RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 TMC1Q8TDI8 760 aa22.98■■□□□ 1.27
SNRPD3-204ENST00000439775 AXIN2Q9Y2T1 843 aa22.98■■□□□ 1.27
SNRPD3-204ENST00000439775 WDR17Q8IZU2 1322 aa22.98■■□□□ 1.27
SNRPD3-204ENST00000439775 ST20-MTHFSA0A0A6YYL1 179 aa22.97■■□□□ 1.27
SNRPD3-204ENST00000439775 SLC12A5Q9H2X9 1139 aa22.97■■□□□ 1.27
SNRPD3-204ENST00000439775 A0A1W2PP64 1363 aa22.97■■□□□ 1.27
SNRPD3-204ENST00000439775 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.96■■□□□ 1.27
SNRPD3-204ENST00000439775 TERF2IPQ9NYB0 399 aa22.96■■□□□ 1.27
SNRPD3-204ENST00000439775 TOM1L2Q6ZVM7 507 aa22.95■■□□□ 1.26
SNRPD3-204ENST00000439775 LRRC37A3O60309 1634 aa22.94■■□□□ 1.26
SNRPD3-204ENST00000439775 SOX12O15370 315 aa22.94■■□□□ 1.26
SNRPD3-204ENST00000439775 EN1Q05925 392 aaPredicted RBP22.94■■□□□ 1.26
SNRPD3-204ENST00000439775 NME9Q86XW9 330 aa22.94■■□□□ 1.26
SNRPD3-204ENST00000439775 CLSPNQ9HAW4 1339 aa22.93■■□□□ 1.26
SNRPD3-204ENST00000439775 TRIM37O94972 964 aa22.93■■□□□ 1.26
SNRPD3-204ENST00000439775 WNK3Q9BYP7 1800 aa22.93■■□□□ 1.26
SNRPD3-204ENST00000439775 USP47Q96K76 1375 aa22.92■■□□□ 1.26
SNRPD3-204ENST00000439775 C11orf95C9JLR9 678 aaPredicted RBP22.92■■□□□ 1.26
SNRPD3-204ENST00000439775 OVOS2A0A0J9YW53 1432 aa22.91■■□□□ 1.26
SNRPD3-204ENST00000439775 OVOS2Q6IE36 1432 aa22.91■■□□□ 1.26
SNRPD3-204ENST00000439775 PARD3Q8TEW0 1356 aa22.91■■□□□ 1.26
SNRPD3-204ENST00000439775 TIMELESSQ9UNS1 1208 aa22.91■■□□□ 1.26
SNRPD3-204ENST00000439775 OVOS2A0A0G2JMS6 1433 aa22.91■■□□□ 1.26
SNRPD3-204ENST00000439775 CDCA7Q9BWT1 371 aaPredicted RBP22.9■■□□□ 1.26
SNRPD3-204ENST00000439775 CARD10Q9BWT7 1032 aa22.9■■□□□ 1.26
SNRPD3-204ENST00000439775 PEAK1Q9H792 1746 aa22.9■■□□□ 1.26
SNRPD3-204ENST00000439775 RGPD5Q99666 1765 aa22.89■■□□□ 1.26
SNRPD3-204ENST00000439775 DDB1Q16531 1140 aa22.88■■□□□ 1.25
SNRPD3-204ENST00000439775 CCDC7Q96M83 1385 aa22.88■■□□□ 1.25
SNRPD3-204ENST00000439775 CSB-PGBD3P0DP91 1061 aa22.87■■□□□ 1.25
SNRPD3-204ENST00000439775 CAMKK2Q96RR4 588 aa22.87■■□□□ 1.25
SNRPD3-204ENST00000439775 LTN1O94822 1766 aa22.86■■□□□ 1.25
SNRPD3-204ENST00000439775 APBA3O96018 575 aa22.86■■□□□ 1.25
SNRPD3-204ENST00000439775 TMF1P82094 1093 aa22.86■■□□□ 1.25
SNRPD3-204ENST00000439775 EZH2Q15910 746 aaKnown RBP22.86■■□□□ 1.25
SNRPD3-204ENST00000439775 ANKRD36BQ8N2N9 1353 aa22.86■■□□□ 1.25
SNRPD3-204ENST00000439775 ERBB3P21860 1342 aa22.85■■□□□ 1.25
SNRPD3-204ENST00000439775 BCL9O00512 1426 aa22.85■■□□□ 1.25
SNRPD3-204ENST00000439775 LRP5O75197 1615 aa22.85■■□□□ 1.25
SNRPD3-204ENST00000439775 RREB1Q92766 1687 aa22.84■■□□□ 1.25
SNRPD3-204ENST00000439775 PSDA5PKW4 1024 aaPredicted RBP22.81■■□□□ 1.24
SNRPD3-204ENST00000439775 TNS2Q63HR2 1409 aa22.81■■□□□ 1.24
SNRPD3-204ENST00000439775 CDCA8Q53HL2 280 aa22.8■■□□□ 1.24
SNRPD3-204ENST00000439775 PCGF6Q9BYE7 350 aa22.8■■□□□ 1.24
SNRPD3-204ENST00000439775 RGPD3A6NKT7 1758 aaPredicted RBP22.79■■□□□ 1.24
SNRPD3-204ENST00000439775 RGPD4Q7Z3J3 1758 aa22.79■■□□□ 1.24
SNRPD3-204ENST00000439775 COG3Q96JB2 828 aa22.79■■□□□ 1.24
SNRPD3-204ENST00000439775 NUP188Q5SRE5 1749 aa22.79■■□□□ 1.24
SNRPD3-204ENST00000439775 SBF2Q86WG5 1849 aa22.78■■□□□ 1.24
SNRPD3-204ENST00000439775 MARCH10Q8NA82 808 aaPredicted RBP22.78■■□□□ 1.24
SNRPD3-204ENST00000439775 R3HDM1Q15032 1099 aaKnown RBP22.77■■□□□ 1.24
SNRPD3-204ENST00000439775 ANKRD24Q8TF21 1146 aa22.77■■□□□ 1.24
SNRPD3-204ENST00000439775 IP6K1Q92551 441 aa22.76■■□□□ 1.23
SNRPD3-204ENST00000439775 NLRP2Q9NX02 1062 aa22.76■■□□□ 1.23
SNRPD3-204ENST00000439775 FAM208AQ9UK61 1670 aaKnown RBP22.76■■□□□ 1.23
SNRPD3-204ENST00000439775 EXOC5O00471 708 aa22.75■■□□□ 1.23
SNRPD3-204ENST00000439775 BCL11BQ9C0K0 894 aaPredicted RBP22.75■■□□□ 1.23
SNRPD3-204ENST00000439775 PLSCR1O15162 318 aa22.74■■□□□ 1.23
SNRPD3-204ENST00000439775 MYOM1P52179 1685 aa22.73■■□□□ 1.23
SNRPD3-204ENST00000439775 MAP3K19Q56UN5 1328 aa22.73■■□□□ 1.23
SNRPD3-204ENST00000439775 IL2RBP14784 551 aa22.72■■□□□ 1.23
SNRPD3-204ENST00000439775 RTL1A6NKG5 1358 aa22.72■■□□□ 1.23
SNRPD3-204ENST00000439775 FYB1O15117 783 aa22.71■■□□□ 1.23
SNRPD3-204ENST00000439775 HOXC9P31274 260 aa22.7■■□□□ 1.22
SNRPD3-204ENST00000439775 NBPF14Q5TI25 921 aa22.7■■□□□ 1.22
SNRPD3-204ENST00000439775 PTF1AQ7RTS3 328 aa22.68■■□□□ 1.22
SNRPD3-204ENST00000439775 GGNBP2Q9H3C7 697 aa22.68■■□□□ 1.22
SNRPD3-204ENST00000439775 KIF20BQ96Q89 1820 aa22.68■■□□□ 1.22
SNRPD3-204ENST00000439775 NHSQ6T4R5 1651 aa22.68■■□□□ 1.22
SNRPD3-204ENST00000439775 AMPHP49418 695 aa22.66■■□□□ 1.22
SNRPD3-204ENST00000439775 FBLN1P23142 703 aa22.65■■□□□ 1.22
SNRPD3-204ENST00000439775 LTV1Q96GA3 475 aaPredicted RBP22.64■■□□□ 1.21
SNRPD3-204ENST00000439775 NSD3Q9BZ95 1437 aa22.64■■□□□ 1.21
SNRPD3-204ENST00000439775 RRS1Q15050 365 aaKnown RBP22.63■■□□□ 1.21
SNRPD3-204ENST00000439775 CCER1Q8TC90 406 aaPredicted RBP22.63■■□□□ 1.21
SNRPD3-204ENST00000439775 CARD14Q9BXL6 1004 aa22.63■■□□□ 1.21
SNRPD3-204ENST00000439775 KIF24Q5T7B8 1368 aa22.63■■□□□ 1.21
SNRPD3-204ENST00000439775 SMG6Q86US8 1419 aaKnown RBP22.61■■□□□ 1.21
SNRPD3-204ENST00000439775 KCNQ2O43526 872 aa22.6■■□□□ 1.21
SNRPD3-204ENST00000439775 PROM2Q8N271 834 aa22.6■■□□□ 1.21
SNRPD3-204ENST00000439775 FLT4P35916 1363 aa22.6■■□□□ 1.21
SNRPD3-204ENST00000439775 ANO8Q9HCE9 1232 aaPredicted RBP22.59■■□□□ 1.21
SNRPD3-204ENST00000439775 INSRP06213 1382 aa22.59■■□□□ 1.21
SNRPD3-204ENST00000439775 MEGF6O75095 1541 aa22.58■■□□□ 1.21
SNRPD3-204ENST00000439775 EIF4G2P78344 907 aaKnown RBP eCLIP22.58■■□□□ 1.21
SNRPD3-204ENST00000439775 TXNRD1Q16881 649 aa22.58■■□□□ 1.21
SNRPD3-204ENST00000439775 ACSBG1Q96GR2 724 aa22.57■■□□□ 1.2
SNRPD3-204ENST00000439775 RGPD2P0DJD1 1756 aa22.56■■□□□ 1.2
SNRPD3-204ENST00000439775 CGNL1Q0VF96 1302 aa22.56■■□□□ 1.2
SNRPD3-204ENST00000439775 CASZ1Q86V15 1759 aa22.55■■□□□ 1.2
SNRPD3-204ENST00000439775 BTAF1O14981 1849 aa22.54■■□□□ 1.2
SNRPD3-204ENST00000439775 SHANK3Q9BYB0 1731 aa22.54■■□□□ 1.2
SNRPD3-204ENST00000439775 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
SNRPD3-204ENST00000439775 NBPF6Q5VWK0 638 aa22.54■■□□□ 1.2
SNRPD3-204ENST00000439775 NBPF4Q96M43 638 aa22.54■■□□□ 1.2
SNRPD3-204ENST00000439775 HSPA5P11021 654 aaKnown RBP22.53■■□□□ 1.2
SNRPD3-204ENST00000439775 HSP90AB2PQ58FF8 381 aa22.53■■□□□ 1.2
SNRPD3-204ENST00000439775 DDX54Q8TDD1 881 aaKnown RBP22.53■■□□□ 1.2
SNRPD3-204ENST00000439775 ZCRB1Q8TBF4 217 aaKnown RBP22.52■■□□□ 1.2
SNRPD3-204ENST00000439775 SPON1Q9HCB6 807 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms