RNA–Protein interactions for RNA: ENST00000442275.1

LCP1-204, Transcript of lymphocyte cytosolic protein 1, humanhuman

TSL 3

Gene LCP1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-204ENST00000442275 SLIT3O75094 1523 aa29.51■■■□□ 2.32
LCP1-204ENST00000442275 BRD4O60885 1362 aaPredicted RBP29.51■■■□□ 2.31
LCP1-204ENST00000442275 QRICH2Q9H0J4 1663 aa29.5■■■□□ 2.31
LCP1-204ENST00000442275 WNK3Q9BYP7 1800 aa29.5■■■□□ 2.31
LCP1-204ENST00000442275 ZBTB7AO95365 584 aa29.5■■■□□ 2.31
LCP1-204ENST00000442275 MARCH10Q8NA82 808 aaPredicted RBP29.48■■■□□ 2.31
LCP1-204ENST00000442275 AXIN2Q9Y2T1 843 aa29.48■■■□□ 2.31
LCP1-204ENST00000442275 COL18A1P39060 1754 aa29.48■■■□□ 2.31
LCP1-204ENST00000442275 AKAP12Q02952 1782 aa29.48■■■□□ 2.31
LCP1-204ENST00000442275 PIK3C2AO00443 1686 aa29.47■■■□□ 2.31
LCP1-204ENST00000442275 WDR17Q8IZU2 1322 aa29.46■■■□□ 2.31
LCP1-204ENST00000442275 PROM2Q8N271 834 aa29.46■■■□□ 2.31
LCP1-204ENST00000442275 MYOM1P52179 1685 aa29.45■■■□□ 2.31
LCP1-204ENST00000442275 SOX12O15370 315 aa29.45■■■□□ 2.31
LCP1-204ENST00000442275 ATF5Q9Y2D1 282 aaPredicted RBP29.44■■■□□ 2.3
LCP1-204ENST00000442275 RGPD5Q99666 1765 aa29.44■■■□□ 2.3
LCP1-204ENST00000442275 CPSF1Q10570 1443 aaKnown RBP29.43■■■□□ 2.3
LCP1-204ENST00000442275 CSB-PGBD3P0DP91 1061 aa29.42■■■□□ 2.3
LCP1-204ENST00000442275 CDCA7Q9BWT1 371 aaPredicted RBP29.41■■■□□ 2.3
LCP1-204ENST00000442275 STK32BQ9NY57 414 aa29.41■■■□□ 2.3
LCP1-204ENST00000442275 UTRNP46939 3433 aa29.39■■■□□ 2.3
LCP1-204ENST00000442275 PTGER2P43116 358 aa29.39■■■□□ 2.3
LCP1-204ENST00000442275 TXNRD1Q16881 649 aa29.39■■■□□ 2.3
LCP1-204ENST00000442275 ARHGEF25Q86VW2 580 aa29.38■■■□□ 2.29
LCP1-204ENST00000442275 BCL9O00512 1426 aa29.37■■■□□ 2.29
LCP1-204ENST00000442275 CARD10Q9BWT7 1032 aa29.36■■■□□ 2.29
LCP1-204ENST00000442275 EXOC5O00471 708 aa29.35■■■□□ 2.29
LCP1-204ENST00000442275 SLC15A2Q16348 729 aa29.35■■■□□ 2.29
LCP1-204ENST00000442275 KCNH5Q8NCM2 988 aa29.35■■■□□ 2.29
LCP1-204ENST00000442275 TTC21BQ7Z4L5 1316 aa29.35■■■□□ 2.29
LCP1-204ENST00000442275 EVC2Q86UK5 1308 aa29.35■■■□□ 2.29
LCP1-204ENST00000442275 FHDC1Q9C0D6 1143 aaPredicted RBP29.33■■■□□ 2.29
LCP1-204ENST00000442275 ZNF784Q8NCA9 323 aaPredicted RBP29.32■■■□□ 2.28
LCP1-204ENST00000442275 SYT17Q9BSW7 474 aa29.31■■■□□ 2.28
LCP1-204ENST00000442275 TRPM1Q7Z4N2 1603 aa29.31■■■□□ 2.28
LCP1-204ENST00000442275 ACSBG1Q96GR2 724 aa29.29■■■□□ 2.28
LCP1-204ENST00000442275 ZNF692Q9BU19 519 aaPredicted RBP29.29■■■□□ 2.28
LCP1-204ENST00000442275 MTFR1LQ9H019 292 aa29.29■■■□□ 2.28
LCP1-204ENST00000442275 TNS2Q63HR2 1409 aa29.28■■■□□ 2.28
LCP1-204ENST00000442275 CCDC7Q96M83 1385 aa29.27■■■□□ 2.28
LCP1-204ENST00000442275 NFAT5O94916 1531 aa29.27■■■□□ 2.28
LCP1-204ENST00000442275 TTC21AQ8NDW8 1320 aa29.26■■■□□ 2.27
LCP1-204ENST00000442275 NHSQ6T4R5 1651 aa29.25■■■□□ 2.27
LCP1-204ENST00000442275 SGIP1Q9BQI5 828 aa29.23■■■□□ 2.27
LCP1-204ENST00000442275 KTN1Q86UP2 1357 aaKnown RBP29.23■■■□□ 2.27
LCP1-204ENST00000442275 CHD4Q14839 1912 aa29.22■■■□□ 2.27
LCP1-204ENST00000442275 L3MBTL2Q969R5 705 aa29.22■■■□□ 2.27
LCP1-204ENST00000442275 KAT6BQ8WYB5 2073 aa29.22■■■□□ 2.27
LCP1-204ENST00000442275 ARXQ96QS3 562 aa29.2■■■□□ 2.26
LCP1-204ENST00000442275 NLRP2Q9NX02 1062 aa29.2■■■□□ 2.26
LCP1-204ENST00000442275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.19■■■□□ 2.26
LCP1-204ENST00000442275 ABCC6O95255 1503 aa29.19■■■□□ 2.26
LCP1-204ENST00000442275 BTAF1O14981 1849 aa29.17■■■□□ 2.26
LCP1-204ENST00000442275 ROCK2O75116 1388 aaKnown RBP29.17■■■□□ 2.26
LCP1-204ENST00000442275 PAPPAQ13219 1627 aa29.17■■■□□ 2.26
LCP1-204ENST00000442275 SENP3-EIF4A1A0A087X0R7 540 aa29.16■■■□□ 2.26
LCP1-204ENST00000442275 ERBB3P21860 1342 aa29.16■■■□□ 2.26
LCP1-204ENST00000442275 MON2Q7Z3U7 1717 aa29.15■■■□□ 2.26
LCP1-204ENST00000442275 ZNF827Q17R98 1081 aa29.15■■■□□ 2.26
LCP1-204ENST00000442275 IL2RBP14784 551 aa29.14■■■□□ 2.26
LCP1-204ENST00000442275 LTN1O94822 1766 aa29.13■■■□□ 2.25
LCP1-204ENST00000442275 NME9Q86XW9 330 aa29.12■■■□□ 2.25
LCP1-204ENST00000442275 KLHL34Q8N239 644 aa29.12■■■□□ 2.25
LCP1-204ENST00000442275 GPR162Q16538 588 aa29.1■■■□□ 2.25
LCP1-204ENST00000442275 ANKRD24Q8TF21 1146 aa29.1■■■□□ 2.25
LCP1-204ENST00000442275 LRRC4BQ9NT99 713 aa29.1■■■□□ 2.25
LCP1-204ENST00000442275 C1QTNF8P60827 252 aa29.09■■■□□ 2.25
LCP1-204ENST00000442275 SIN3AQ96ST3 1273 aa29.09■■■□□ 2.25
LCP1-204ENST00000442275 USP31Q70CQ4 1352 aa29.09■■■□□ 2.25
LCP1-204ENST00000442275 MAP3K5Q99683 1374 aa29.08■■■□□ 2.25
LCP1-204ENST00000442275 USP54Q70EL1 1684 aa29.06■■■□□ 2.24
LCP1-204ENST00000442275 PELP1Q8IZL8 1130 aaKnown RBP29.06■■■□□ 2.24
LCP1-204ENST00000442275 NEUROD1Q13562 356 aa29.05■■■□□ 2.24
LCP1-204ENST00000442275 TMC1Q8TDI8 760 aa29.05■■■□□ 2.24
LCP1-204ENST00000442275 SBNO2Q9Y2G9 1366 aa29.03■■■□□ 2.24
LCP1-204ENST00000442275 DDX54Q8TDD1 881 aaKnown RBP29.03■■■□□ 2.24
LCP1-204ENST00000442275 CD163L1Q9NR16 1453 aa29.03■■■□□ 2.24
LCP1-204ENST00000442275 AKT1S1Q96B36 256 aa29.02■■■□□ 2.24
LCP1-204ENST00000442275 POLD1P28340 1107 aa29.01■■■□□ 2.23
LCP1-204ENST00000442275 KCNQ4P56696 695 aa29■■■□□ 2.23
LCP1-204ENST00000442275 HDGFL2Q7Z4V5 671 aaPredicted RBP29■■■□□ 2.23
LCP1-204ENST00000442275 LTV1Q96GA3 475 aaPredicted RBP29■■■□□ 2.23
LCP1-204ENST00000442275 GOLGB1Q14789 3259 aaKnown RBP29■■■□□ 2.23
LCP1-204ENST00000442275 SYTL4Q96C24 671 aaPredicted RBP28.99■■■□□ 2.23
LCP1-204ENST00000442275 PNPLA7Q6ZV29 1317 aa28.98■■■□□ 2.23
LCP1-204ENST00000442275 QSER1Q2KHR3 1735 aa28.98■■■□□ 2.23
LCP1-204ENST00000442275 SLC27A3Q5K4L6 730 aa28.98■■■□□ 2.23
LCP1-204ENST00000442275 SLC16A10Q8TF71 515 aa28.98■■■□□ 2.23
LCP1-204ENST00000442275 TFCP2L1Q9NZI6 479 aa28.98■■■□□ 2.23
LCP1-204ENST00000442275 TUBGCP6Q96RT7 1819 aa28.97■■■□□ 2.23
LCP1-204ENST00000442275 SLC12A5Q9H2X9 1139 aa28.97■■■□□ 2.23
LCP1-204ENST00000442275 GIGYF1O75420 1035 aaPredicted RBP28.95■■■□□ 2.22
LCP1-204ENST00000442275 EDC4Q6P2E9 1401 aaKnown RBP28.94■■■□□ 2.22
LCP1-204ENST00000442275 NLGN2Q8NFZ4 835 aa28.94■■■□□ 2.22
LCP1-204ENST00000442275 COL24A1Q17RW2 1714 aa28.92■■■□□ 2.22
LCP1-204ENST00000442275 DOT1LQ8TEK3 1739 aa28.92■■■□□ 2.22
LCP1-204ENST00000442275 PRIM1P49642 420 aaKnown RBP28.92■■■□□ 2.22
LCP1-204ENST00000442275 IP6K1Q92551 441 aa28.92■■■□□ 2.22
LCP1-204ENST00000442275 A0A1W2PP64 1363 aa28.91■■■□□ 2.22
LCP1-204ENST00000442275 FAM208AQ9UK61 1670 aaKnown RBP28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms