RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 C1orf141Q5JVX7 400 aa8.09□□□□□ -1.11
CSDE1-205ENST00000438362 LRRCC1Q9C099 1032 aa8.09□□□□□ -1.11
CSDE1-205ENST00000438362 H3BQV1 296 aa8.09□□□□□ -1.11
CSDE1-205ENST00000438362 NLRP6P59044 892 aa8.09□□□□□ -1.11
CSDE1-205ENST00000438362 IFFO2Q5TF58 517 aa8.09□□□□□ -1.11
CSDE1-205ENST00000438362 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-205ENST00000438362 SSFA2P28290 1259 aa8.09□□□□□ -1.11
CSDE1-205ENST00000438362 GNL2Q13823 731 aaKnown RBP8.09□□□□□ -1.11
CSDE1-205ENST00000438362 DCTN1Q14203 1278 aa8.09□□□□□ -1.11
CSDE1-205ENST00000438362 WAPLQ7Z5K2 1190 aa8.09□□□□□ -1.11
CSDE1-205ENST00000438362 PUS7Q96PZ0 661 aaKnown RBP8.09□□□□□ -1.11
CSDE1-205ENST00000438362 EMILIN1Q9Y6C2 1016 aa8.09□□□□□ -1.11
CSDE1-205ENST00000438362 DCAF8L1A6NGE4 600 aa8.08□□□□□ -1.12
CSDE1-205ENST00000438362 FYB1O15117 783 aa8.08□□□□□ -1.12
CSDE1-205ENST00000438362 XRCC6P12956 609 aaKnown RBP eCLIP8.08□□□□□ -1.12
CSDE1-205ENST00000438362 RNF20Q5VTR2 975 aa8.08□□□□□ -1.12
CSDE1-205ENST00000438362 CNTROBQ8N137 903 aa8.08□□□□□ -1.12
CSDE1-205ENST00000438362 FAM184AQ8NB25 1140 aa8.08□□□□□ -1.12
CSDE1-205ENST00000438362 TSPY26PQ9H489 355 aa8.08□□□□□ -1.12
CSDE1-205ENST00000438362 CD109Q6YHK3 1445 aa8.08□□□□□ -1.12
CSDE1-205ENST00000438362 ZSCAN30Q86W11 494 aa8.08□□□□□ -1.12
CSDE1-205ENST00000438362 SMC5Q8IY18 1101 aa8.08□□□□□ -1.12
CSDE1-205ENST00000438362 NUDT16Q96DE0 195 aaKnown RBP8.08□□□□□ -1.12
CSDE1-205ENST00000438362 ABCC10Q5T3U5 1492 aa8.08□□□□□ -1.12
CSDE1-205ENST00000438362 GOLGA6L19H0YKK7 550 aa8.08□□□□□ -1.12
CSDE1-205ENST00000438362 NEXNQ0ZGT2 675 aa8.08□□□□□ -1.12
CSDE1-205ENST00000438362 G3BP1Q13283 466 aaKnown RBP eCLIP8.08□□□□□ -1.121e-6■■□□□ 12.6
CSDE1-205ENST00000438362 GORABQ5T7V8 394 aa8.08□□□□□ -1.12
CSDE1-205ENST00000438362 CLASRPQ8N2M8 674 aaKnown RBP8.08□□□□□ -1.12
CSDE1-205ENST00000438362 ARHGAP45Q92619 1136 aa8.08□□□□□ -1.12
CSDE1-205ENST00000438362 TPM4P67936 248 aa8.07□□□□□ -1.12
CSDE1-205ENST00000438362 NME9Q86XW9 330 aa8.07□□□□□ -1.12
CSDE1-205ENST00000438362 MAP7D2Q96T17 732 aa8.07□□□□□ -1.12
CSDE1-205ENST00000438362 SRCIN1Q9C0H9 1055 aa8.07□□□□□ -1.12
CSDE1-205ENST00000438362 DDX58O95786 925 aaKnown RBP8.07□□□□□ -1.12
CSDE1-205ENST00000438362 SNX21Q969T3 373 aa8.07□□□□□ -1.12
CSDE1-205ENST00000438362 WDR33Q9C0J8 1336 aaKnown RBP8.07□□□□□ -1.12
CSDE1-205ENST00000438362 BECN2A8MW95 431 aa8.07□□□□□ -1.12
CSDE1-205ENST00000438362 SF3A1Q15459 793 aaKnown RBP8.07□□□□□ -1.12
CSDE1-205ENST00000438362 HDGFL1Q5TGJ6 251 aa8.07□□□□□ -1.12
CSDE1-205ENST00000438362 EXOC6BQ9Y2D4 811 aa8.07□□□□□ -1.12
CSDE1-205ENST00000438362 ARHGEF5Q12774 1597 aa8.06□□□□□ -1.12
CSDE1-205ENST00000438362 SMARCA5O60264 1052 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-205ENST00000438362 LETM1O95202 739 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-205ENST00000438362 MCM10Q7L590 875 aa8.06□□□□□ -1.12
CSDE1-205ENST00000438362 BICD2Q8TD16 824 aa8.06□□□□□ -1.12
CSDE1-205ENST00000438362 MBIPQ9NS73 344 aa8.06□□□□□ -1.12
CSDE1-205ENST00000438362 ZBTB40Q9NUA8 1239 aa8.06□□□□□ -1.12
CSDE1-205ENST00000438362 MAGI2Q86UL8 1455 aa8.06□□□□□ -1.12
CSDE1-205ENST00000438362 MAST1Q9Y2H9 1570 aa8.06□□□□□ -1.12
CSDE1-205ENST00000438362 ZNF521Q96K83 1311 aa8.06□□□□□ -1.12
CSDE1-205ENST00000438362 NUTM2GQ5VZR2 741 aa8.06□□□□□ -1.12
CSDE1-205ENST00000438362 FIBPO43427 364 aa8.06□□□□□ -1.12
CSDE1-205ENST00000438362 MTERF4Q7Z6M4 381 aaKnown RBP8.06□□□□□ -1.12
CSDE1-205ENST00000438362 TRMT2AQ8IZ69 625 aaKnown RBP8.06□□□□□ -1.12
CSDE1-205ENST00000438362 CHMP4CQ96CF2 233 aa8.06□□□□□ -1.12
CSDE1-205ENST00000438362 PANK2Q9BZ23 570 aa8.06□□□□□ -1.12
CSDE1-205ENST00000438362 RRP9O43818 475 aaKnown RBP8.05□□□□□ -1.12
CSDE1-205ENST00000438362 BAG4O95429 457 aaKnown RBP8.05□□□□□ -1.12
CSDE1-205ENST00000438362 ZNF330Q9Y3S2 320 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-205ENST00000438362 KLHL40Q2TBA0 621 aa8.05□□□□□ -1.12
CSDE1-205ENST00000438362 BCORL1Q5H9F3 1711 aa8.04□□□□□ -1.12
CSDE1-205ENST00000438362 FBLN1P23142 703 aa8.04□□□□□ -1.12
CSDE1-205ENST00000438362 CLCN1P35523 988 aa8.04□□□□□ -1.12
CSDE1-205ENST00000438362 CCDC9Q9Y3X0 531 aaKnown RBP8.04□□□□□ -1.12
CSDE1-205ENST00000438362 CEP170Q5SW79 1584 aa8.04□□□□□ -1.12
CSDE1-205ENST00000438362 SYCE3A1L190 88 aa8.04□□□□□ -1.12
CSDE1-205ENST00000438362 PSMA5P28066 241 aa8.04□□□□□ -1.12
CSDE1-205ENST00000438362 TAF7LQ5H9L4 462 aa8.04□□□□□ -1.12
CSDE1-205ENST00000438362 TTC22Q5TAA0 569 aa8.04□□□□□ -1.12
CSDE1-205ENST00000438362 IL1RAPL2Q9NP60 686 aa8.04□□□□□ -1.12
CSDE1-205ENST00000438362 MIS18AQ9NYP9 233 aa8.04□□□□□ -1.12
CSDE1-205ENST00000438362 WASLO00401 505 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-205ENST00000438362 PDCP20941 246 aa8.04□□□□□ -1.12
CSDE1-205ENST00000438362 FBXO31Q5XUX0 539 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-205ENST00000438362 SASS6Q6UVJ0 657 aa8.04□□□□□ -1.12
CSDE1-205ENST00000438362 MX1P20591 662 aa8.03□□□□□ -1.12
CSDE1-205ENST00000438362 PSME1Q06323 249 aa8.03□□□□□ -1.12
CSDE1-205ENST00000438362 MRPL50Q8N5N7 158 aaKnown RBP8.03□□□□□ -1.12
CSDE1-205ENST00000438362 FAM83GA6ND36 823 aa8.03□□□□□ -1.12
CSDE1-205ENST00000438362 RBM10P98175 930 aaKnown RBP8.03□□□□□ -1.12
CSDE1-205ENST00000438362 ABTB2Q8N961 1025 aa8.03□□□□□ -1.12
CSDE1-205ENST00000438362 UPF3BQ9BZI7 483 aaKnown RBP8.03□□□□□ -1.12
CSDE1-205ENST00000438362 PTPRCP08575 1304 aa8.03□□□□□ -1.12
CSDE1-205ENST00000438362 VAMP4O75379 141 aa8.03□□□□□ -1.12
CSDE1-205ENST00000438362 TPM3P06753 285 aa8.03□□□□□ -1.12
CSDE1-205ENST00000438362 PRKCSHP14314 528 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-205ENST00000438362 HMGN5P82970 282 aaKnown RBP8.03□□□□□ -1.12
CSDE1-205ENST00000438362 F6X3S4 739 aa8.03□□□□□ -1.12
CSDE1-205ENST00000438362 SRGAP3O43295 1099 aa8.03□□□□□ -1.12
CSDE1-205ENST00000438362 RBM42Q9BTD8 480 aaKnown RBP8.03□□□□□ -1.12
CSDE1-205ENST00000438362 FSD1Q9BTV5 496 aa8.03□□□□□ -1.12
CSDE1-205ENST00000438362 PTPRTO14522 1441 aa8.03□□□□□ -1.12
CSDE1-205ENST00000438362 AIMP1Q12904 312 aaKnown RBP8.02□□□□□ -1.13
CSDE1-205ENST00000438362 RAB3GAP1Q15042 981 aa8.02□□□□□ -1.13
CSDE1-205ENST00000438362 POLKQ9UBT6 870 aa8.02□□□□□ -1.13
CSDE1-205ENST00000438362 CYP46A1Q9Y6A2 500 aa8.02□□□□□ -1.13
CSDE1-205ENST00000438362 ABCC2Q92887 1545 aa8.02□□□□□ -1.13
CSDE1-205ENST00000438362 WDR7Q9Y4E6 1490 aa8.02□□□□□ -1.13
CSDE1-205ENST00000438362 HIP1O00291 1037 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms