RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 ARHGEF10O15013 1369 aa17.17■□□□□ 0.34
ACTN4-204ENST00000440400 PLEKHG5O94827 1062 aa17.16■□□□□ 0.34
ACTN4-204ENST00000440400 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
ACTN4-204ENST00000440400 RTL5Q5HYW3 569 aaPredicted RBP17.15■□□□□ 0.34
ACTN4-204ENST00000440400 CRYBG1Q9Y4K1 1723 aa17.14■□□□□ 0.33
ACTN4-204ENST00000440400 KDRP35968 1356 aa17.14■□□□□ 0.33
ACTN4-204ENST00000440400 EXOC6Q8TAG9 804 aa17.14■□□□□ 0.33
ACTN4-204ENST00000440400 MYH16Q9H6N6 1097 aa17.14■□□□□ 0.33
ACTN4-204ENST00000440400 LMTK3Q96Q04 1460 aa17.13■□□□□ 0.33
ACTN4-204ENST00000440400 FLT4P35916 1363 aa17.13■□□□□ 0.33
ACTN4-204ENST00000440400 U2SURPO15042 1029 aaKnown RBP17.12■□□□□ 0.33
ACTN4-204ENST00000440400 FBLN1P23142 703 aa17.12■□□□□ 0.33
ACTN4-204ENST00000440400 B4GALNT3Q6L9W6 998 aa17.12■□□□□ 0.33
ACTN4-204ENST00000440400 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.12■□□□□ 0.33
ACTN4-204ENST00000440400 MAPK8IP3Q9UPT6 1336 aa17.12■□□□□ 0.33
ACTN4-204ENST00000440400 NFE2L2Q16236 605 aa17.12■□□□□ 0.33
ACTN4-204ENST00000440400 RRP7AQ9Y3A4 280 aaKnown RBP17.12■□□□□ 0.33
ACTN4-204ENST00000440400 EIF4A2Q14240 407 aaKnown RBP17.1■□□□□ 0.33
ACTN4-204ENST00000440400 NCAPD2Q15021 1401 aa17.1■□□□□ 0.33
ACTN4-204ENST00000440400 PDE3AQ14432 1141 aa17.1■□□□□ 0.33
ACTN4-204ENST00000440400 RRS1Q15050 365 aaKnown RBP17.1■□□□□ 0.33
ACTN4-204ENST00000440400 LMO7Q8WWI1 1683 aa17.1■□□□□ 0.33
ACTN4-204ENST00000440400 PRKAR2BP31323 418 aa17.1■□□□□ 0.33
ACTN4-204ENST00000440400 RARSP54136 660 aaKnown RBP17.1■□□□□ 0.33
ACTN4-204ENST00000440400 C1orf167Q5SNV9 1468 aa17.09■□□□□ 0.33
ACTN4-204ENST00000440400 PMFBP1Q8TBY8 1022 aa17.09■□□□□ 0.33
ACTN4-204ENST00000440400 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
ACTN4-204ENST00000440400 PHF8Q9UPP1 1060 aa17.09■□□□□ 0.33
ACTN4-204ENST00000440400 ABCC6O95255 1503 aa17.09■□□□□ 0.33
ACTN4-204ENST00000440400 MAP3K19Q56UN5 1328 aa17.08■□□□□ 0.33
ACTN4-204ENST00000440400 ZNF853P0CG23 659 aa17.08■□□□□ 0.33
ACTN4-204ENST00000440400 C20orf194Q5TEA3 1177 aa17.08■□□□□ 0.32
ACTN4-204ENST00000440400 NGDNQ8NEJ9 315 aaKnown RBP17.08■□□□□ 0.32
ACTN4-204ENST00000440400 PLIN1O60240 522 aa17.08■□□□□ 0.32
ACTN4-204ENST00000440400 KDM2BQ8NHM5 1336 aa17.07■□□□□ 0.32
ACTN4-204ENST00000440400 BRPF1P55201 1214 aaPredicted RBP17.07■□□□□ 0.32
ACTN4-204ENST00000440400 RIPK4P57078 832 aa17.07■□□□□ 0.32
ACTN4-204ENST00000440400 MED1Q15648 1581 aaPredicted RBP17.07■□□□□ 0.32
ACTN4-204ENST00000440400 PHACTR3Q96KR7 559 aa17.07■□□□□ 0.32
ACTN4-204ENST00000440400 IGSF1Q8N6C5 1336 aa17.06■□□□□ 0.32
ACTN4-204ENST00000440400 BCAR3O75815 825 aa17.05■□□□□ 0.32
ACTN4-204ENST00000440400 AAMPQ13685 434 aa17.05■□□□□ 0.32
ACTN4-204ENST00000440400 NUTM2FA1L443 756 aa17.05■□□□□ 0.32
ACTN4-204ENST00000440400 USP19O94966 1318 aa17.04■□□□□ 0.32
ACTN4-204ENST00000440400 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
ACTN4-204ENST00000440400 LMOD3Q0VAK6 560 aa17.03■□□□□ 0.32
ACTN4-204ENST00000440400 NEUROD2Q15784 382 aa17.03■□□□□ 0.32
ACTN4-204ENST00000440400 ZNF428Q96B54 188 aa17.03■□□□□ 0.32
ACTN4-204ENST00000440400 IFT57Q9NWB7 429 aa17.03■□□□□ 0.32
ACTN4-204ENST00000440400 COL18A1P39060 1754 aa17.02■□□□□ 0.32
ACTN4-204ENST00000440400 ADAMTS7Q9UKP4 1686 aa17.02■□□□□ 0.31
ACTN4-204ENST00000440400 FAM208AQ9UK61 1670 aaKnown RBP17.01■□□□□ 0.31
ACTN4-204ENST00000440400 HSP90AB2PQ58FF8 381 aa17.01■□□□□ 0.31
ACTN4-204ENST00000440400 PPM1GO15355 546 aaPredicted RBP17.01■□□□□ 0.31
ACTN4-204ENST00000440400 CRB1P82279 1406 aa17.01■□□□□ 0.31
ACTN4-204ENST00000440400 HMOX1P09601 288 aa17■□□□□ 0.31
ACTN4-204ENST00000440400 ALDH1L2Q3SY69 923 aa17■□□□□ 0.31
ACTN4-204ENST00000440400 C19orf44Q9H6X5 657 aa17■□□□□ 0.31
ACTN4-204ENST00000440400 PXDNQ92626 1479 aa17■□□□□ 0.31
ACTN4-204ENST00000440400 KDM4FA0A1W2PPD8 638 aa16.99■□□□□ 0.31
ACTN4-204ENST00000440400 HOXC9P31274 260 aa16.99■□□□□ 0.31
ACTN4-204ENST00000440400 RGPD2P0DJD1 1756 aa16.99■□□□□ 0.31
ACTN4-204ENST00000440400 NEFMP07197 916 aa16.98■□□□□ 0.31
ACTN4-204ENST00000440400 N4BP2Q86UW6 1770 aaPredicted RBP16.98■□□□□ 0.31
ACTN4-204ENST00000440400 TMEM94Q12767 1356 aa16.97■□□□□ 0.31
ACTN4-204ENST00000440400 NLRP6P59044 892 aa16.97■□□□□ 0.31
ACTN4-204ENST00000440400 EXOSC9Q06265 439 aaKnown RBP16.97■□□□□ 0.31
ACTN4-204ENST00000440400 GNAI1P63096 354 aa16.97■□□□□ 0.31
ACTN4-204ENST00000440400 AEBP1Q8IUX7 1158 aa16.97■□□□□ 0.31
ACTN4-204ENST00000440400 TSR2Q969E8 191 aaKnown RBP16.97■□□□□ 0.31
ACTN4-204ENST00000440400 CFAP44Q96MT7 982 aa16.97■□□□□ 0.31
ACTN4-204ENST00000440400 PLEKHG2Q9H7P9 1386 aa16.97■□□□□ 0.31
ACTN4-204ENST00000440400 PKNOX2Q96KN3 472 aa16.96■□□□□ 0.31
ACTN4-204ENST00000440400 VIRMAQ69YN4 1812 aaKnown RBP16.96■□□□□ 0.31
ACTN4-204ENST00000440400 SULT6B1Q6IMI4 303 aa16.95■□□□□ 0.3
ACTN4-204ENST00000440400 ABTB2Q8N961 1025 aa16.95■□□□□ 0.3
ACTN4-204ENST00000440400 KCNH5Q8NCM2 988 aa16.95■□□□□ 0.3
ACTN4-204ENST00000440400 KIAA0232Q92628 1395 aa16.95■□□□□ 0.3
ACTN4-204ENST00000440400 KDM3BQ7LBC6 1761 aa16.95■□□□□ 0.3
ACTN4-204ENST00000440400 ABCA3Q99758 1704 aa16.95■□□□□ 0.3
ACTN4-204ENST00000440400 HTATSF1O43719 755 aaKnown RBP16.95■□□□□ 0.3
ACTN4-204ENST00000440400 CENPQQ7L2Z9 268 aaPredicted RBP16.95■□□□□ 0.3
ACTN4-204ENST00000440400 PROSER2Q86WR7 435 aaPredicted RBP16.95■□□□□ 0.3
ACTN4-204ENST00000440400 IP6K1Q92551 441 aa16.95■□□□□ 0.3
ACTN4-204ENST00000440400 ZBTB47Q9UFB7 747 aaPredicted RBP16.94■□□□□ 0.3
ACTN4-204ENST00000440400 SIPA1L3O60292 1781 aaPredicted RBP16.94■□□□□ 0.3
ACTN4-204ENST00000440400 ESCO1Q5FWF5 840 aa16.94■□□□□ 0.3
ACTN4-204ENST00000440400 EYA1Q99502 592 aa16.94■□□□□ 0.3
ACTN4-204ENST00000440400 NHSL1Q5SYE7 1610 aa16.93■□□□□ 0.3
ACTN4-204ENST00000440400 RGPD5Q99666 1765 aa16.93■□□□□ 0.3
ACTN4-204ENST00000440400 MSH6P52701 1360 aa16.93■□□□□ 0.3
ACTN4-204ENST00000440400 ORAI2Q96SN7 254 aa16.93■□□□□ 0.3
ACTN4-204ENST00000440400 OVOS2A0A0G2JMS6 1433 aa16.92■□□□□ 0.3
ACTN4-204ENST00000440400 BRPF3Q9ULD4 1205 aa16.92■□□□□ 0.3
ACTN4-204ENST00000440400 MS4A1P11836 297 aa16.92■□□□□ 0.3
ACTN4-204ENST00000440400 MBIPQ9NS73 344 aa16.92■□□□□ 0.3
ACTN4-204ENST00000440400 SSH1Q8WYL5 1049 aa16.91■□□□□ 0.3
ACTN4-204ENST00000440400 CHL1O00533 1208 aa16.91■□□□□ 0.3
ACTN4-204ENST00000440400 VAMP4O75379 141 aa16.91■□□□□ 0.3
ACTN4-204ENST00000440400 ANP32AP39687 249 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms