
HMGN1-208ENST00000443046 CABP1Q9NZU7 370 aa20.95■□□□□ 0.94
HMGN1-208ENST00000443046 PIK3C2AO00443 1686 aa20.94■□□□□ 0.94
HMGN1-208ENST00000443046 CDCA7Q9BWT1 371 aaPredicted RBP20.94■□□□□ 0.94
HMGN1-208ENST00000443046 WDR17Q8IZU2 1322 aa20.94■□□□□ 0.94
HMGN1-208ENST00000443046 TOM1L2Q6ZVM7 507 aa20.93■□□□□ 0.94
HMGN1-208ENST00000443046 PTGER2P43116 358 aa20.92■□□□□ 0.94
HMGN1-208ENST00000443046 QRICH2Q9H0J4 1663 aa20.92■□□□□ 0.94
HMGN1-208ENST00000443046 AKAP12Q02952 1782 aa20.91■□□□□ 0.94
HMGN1-208ENST00000443046 ARHGEF25Q86VW2 580 aa20.91■□□□□ 0.94
HMGN1-208ENST00000443046 CPSF1Q10570 1443 aaKnown RBP20.9■□□□□ 0.94
HMGN1-208ENST00000443046 ZBTB7CA1YPR0 619 aa20.9■□□□□ 0.94
HMGN1-208ENST00000443046 MYOM1P52179 1685 aa20.89■□□□□ 0.94
HMGN1-208ENST00000443046 CARD10Q9BWT7 1032 aa20.89■□□□□ 0.93
HMGN1-208ENST00000443046 RGPD5Q99666 1765 aa20.89■□□□□ 0.93
HMGN1-208ENST00000443046 ZBTB7AO95365 584 aa20.88■□□□□ 0.93
HMGN1-208ENST00000443046 GOLGB1Q14789 3259 aaKnown RBP20.87■□□□□ 0.93
HMGN1-208ENST00000443046 TXNRD1Q16881 649 aa20.87■□□□□ 0.93
HMGN1-208ENST00000443046 SLC15A2Q16348 729 aa20.86■□□□□ 0.93
HMGN1-208ENST00000443046 KCNH5Q8NCM2 988 aa20.85■□□□□ 0.93
HMGN1-208ENST00000443046 SGIP1Q9BQI5 828 aa20.85■□□□□ 0.93
HMGN1-208ENST00000443046 TTC21BQ7Z4L5 1316 aa20.84■□□□□ 0.93
HMGN1-208ENST00000443046 ZNF692Q9BU19 519 aaPredicted RBP20.84■□□□□ 0.93
HMGN1-208ENST00000443046 STK32BQ9NY57 414 aa20.84■□□□□ 0.93
HMGN1-208ENST00000443046 ATF5Q9Y2D1 282 aaPredicted RBP20.84■□□□□ 0.93
HMGN1-208ENST00000443046 NFAT5O94916 1531 aa20.83■□□□□ 0.93
HMGN1-208ENST00000443046 TRPM1Q7Z4N2 1603 aa20.83■□□□□ 0.93
HMGN1-208ENST00000443046 EXOC5O00471 708 aa20.83■□□□□ 0.93
HMGN1-208ENST00000443046 ZNF784Q8NCA9 323 aaPredicted RBP20.83■□□□□ 0.93
HMGN1-208ENST00000443046 SYT17Q9BSW7 474 aa20.83■□□□□ 0.93
HMGN1-208ENST00000443046 EVC2Q86UK5 1308 aa20.82■□□□□ 0.92
HMGN1-208ENST00000443046 FHDC1Q9C0D6 1143 aaPredicted RBP20.82■□□□□ 0.92
HMGN1-208ENST00000443046 ABCC6O95255 1503 aa20.82■□□□□ 0.92
HMGN1-208ENST00000443046 MTFR1LQ9H019 292 aa20.81■□□□□ 0.92
HMGN1-208ENST00000443046 CCDC7Q96M83 1385 aa20.81■□□□□ 0.92
HMGN1-208ENST00000443046 TTC21AQ8NDW8 1320 aa20.8■□□□□ 0.92
HMGN1-208ENST00000443046 NHSQ6T4R5 1651 aa20.8■□□□□ 0.92
HMGN1-208ENST00000443046 TNS2Q63HR2 1409 aa20.79■□□□□ 0.92
HMGN1-208ENST00000443046 CHD4Q14839 1912 aa20.79■□□□□ 0.92
HMGN1-208ENST00000443046 PAPPAQ13219 1627 aa20.78■□□□□ 0.92
HMGN1-208ENST00000443046 CSB-PGBD3P0DP91 1061 aa20.78■□□□□ 0.92
HMGN1-208ENST00000443046 MAP3K5Q99683 1374 aa20.76■□□□□ 0.91
HMGN1-208ENST00000443046 SOX12O15370 315 aa20.75■□□□□ 0.91
HMGN1-208ENST00000443046 L3MBTL2Q969R5 705 aa20.75■□□□□ 0.91
HMGN1-208ENST00000443046 CEP350Q5VT06 3117 aa20.75■□□□□ 0.91
HMGN1-208ENST00000443046 USP54Q70EL1 1684 aa20.74■□□□□ 0.91
HMGN1-208ENST00000443046 USP31Q70CQ4 1352 aa20.73■□□□□ 0.91
HMGN1-208ENST00000443046 MON2Q7Z3U7 1717 aa20.73■□□□□ 0.91
HMGN1-208ENST00000443046 KTN1Q86UP2 1357 aaKnown RBP20.72■□□□□ 0.91
HMGN1-208ENST00000443046 ARXQ96QS3 562 aa20.72■□□□□ 0.91
HMGN1-208ENST00000443046 ERBB3P21860 1342 aa20.72■□□□□ 0.91
HMGN1-208ENST00000443046 BTAF1O14981 1849 aa20.71■□□□□ 0.91
HMGN1-208ENST00000443046 ACSBG1Q96GR2 724 aa20.71■□□□□ 0.91
HMGN1-208ENST00000443046 IL2RBP14784 551 aa20.69■□□□□ 0.9
HMGN1-208ENST00000443046 ZNF827Q17R98 1081 aa20.69■□□□□ 0.9
HMGN1-208ENST00000443046 LRRC4BQ9NT99 713 aa20.69■□□□□ 0.9
HMGN1-208ENST00000443046 COL24A1Q17RW2 1714 aa20.69■□□□□ 0.9
HMGN1-208ENST00000443046 CD163L1Q9NR16 1453 aa20.68■□□□□ 0.9
HMGN1-208ENST00000443046 QSER1Q2KHR3 1735 aa20.67■□□□□ 0.9
HMGN1-208ENST00000443046 LTN1O94822 1766 aa20.67■□□□□ 0.9
HMGN1-208ENST00000443046 C1QTNF8P60827 252 aa20.67■□□□□ 0.9
HMGN1-208ENST00000443046 NLRP2Q9NX02 1062 aa20.67■□□□□ 0.9
HMGN1-208ENST00000443046 AKT1S1Q96B36 256 aa20.66■□□□□ 0.9
HMGN1-208ENST00000443046 ROCK2O75116 1388 aaKnown RBP20.66■□□□□ 0.9
HMGN1-208ENST00000443046 SBNO2Q9Y2G9 1366 aa20.66■□□□□ 0.9
HMGN1-208ENST00000443046 KAT6BQ8WYB5 2073 aa20.66■□□□□ 0.9
HMGN1-208ENST00000443046 NME9Q86XW9 330 aa20.64■□□□□ 0.89
HMGN1-208ENST00000443046 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.64■□□□□ 0.89
HMGN1-208ENST00000443046 ANKRD24Q8TF21 1146 aa20.64■□□□□ 0.89
HMGN1-208ENST00000443046 SLC16A10Q8TF71 515 aa20.64■□□□□ 0.89
HMGN1-208ENST00000443046 SENP3-EIF4A1A0A087X0R7 540 aa20.62■□□□□ 0.89
HMGN1-208ENST00000443046 SLC27A3Q5K4L6 730 aa20.62■□□□□ 0.89
HMGN1-208ENST00000443046 SIN3AQ96ST3 1273 aa20.6■□□□□ 0.89
HMGN1-208ENST00000443046 PNPLA7Q6ZV29 1317 aa20.59■□□□□ 0.89
HMGN1-208ENST00000443046 GPR162Q16538 588 aa20.59■□□□□ 0.89
HMGN1-208ENST00000443046 TUBGCP6Q96RT7 1819 aa20.58■□□□□ 0.89
HMGN1-208ENST00000443046 EDC4Q6P2E9 1401 aaKnown RBP20.58■□□□□ 0.88
HMGN1-208ENST00000443046 IP6K1Q92551 441 aa20.56■□□□□ 0.88
HMGN1-208ENST00000443046 SLC12A5Q9H2X9 1139 aa20.56■□□□□ 0.88
HMGN1-208ENST00000443046 LY75O60449 1722 aa20.56■□□□□ 0.88
HMGN1-208ENST00000443046 FAM208AQ9UK61 1670 aaKnown RBP20.55■□□□□ 0.88
HMGN1-208ENST00000443046 POLD1P28340 1107 aa20.55■□□□□ 0.88
HMGN1-208ENST00000443046 HDGFL2Q7Z4V5 671 aaPredicted RBP20.54■□□□□ 0.88
HMGN1-208ENST00000443046 DDX54Q8TDD1 881 aaKnown RBP20.54■□□□□ 0.88
HMGN1-208ENST00000443046 NSD2O96028 1365 aa20.54■□□□□ 0.88
HMGN1-208ENST00000443046 SHANK3Q9BYB0 1731 aa20.53■□□□□ 0.88
HMGN1-208ENST00000443046 NLGN2Q8NFZ4 835 aa20.53■□□□□ 0.88
HMGN1-208ENST00000443046 ANKRD36BQ8N2N9 1353 aa20.53■□□□□ 0.88
HMGN1-208ENST00000443046 A0A1W2PP64 1363 aa20.52■□□□□ 0.88
HMGN1-208ENST00000443046 KCNQ4P56696 695 aa20.52■□□□□ 0.88
HMGN1-208ENST00000443046 TMC1Q8TDI8 760 aa20.52■□□□□ 0.88
HMGN1-208ENST00000443046 PUS7Q96PZ0 661 aaKnown RBP20.52■□□□□ 0.88
HMGN1-208ENST00000443046 TFCP2L1Q9NZI6 479 aa20.52■□□□□ 0.88
HMGN1-208ENST00000443046 GIGYF1O75420 1035 aaPredicted RBP20.51■□□□□ 0.87
HMGN1-208ENST00000443046 PRIM1P49642 420 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms