RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 MS4A1P11836 297 aa3.46□□□□□ -1.86
LIG4-203ENST00000442234 ZBTB9Q96C00 473 aa3.46□□□□□ -1.86
LIG4-203ENST00000442234 PCNTO95613 3336 aa3.46□□□□□ -1.86
LIG4-203ENST00000442234 CDK13Q14004 1512 aaKnown RBP3.46□□□□□ -1.86
LIG4-203ENST00000442234 RICTORQ6R327 1708 aa3.46□□□□□ -1.86
LIG4-203ENST00000442234 LRRIQ1Q96JM4 1722 aa3.46□□□□□ -1.86
LIG4-203ENST00000442234 SNPHO15079 494 aa3.46□□□□□ -1.86
LIG4-203ENST00000442234 IGSF3O75054 1194 aa3.46□□□□□ -1.86
LIG4-203ENST00000442234 CLSTN1O94985 981 aa3.46□□□□□ -1.86
LIG4-203ENST00000442234 SEC24BO95487 1268 aa3.46□□□□□ -1.86
LIG4-203ENST00000442234 HMGB1P09429 215 aaKnown RBP3.46□□□□□ -1.86
LIG4-203ENST00000442234 KANK4Q5T7N3 995 aaPredicted RBP3.46□□□□□ -1.86
LIG4-203ENST00000442234 TICAM2Q86XR7 235 aa3.46□□□□□ -1.86
LIG4-203ENST00000442234 MICALL2Q8IY33 904 aa3.46□□□□□ -1.86
LIG4-203ENST00000442234 BANK1Q8NDB2 785 aa3.46□□□□□ -1.86
LIG4-203ENST00000442234 CHMP4CQ96CF2 233 aa3.46□□□□□ -1.86
LIG4-203ENST00000442234 PHF8Q9UPP1 1060 aa3.46□□□□□ -1.86
LIG4-203ENST00000442234 ADAMTS12P58397 1594 aa3.46□□□□□ -1.86
LIG4-203ENST00000442234 ZNF142P52746 1687 aaPredicted RBP3.45□□□□□ -1.86
LIG4-203ENST00000442234 LMOD3Q0VAK6 560 aa3.45□□□□□ -1.86
LIG4-203ENST00000442234 KRT27Q7Z3Y8 459 aa3.45□□□□□ -1.86
LIG4-203ENST00000442234 C16orf71Q8IYS4 520 aaPredicted RBP3.45□□□□□ -1.86
LIG4-203ENST00000442234 CLIP1P30622 1438 aa3.45□□□□□ -1.86
LIG4-203ENST00000442234 DYNC1I1O14576 645 aa3.45□□□□□ -1.86
LIG4-203ENST00000442234 OTUD5Q96G74 571 aa3.45□□□□□ -1.86
LIG4-203ENST00000442234 MIA2Q96PC5 1412 aa3.45□□□□□ -1.86
LIG4-203ENST00000442234 POTEB2H3BUK9 544 aa3.45□□□□□ -1.86
LIG4-203ENST00000442234 PSMD1Q99460 953 aa3.45□□□□□ -1.86
LIG4-203ENST00000442234 CRISPLD2Q9H0B8 497 aa3.45□□□□□ -1.86
LIG4-203ENST00000442234 GRPEL1Q9HAV7 217 aa3.45□□□□□ -1.86
LIG4-203ENST00000442234 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.45□□□□□ -1.86
LIG4-203ENST00000442234 NUP160Q12769 1436 aa3.45□□□□□ -1.86
LIG4-203ENST00000442234 SPATA31D1Q6ZQQ2 1576 aa3.45□□□□□ -1.86
LIG4-203ENST00000442234 ZSCAN30Q86W11 494 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 TRERF1Q96PN7 1200 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 PDGFDQ9GZP0 370 aaPredicted RBP3.44□□□□□ -1.86
LIG4-203ENST00000442234 BCORL1Q5H9F3 1711 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 GIGYF1O75420 1035 aaPredicted RBP3.44□□□□□ -1.86
LIG4-203ENST00000442234 OFD1O75665 1012 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 TNNT1P13805 278 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 CSPP1Q1MSJ5 1256 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 TMEM132AQ24JP5 1023 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 FAM43BQ6ZT52 329 aaPredicted RBP3.44□□□□□ -1.86
LIG4-203ENST00000442234 NGEFQ8N5V2 710 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 TIGD1Q96MW7 591 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 TSPYL1Q9H0U9 437 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 GPBP1L1Q9HC44 474 aaPredicted RBP3.44□□□□□ -1.86
LIG4-203ENST00000442234 TFCP2L1Q9NZI6 479 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 PCDH10Q9P2E7 1040 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 TRAPPC8Q9Y2L5 1435 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 KDM5BQ9UGL1 1544 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 ZSCAN20P17040 1043 aaPredicted RBP3.44□□□□□ -1.86
LIG4-203ENST00000442234 RIPK4P57078 832 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 CAMK2BQ13554 666 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 KRT28Q7Z3Y7 464 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 GPATCH11Q8N954 259 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 C19orf44Q9H6X5 657 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 KIF3AQ9Y496 699 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 KANK1Q14678 1352 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 ATP10BO94823 1461 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 ABCA10Q8WWZ4 1543 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 CFAP65Q6ZU64 1925 aaKnown RBP3.44□□□□□ -1.86
LIG4-203ENST00000442234 SPRYD3Q8NCJ5 442 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 SPON1Q9HCB6 807 aa3.44□□□□□ -1.86
LIG4-203ENST00000442234 MCCP23508 829 aa3.43□□□□□ -1.86
LIG4-203ENST00000442234 BRINP3Q76B58 766 aa3.43□□□□□ -1.86
LIG4-203ENST00000442234 GOLIM4O00461 696 aa3.43□□□□□ -1.86
LIG4-203ENST00000442234 GTF2A1P52655 376 aaPredicted RBP3.43□□□□□ -1.86
LIG4-203ENST00000442234 TERF1P54274 439 aa3.43□□□□□ -1.86
LIG4-203ENST00000442234 BICDL1Q6ZP65 573 aa3.43□□□□□ -1.86
LIG4-203ENST00000442234 ABTB2Q8N961 1025 aa3.43□□□□□ -1.86
LIG4-203ENST00000442234 BCS1LQ9Y276 419 aa3.43□□□□□ -1.86
LIG4-203ENST00000442234 ERICH3Q5RHP9 1530 aa3.43□□□□□ -1.86
LIG4-203ENST00000442234 NBPF1Q3BBV0 1214 aa3.43□□□□□ -1.86
LIG4-203ENST00000442234 GPHNQ9NQX3 736 aaPredicted RBP3.43□□□□□ -1.86
LIG4-203ENST00000442234 CALCOCO1Q9P1Z2 691 aa3.43□□□□□ -1.86
LIG4-203ENST00000442234 ERICH4A6NGS2 130 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 TRAK2O60296 914 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 C1QTNF8P60827 252 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 CCDC173Q0VFZ6 552 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 CCDC24Q8N4L8 307 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 SPTBN2O15020 2390 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 COL24A1Q17RW2 1714 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 VPS8Q8N3P4 1428 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 ZBED9Q6R2W3 1325 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 PCF11O94913 1555 aaKnown RBP3.42□□□□□ -1.86
LIG4-203ENST00000442234 GOLGA6L6A8MZA4 724 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 FOXK1P85037 733 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 CHAF1AQ13111 956 aaPredicted RBP3.42□□□□□ -1.86
LIG4-203ENST00000442234 SASS6Q6UVJ0 657 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 ZNF408Q9H9D4 720 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 SLC52A1Q9NWF4 448 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 NUDCQ9Y266 331 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 RIMS1Q86UR5 1692 aaKnown RBP3.42□□□□□ -1.86
LIG4-203ENST00000442234 ERBB4Q15303 1308 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 LOC102724159A0A0B4J2E5 919 aa3.42□□□□□ -1.86
LIG4-203ENST00000442234 PWP2Q15269 919 aaKnown RBP3.42□□□□□ -1.86
LIG4-203ENST00000442234 GJD4Q96KN9 370 aaPredicted RBP3.42□□□□□ -1.86
LIG4-203ENST00000442234 ISY1Q9ULR0 285 aaKnown RBP3.42□□□□□ -1.86
LIG4-203ENST00000442234 PDE4DIPQ5VU43 2346 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms