RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 ZBTB40Q9NUA8 1239 aa16.5■□□□□ 0.23
SLC48A1-201ENST00000442218 ABCC11Q96J66 1382 aa16.49■□□□□ 0.23
SLC48A1-201ENST00000442218 TRAK2O60296 914 aa16.49■□□□□ 0.23
SLC48A1-201ENST00000442218 CD163L1Q9NR16 1453 aa16.49■□□□□ 0.23
SLC48A1-201ENST00000442218 HSP90AB1P08238 724 aaKnown RBP16.48■□□□□ 0.23
SLC48A1-201ENST00000442218 SLC26A8Q96RN1 970 aa16.48■□□□□ 0.23
SLC48A1-201ENST00000442218 GOLGA6L3A6NEY3 463 aa16.48■□□□□ 0.23
SLC48A1-201ENST00000442218 ADAMTS13Q76LX8 1427 aa16.47■□□□□ 0.23
SLC48A1-201ENST00000442218 CHD1LQ86WJ1 897 aa16.47■□□□□ 0.23
SLC48A1-201ENST00000442218 DLC1Q96QB1 1528 aa16.46■□□□□ 0.23
SLC48A1-201ENST00000442218 AEBP1Q8IUX7 1158 aa16.46■□□□□ 0.23
SLC48A1-201ENST00000442218 C16orf71Q8IYS4 520 aaPredicted RBP16.45■□□□□ 0.22
SLC48A1-201ENST00000442218 CHMP5Q9NZZ3 219 aa16.45■□□□□ 0.22
SLC48A1-201ENST00000442218 SMC5Q8IY18 1101 aa16.45■□□□□ 0.22
SLC48A1-201ENST00000442218 HDAC1Q13547 482 aaPredicted RBP16.44■□□□□ 0.22
SLC48A1-201ENST00000442218 RIMS1Q86UR5 1692 aaKnown RBP16.44■□□□□ 0.22
SLC48A1-201ENST00000442218 PLEKHG1Q9ULL1 1385 aa16.44■□□□□ 0.22
SLC48A1-201ENST00000442218 EID1Q9Y6B2 187 aa16.44■□□□□ 0.22
SLC48A1-201ENST00000442218 C8orf58Q8NAV2 365 aa16.43■□□□□ 0.22
SLC48A1-201ENST00000442218 IPO8O15397 1037 aaKnown RBP16.43■□□□□ 0.22
SLC48A1-201ENST00000442218 MIS18AQ9NYP9 233 aa16.43■□□□□ 0.22
SLC48A1-201ENST00000442218 NUCB1Q02818 461 aa16.43■□□□□ 0.22
SLC48A1-201ENST00000442218 RBM33Q96EV2 1170 aaKnown RBP16.43■□□□□ 0.22
SLC48A1-201ENST00000442218 RSPH6AQ9H0K4 717 aa16.43■□□□□ 0.22
SLC48A1-201ENST00000442218 ROBO2Q9HCK4 1378 aa16.42■□□□□ 0.22
SLC48A1-201ENST00000442218 SIRT2Q8IXJ6 389 aa16.42■□□□□ 0.22
SLC48A1-201ENST00000442218 OTUD7AQ8TE49 926 aaPredicted RBP16.42■□□□□ 0.22
SLC48A1-201ENST00000442218 TNPO1Q92973 898 aaKnown RBP16.42■□□□□ 0.22
SLC48A1-201ENST00000442218 CHAMP1Q96JM3 812 aa16.42■□□□□ 0.22
SLC48A1-201ENST00000442218 MBIPQ9NS73 344 aa16.42■□□□□ 0.22
SLC48A1-201ENST00000442218 SMARCA5O60264 1052 aaPredicted RBP16.42■□□□□ 0.22
SLC48A1-201ENST00000442218 FOXD4L5Q5VV16 416 aaPredicted RBP16.42■□□□□ 0.22
SLC48A1-201ENST00000442218 THEMISQ8N1K5 641 aaPredicted RBP16.42■□□□□ 0.22
SLC48A1-201ENST00000442218 FAM43AQ8N2R8 423 aa16.42■□□□□ 0.22
SLC48A1-201ENST00000442218 FOXD4L4Q8WXT5 416 aaPredicted RBP16.42■□□□□ 0.22
SLC48A1-201ENST00000442218 NUDT16Q96DE0 195 aaKnown RBP16.41■□□□□ 0.22
SLC48A1-201ENST00000442218 WASLO00401 505 aaPredicted RBP16.41■□□□□ 0.22
SLC48A1-201ENST00000442218 NAP1L5Q96NT1 182 aaPredicted RBP16.41■□□□□ 0.22
SLC48A1-201ENST00000442218 ARHGAP23Q9P227 1491 aa16.41■□□□□ 0.22
SLC48A1-201ENST00000442218 VAMP4O75379 141 aa16.4■□□□□ 0.22
SLC48A1-201ENST00000442218 NUTM2GQ5VZR2 741 aa16.4■□□□□ 0.22
SLC48A1-201ENST00000442218 TBC1D9Q6ZT07 1266 aa16.4■□□□□ 0.22
SLC48A1-201ENST00000442218 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
SLC48A1-201ENST00000442218 SLIT1O75093 1534 aa16.4■□□□□ 0.22
SLC48A1-201ENST00000442218 L1TD1Q5T7N2 865 aaKnown RBP16.4■□□□□ 0.22
SLC48A1-201ENST00000442218 KIF16BQ96L93 1317 aa16.4■□□□□ 0.22
SLC48A1-201ENST00000442218 PTPRUQ92729 1446 aa16.4■□□□□ 0.22
SLC48A1-201ENST00000442218 TPRNQ4KMQ1 711 aa16.4■□□□□ 0.22
SLC48A1-201ENST00000442218 TECPR2O15040 1411 aa16.39■□□□□ 0.21
SLC48A1-201ENST00000442218 ZBTB7BO15156 539 aaPredicted RBP16.39■□□□□ 0.21
SLC48A1-201ENST00000442218 GAS2L3Q86XJ1 694 aa16.39■□□□□ 0.21
SLC48A1-201ENST00000442218 USP32Q8NFA0 1604 aa16.39■□□□□ 0.21
SLC48A1-201ENST00000442218 SSFA2P28290 1259 aa16.39■□□□□ 0.21
SLC48A1-201ENST00000442218 TWISTNBQ3B726 338 aaPredicted RBP16.39■□□□□ 0.21
SLC48A1-201ENST00000442218 MCM10Q7L590 875 aa16.38■□□□□ 0.21
SLC48A1-201ENST00000442218 MED14O60244 1454 aa16.38■□□□□ 0.21
SLC48A1-201ENST00000442218 COL3A1P02461 1466 aaPredicted RBP16.38■□□□□ 0.21
SLC48A1-201ENST00000442218 NCLP19338 710 aaKnown RBP16.38■□□□□ 0.21
SLC48A1-201ENST00000442218 ZNF692Q9BU19 519 aaPredicted RBP16.38■□□□□ 0.21
SLC48A1-201ENST00000442218 FAM135BQ49AJ0 1406 aa16.38■□□□□ 0.21
SLC48A1-201ENST00000442218 PRR36Q9H6K5 1346 aa16.38■□□□□ 0.21
SLC48A1-201ENST00000442218 KNDC1Q76NI1 1749 aa16.38■□□□□ 0.21
SLC48A1-201ENST00000442218 PPIP5K1Q6PFW1 1433 aa16.37■□□□□ 0.21
SLC48A1-201ENST00000442218 CPS1P31327 1500 aa16.37■□□□□ 0.21
SLC48A1-201ENST00000442218 TSHZ3Q63HK5 1081 aa16.37■□□□□ 0.21
SLC48A1-201ENST00000442218 MRPL50Q8N5N7 158 aaKnown RBP16.37■□□□□ 0.21
SLC48A1-201ENST00000442218 GAS2L2Q8NHY3 880 aa16.37■□□□□ 0.21
SLC48A1-201ENST00000442218 AAMPQ13685 434 aa16.37■□□□□ 0.21
SLC48A1-201ENST00000442218 SIRT1Q96EB6 747 aa16.37■□□□□ 0.21
SLC48A1-201ENST00000442218 KIF2CQ99661 725 aa16.37■□□□□ 0.21
SLC48A1-201ENST00000442218 NECTIN2Q92692 538 aa16.36■□□□□ 0.21
SLC48A1-201ENST00000442218 AMOTL2Q9Y2J4 779 aa16.36■□□□□ 0.21
SLC48A1-201ENST00000442218 FOXO3O43524 673 aa16.36■□□□□ 0.21
SLC48A1-201ENST00000442218 FCHSD2O94868 740 aa16.36■□□□□ 0.21
SLC48A1-201ENST00000442218 HSP90AB2PQ58FF8 381 aa16.36■□□□□ 0.21
SLC48A1-201ENST00000442218 NSD2O96028 1365 aa16.36■□□□□ 0.21
SLC48A1-201ENST00000442218 NFE2L2Q16236 605 aa16.35■□□□□ 0.21
SLC48A1-201ENST00000442218 NOL8Q76FK4 1167 aaKnown RBP16.35■□□□□ 0.21
SLC48A1-201ENST00000442218 CEP170BQ9Y4F5 1589 aaPredicted RBP16.35■□□□□ 0.21
SLC48A1-201ENST00000442218 ADAMTSL3P82987 1691 aa16.35■□□□□ 0.21
SLC48A1-201ENST00000442218 IL13P35225 146 aa16.35■□□□□ 0.21
SLC48A1-201ENST00000442218 SULT6B1Q6IMI4 303 aa16.35■□□□□ 0.21
SLC48A1-201ENST00000442218 PKP1Q13835 747 aa16.35■□□□□ 0.21
SLC48A1-201ENST00000442218 SLC4A10Q6U841 1118 aa16.34■□□□□ 0.21
SLC48A1-201ENST00000442218 COG3Q96JB2 828 aa16.34■□□□□ 0.21
SLC48A1-201ENST00000442218 TBX22Q9Y458 520 aa16.34■□□□□ 0.21
SLC48A1-201ENST00000442218 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.34■□□□□ 0.21
SLC48A1-201ENST00000442218 GSPT1P15170 499 aaKnown RBP16.34■□□□□ 0.21
SLC48A1-201ENST00000442218 GRPEL1Q9HAV7 217 aa16.34■□□□□ 0.21
SLC48A1-201ENST00000442218 LRRC7Q96NW7 1537 aa16.33■□□□□ 0.21
SLC48A1-201ENST00000442218 CT47B1P0C2W7 299 aaPredicted RBP16.33■□□□□ 0.21
SLC48A1-201ENST00000442218 FOXD4L6Q3SYB3 417 aaPredicted RBP16.33■□□□□ 0.21
SLC48A1-201ENST00000442218 FOXD4L3Q6VB84 417 aaPredicted RBP16.33■□□□□ 0.21
SLC48A1-201ENST00000442218 AK9Q5TCS8 1911 aa16.33■□□□□ 0.2
SLC48A1-201ENST00000442218 ZBTB7CA1YPR0 619 aa16.32■□□□□ 0.2
SLC48A1-201ENST00000442218 ERBB4Q15303 1308 aa16.32■□□□□ 0.2
SLC48A1-201ENST00000442218 FSD2A1L4K1 749 aa16.32■□□□□ 0.2
SLC48A1-201ENST00000442218 F6X3S4 739 aa16.31■□□□□ 0.2
SLC48A1-201ENST00000442218 CCDC61Q9Y6R9 512 aa16.31■□□□□ 0.2
SLC48A1-201ENST00000442218 DTNBO60941 627 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms