RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 ITPRIPQ8IWB1 547 aa10.11□□□□□ -0.79
APP-209ENST00000440126 DLC1Q96QB1 1528 aa10.11□□□□□ -0.79
APP-209ENST00000440126 TTC21BQ7Z4L5 1316 aa10.11□□□□□ -0.79
APP-209ENST00000440126 NEFMP07197 916 aa10.11□□□□□ -0.79
APP-209ENST00000440126 LTV1Q96GA3 475 aaPredicted RBP10.11□□□□□ -0.79
APP-209ENST00000440126 EDC4Q6P2E9 1401 aaKnown RBP10.11□□□□□ -0.79
APP-209ENST00000440126 TRIM27P14373 513 aa10.11□□□□□ -0.79
APP-209ENST00000440126 CCDC27Q2M243 656 aa10.11□□□□□ -0.79
APP-209ENST00000440126 ANKRD26Q9UPS8 1709 aa10.1□□□□□ -0.79
APP-209ENST00000440126 IPO9Q96P70 1041 aaKnown RBP10.1□□□□□ -0.79
APP-209ENST00000440126 BRPF3Q9ULD4 1205 aa10.1□□□□□ -0.79
APP-209ENST00000440126 C3P01024 1663 aa10.1□□□□□ -0.79
APP-209ENST00000440126 FCHSD2O94868 740 aa10.1□□□□□ -0.79
APP-209ENST00000440126 PDE3AQ14432 1141 aa10.1□□□□□ -0.79
APP-209ENST00000440126 MCM10Q7L590 875 aa10.1□□□□□ -0.79
APP-209ENST00000440126 NGEFQ8N5V2 710 aa10.1□□□□□ -0.79
APP-209ENST00000440126 MIS18AQ9NYP9 233 aa10.1□□□□□ -0.79
APP-209ENST00000440126 PNPLA6Q8IY17 1366 aa10.09□□□□□ -0.79
APP-209ENST00000440126 XPCQ01831 940 aaPredicted RBP10.09□□□□□ -0.79
APP-209ENST00000440126 EIF4A2Q14240 407 aaKnown RBP10.09□□□□□ -0.79
APP-209ENST00000440126 ZKSCAN2Q63HK3 967 aa10.09□□□□□ -0.79
APP-209ENST00000440126 C1orf115Q9H7X2 142 aa10.09□□□□□ -0.79
APP-209ENST00000440126 ZBTB47Q9UFB7 747 aaPredicted RBP10.09□□□□□ -0.79
APP-209ENST00000440126 ADGRB2O60241 1585 aa10.09□□□□□ -0.79
APP-209ENST00000440126 FOXO3O43524 673 aa10.09□□□□□ -0.79
APP-209ENST00000440126 DZIP1LQ8IYY4 767 aaKnown RBP10.09□□□□□ -0.79
APP-209ENST00000440126 TMEM57Q8N5G2 664 aa10.09□□□□□ -0.79
APP-209ENST00000440126 PLEKHG1Q9ULL1 1385 aa10.09□□□□□ -0.79
APP-209ENST00000440126 RGPD8O14715 1765 aaPredicted RBP10.09□□□□□ -0.79
APP-209ENST00000440126 NFE2L2Q16236 605 aa10.08□□□□□ -0.8
APP-209ENST00000440126 FER1L4A9Z1Z3 1794 aa10.08□□□□□ -0.8
APP-209ENST00000440126 CDC42BPGQ6DT37 1551 aa10.08□□□□□ -0.8
APP-209ENST00000440126 SETD1BQ9UPS6 1966 aaKnown RBP10.08□□□□□ -0.8
APP-209ENST00000440126 C8orf34Q49A92 452 aa10.07□□□□□ -0.8
APP-209ENST00000440126 THEMISQ8N1K5 641 aaPredicted RBP10.07□□□□□ -0.8
APP-209ENST00000440126 MBIPQ9NS73 344 aa10.07□□□□□ -0.8
APP-209ENST00000440126 FAM135BQ49AJ0 1406 aa10.07□□□□□ -0.8
APP-209ENST00000440126 MED14O60244 1454 aa10.07□□□□□ -0.8
APP-209ENST00000440126 SEC24BO95487 1268 aa10.07□□□□□ -0.8
APP-209ENST00000440126 MVPQ14764 893 aaKnown RBP10.07□□□□□ -0.8
APP-209ENST00000440126 C8orf58Q8NAV2 365 aa10.07□□□□□ -0.8
APP-209ENST00000440126 MS4A1P11836 297 aa10.06□□□□□ -0.8
APP-209ENST00000440126 TAF7LQ5H9L4 462 aa10.06□□□□□ -0.8
APP-209ENST00000440126 TECPR2O15040 1411 aa10.06□□□□□ -0.8
APP-209ENST00000440126 NLRP6P59044 892 aa10.06□□□□□ -0.8
APP-209ENST00000440126 USHBP1Q8N6Y0 703 aa10.06□□□□□ -0.8
APP-209ENST00000440126 PDZRN3Q9UPQ7 1066 aa10.06□□□□□ -0.8
APP-209ENST00000440126 ITSN1Q15811 1721 aa10.06□□□□□ -0.8
APP-209ENST00000440126 ZNF692Q9BU19 519 aaPredicted RBP10.06□□□□□ -0.8
APP-209ENST00000440126 MAP3K19Q56UN5 1328 aa10.05□□□□□ -0.8
APP-209ENST00000440126 ATF7IPQ6VMQ6 1270 aa10.05□□□□□ -0.8
APP-209ENST00000440126 AMPHP49418 695 aa10.05□□□□□ -0.8
APP-209ENST00000440126 LMOD2Q6P5Q4 547 aa10.05□□□□□ -0.8
APP-209ENST00000440126 USP6P35125 1406 aa10.04□□□□□ -0.8
APP-209ENST00000440126 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
APP-209ENST00000440126 TBX22Q9Y458 520 aa10.04□□□□□ -0.8
APP-209ENST00000440126 MON2Q7Z3U7 1717 aa10.04□□□□□ -0.8
APP-209ENST00000440126 NECTIN2Q92692 538 aa10.04□□□□□ -0.8
APP-209ENST00000440126 PLEKHG3A1L390 1219 aa10.03□□□□□ -0.8
APP-209ENST00000440126 PNNQ9H307 717 aaKnown RBP10.03□□□□□ -0.8
APP-209ENST00000440126 RIMS1Q86UR5 1692 aaKnown RBP10.03□□□□□ -0.8
APP-209ENST00000440126 VAMP4O75379 141 aa10.03□□□□□ -0.8
APP-209ENST00000440126 TWISTNBQ3B726 338 aaPredicted RBP10.03□□□□□ -0.8
APP-209ENST00000440126 ABTB2Q8N961 1025 aa10.03□□□□□ -0.8
APP-209ENST00000440126 SIRT1Q96EB6 747 aa10.03□□□□□ -0.8
APP-209ENST00000440126 KNDC1Q76NI1 1749 aa10.03□□□□□ -0.8
APP-209ENST00000440126 CDK12Q9NYV4 1490 aaPredicted RBP10.03□□□□□ -0.8
APP-209ENST00000440126 DLG5Q8TDM6 1919 aa10.03□□□□□ -0.8
APP-209ENST00000440126 AKAP12Q02952 1782 aa10.02□□□□□ -0.8
APP-209ENST00000440126 CHMP4BQ9H444 224 aaKnown RBP10.02□□□□□ -0.8
APP-209ENST00000440126 PEAK1Q9H792 1746 aa10.01□□□□□ -0.81
APP-209ENST00000440126 ESCO1Q5FWF5 840 aa10.01□□□□□ -0.81
APP-209ENST00000440126 DIP2AQ14689 1571 aa10.01□□□□□ -0.81
APP-209ENST00000440126 AATKQ6ZMQ8 1374 aa10.01□□□□□ -0.81
APP-209ENST00000440126 MTHFSDQ2M296 383 aaKnown RBP10.01□□□□□ -0.81
APP-209ENST00000440126 EYA1Q99502 592 aa10.01□□□□□ -0.81
APP-209ENST00000440126 OVOS2A0A0J9YW53 1432 aa10□□□□□ -0.81
APP-209ENST00000440126 OVOS2Q6IE36 1432 aa10□□□□□ -0.81
APP-209ENST00000440126 HAP1P54257 671 aaPredicted RBP10□□□□□ -0.81
APP-209ENST00000440126 GNAI1P63096 354 aa10□□□□□ -0.81
APP-209ENST00000440126 LNPKQ9C0E8 428 aa10□□□□□ -0.81
APP-209ENST00000440126 RWDD1Q9H446 243 aaPredicted RBP10□□□□□ -0.81
APP-209ENST00000440126 IL16Q14005 1332 aa10□□□□□ -0.81
APP-209ENST00000440126 APBB1O00213 710 aa10□□□□□ -0.81
APP-209ENST00000440126 MRPL50Q8N5N7 158 aaKnown RBP10□□□□□ -0.81
APP-209ENST00000440126 ANKLE2Q86XL3 938 aa9.99□□□□□ -0.81
APP-209ENST00000440126 ORAI2Q96SN7 254 aa9.99□□□□□ -0.81
APP-209ENST00000440126 ARHGAP23Q9P227 1491 aa9.99□□□□□ -0.81
APP-209ENST00000440126 DDX17Q92841 729 aaKnown RBP9.99□□□□□ -0.81
APP-209ENST00000440126 CFAP44Q96MT7 982 aa9.99□□□□□ -0.81
APP-209ENST00000440126 IFT57Q9NWB7 429 aa9.99□□□□□ -0.81
APP-209ENST00000440126 DDX19BQ9UMR2 479 aa9.99□□□□□ -0.81
APP-209ENST00000440126 SLIT1O75093 1534 aa9.98□□□□□ -0.81
APP-209ENST00000440126 CHMP4AQ9BY43 222 aa9.98□□□□□ -0.81
APP-209ENST00000440126 ZNF853P0CG23 659 aa9.98□□□□□ -0.81
APP-209ENST00000440126 USP35Q9P2H5 1018 aa9.98□□□□□ -0.81
APP-209ENST00000440126 KIF16BQ96L93 1317 aa9.98□□□□□ -0.81
APP-209ENST00000440126 ZBTB40Q9NUA8 1239 aa9.97□□□□□ -0.81
APP-209ENST00000440126 PHF8Q9UPP1 1060 aa9.97□□□□□ -0.81
APP-209ENST00000440126 CEP170BQ9Y4F5 1589 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 1319.7 ms