RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 PSME1Q06323 249 aa14.43□□□□□ -0.1
ERGIC3-207ENST00000438317 FAM98CQ17RN3 349 aaKnown RBP14.43□□□□□ -0.1
ERGIC3-207ENST00000438317 SIRT1Q96EB6 747 aa14.43□□□□□ -0.1
ERGIC3-207ENST00000438317 CABP2Q9NPB3 220 aa14.43□□□□□ -0.1
ERGIC3-207ENST00000438317 PHF8Q9UPP1 1060 aa14.43□□□□□ -0.1
ERGIC3-207ENST00000438317 NRAPQ86VF7 1730 aa14.42□□□□□ -0.1
ERGIC3-207ENST00000438317 FAM182BQ5T319 152 aa14.42□□□□□ -0.1
ERGIC3-207ENST00000438317 RUNDC1Q96C34 613 aa14.42□□□□□ -0.1
ERGIC3-207ENST00000438317 PRAM1Q96QH2 718 aa14.42□□□□□ -0.1
ERGIC3-207ENST00000438317 SBNO1A3KN83 1393 aa14.42□□□□□ -0.1
ERGIC3-207ENST00000438317 FANCIQ9NVI1 1328 aa14.41□□□□□ -0.1
ERGIC3-207ENST00000438317 RGPD1P0DJD0 1748 aa14.41□□□□□ -0.1
ERGIC3-207ENST00000438317 HDGFL2Q7Z4V5 671 aaPredicted RBP14.41□□□□□ -0.1
ERGIC3-207ENST00000438317 EXOC6Q8TAG9 804 aa14.41□□□□□ -0.1
ERGIC3-207ENST00000438317 DISP2A7MBM2 1401 aa14.41□□□□□ -0.1
ERGIC3-207ENST00000438317 A0A0G2JS52 829 aa14.4□□□□□ -0.1
ERGIC3-207ENST00000438317 MTHFSP49914 203 aa14.4□□□□□ -0.1
ERGIC3-207ENST00000438317 EZH2Q15910 746 aaKnown RBP14.4□□□□□ -0.1
ERGIC3-207ENST00000438317 BTG4Q9NY30 223 aa14.4□□□□□ -0.1
ERGIC3-207ENST00000438317 ANKRD26Q9UPS8 1709 aa14.4□□□□□ -0.1
ERGIC3-207ENST00000438317 ARHGEF10O15013 1369 aa14.39□□□□□ -0.11
ERGIC3-207ENST00000438317 TNS1Q9HBL0 1735 aaKnown RBP14.39□□□□□ -0.11
ERGIC3-207ENST00000438317 CCDC146Q8IYE0 955 aa14.39□□□□□ -0.11
ERGIC3-207ENST00000438317 CDK19Q9BWU1 502 aa14.39□□□□□ -0.11
ERGIC3-207ENST00000438317 MINK1Q8N4C8 1332 aaPredicted RBP14.39□□□□□ -0.11
ERGIC3-207ENST00000438317 SAFB2Q14151 953 aaKnown RBP eCLIP14.38□□□□□ -0.11
ERGIC3-207ENST00000438317 CCDC27Q2M243 656 aa14.38□□□□□ -0.11
ERGIC3-207ENST00000438317 LMOD2Q6P5Q4 547 aa14.38□□□□□ -0.11
ERGIC3-207ENST00000438317 WDR63Q8IWG1 891 aa14.38□□□□□ -0.11
ERGIC3-207ENST00000438317 CAMKK2Q96RR4 588 aa14.38□□□□□ -0.11
ERGIC3-207ENST00000438317 PNNQ9H307 717 aaKnown RBP14.37□□□□□ -0.11
ERGIC3-207ENST00000438317 SPATA31A5Q5VU36 1347 aa14.37□□□□□ -0.11
ERGIC3-207ENST00000438317 SPATA31A7Q8IWB4 1347 aa14.37□□□□□ -0.11
ERGIC3-207ENST00000438317 TCERG1O14776 1098 aaKnown RBP14.36□□□□□ -0.11
ERGIC3-207ENST00000438317 YY1P25490 414 aa14.36□□□□□ -0.11
ERGIC3-207ENST00000438317 WWC1Q8IX03 1113 aa14.36□□□□□ -0.11
ERGIC3-207ENST00000438317 THSD7AQ9UPZ6 1657 aa14.36□□□□□ -0.11
ERGIC3-207ENST00000438317 A0A1W2PP64 1363 aa14.35□□□□□ -0.11
ERGIC3-207ENST00000438317 COL14A1Q05707 1796 aaKnown RBP14.35□□□□□ -0.11
ERGIC3-207ENST00000438317 TNNT2P45379 298 aaPredicted RBP14.35□□□□□ -0.11
ERGIC3-207ENST00000438317 PMFBP1Q8TBY8 1022 aa14.35□□□□□ -0.11
ERGIC3-207ENST00000438317 FYB1O15117 783 aa14.34□□□□□ -0.11
ERGIC3-207ENST00000438317 TRPM3Q9HCF6 1732 aaPredicted RBP14.34□□□□□ -0.11
ERGIC3-207ENST00000438317 TCP11L2Q8N4U5 519 aa14.33□□□□□ -0.12
ERGIC3-207ENST00000438317 CRBNQ96SW2 442 aa14.33□□□□□ -0.12
ERGIC3-207ENST00000438317 KIF20BQ96Q89 1820 aa14.33□□□□□ -0.12
ERGIC3-207ENST00000438317 ALS2Q96Q42 1657 aa14.33□□□□□ -0.12
ERGIC3-207ENST00000438317 ATP7BP35670 1465 aa14.32□□□□□ -0.12
ERGIC3-207ENST00000438317 PLIN1O60240 522 aa14.32□□□□□ -0.12
ERGIC3-207ENST00000438317 TRIM37O94972 964 aa14.32□□□□□ -0.12
ERGIC3-207ENST00000438317 MS4A1P11836 297 aa14.32□□□□□ -0.12
ERGIC3-207ENST00000438317 CABP1Q9NZU7 370 aa14.32□□□□□ -0.12
ERGIC3-207ENST00000438317 CD163L1Q9NR16 1453 aa14.31□□□□□ -0.12
ERGIC3-207ENST00000438317 ANKARQ7Z5J8 1434 aa14.31□□□□□ -0.12
ERGIC3-207ENST00000438317 CRYBG1Q9Y4K1 1723 aa14.3□□□□□ -0.12
ERGIC3-207ENST00000438317 WASLO00401 505 aaPredicted RBP14.3□□□□□ -0.12
ERGIC3-207ENST00000438317 APBA3O96018 575 aa14.3□□□□□ -0.12
ERGIC3-207ENST00000438317 U2AF1L5P0DN76 240 aaPredicted RBP14.3□□□□□ -0.12
ERGIC3-207ENST00000438317 U2AF1Q01081 240 aaKnown RBP eCLIP14.3□□□□□ -0.12
ERGIC3-207ENST00000438317 AAMPQ13685 434 aa14.3□□□□□ -0.12
ERGIC3-207ENST00000438317 PDE3AQ14432 1141 aa14.3□□□□□ -0.12
ERGIC3-207ENST00000438317 FAM196AQ6ZSG2 479 aa14.3□□□□□ -0.12
ERGIC3-207ENST00000438317 SPATA31A1Q5TZJ5 1347 aa14.3□□□□□ -0.12
ERGIC3-207ENST00000438317 ZNF692Q9BU19 519 aaPredicted RBP14.29□□□□□ -0.12
ERGIC3-207ENST00000438317 GGNBP2Q9H3C7 697 aa14.29□□□□□ -0.12
ERGIC3-207ENST00000438317 MYH16Q9H6N6 1097 aa14.29□□□□□ -0.12
ERGIC3-207ENST00000438317 SPINK5Q9NQ38 1064 aaPredicted RBP14.29□□□□□ -0.12
ERGIC3-207ENST00000438317 ADGRB2O60241 1585 aa14.29□□□□□ -0.12
ERGIC3-207ENST00000438317 RREB1Q92766 1687 aa14.29□□□□□ -0.12
ERGIC3-207ENST00000438317 CT47B1P0C2W7 299 aaPredicted RBP14.28□□□□□ -0.12
ERGIC3-207ENST00000438317 MAP2P11137 1827 aaKnown RBP14.27□□□□□ -0.12
ERGIC3-207ENST00000438317 PRR36Q9H6K5 1346 aa14.27□□□□□ -0.12
ERGIC3-207ENST00000438317 CENPQQ7L2Z9 268 aaPredicted RBP14.27□□□□□ -0.13
ERGIC3-207ENST00000438317 NUP188Q5SRE5 1749 aa14.27□□□□□ -0.13
ERGIC3-207ENST00000438317 DIAPH1O60610 1272 aaKnown RBP14.26□□□□□ -0.13
ERGIC3-207ENST00000438317 PRDM11Q9NQV5 511 aa14.26□□□□□ -0.13
ERGIC3-207ENST00000438317 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
ERGIC3-207ENST00000438317 CPSF1Q10570 1443 aaKnown RBP14.25□□□□□ -0.13
ERGIC3-207ENST00000438317 IL16Q14005 1332 aa14.25□□□□□ -0.13
ERGIC3-207ENST00000438317 NUDT16Q96DE0 195 aaKnown RBP14.25□□□□□ -0.13
ERGIC3-207ENST00000438317 ANP32EQ9BTT0 268 aa14.25□□□□□ -0.13
ERGIC3-207ENST00000438317 EDC4Q6P2E9 1401 aaKnown RBP14.24□□□□□ -0.13
ERGIC3-207ENST00000438317 FCHSD2O94868 740 aa14.24□□□□□ -0.13
ERGIC3-207ENST00000438317 NEUROD2Q15784 382 aa14.24□□□□□ -0.13
ERGIC3-207ENST00000438317 C20orf194Q5TEA3 1177 aa14.24□□□□□ -0.13
ERGIC3-207ENST00000438317 NBPF14Q5TI25 921 aa14.24□□□□□ -0.13
ERGIC3-207ENST00000438317 PLEKHF1Q96S99 279 aa14.24□□□□□ -0.13
ERGIC3-207ENST00000438317 COL3A1P02461 1466 aaPredicted RBP14.24□□□□□ -0.13
ERGIC3-207ENST00000438317 KIAA0232Q92628 1395 aa14.23□□□□□ -0.13
ERGIC3-207ENST00000438317 MAPK8IP3Q9UPT6 1336 aa14.23□□□□□ -0.13
ERGIC3-207ENST00000438317 U2SURPO15042 1029 aaKnown RBP14.23□□□□□ -0.13
ERGIC3-207ENST00000438317 KCNQ2O43526 872 aa14.23□□□□□ -0.13
ERGIC3-207ENST00000438317 NEFMP07197 916 aa14.23□□□□□ -0.13
ERGIC3-207ENST00000438317 CHRNA2Q15822 529 aa14.23□□□□□ -0.13
ERGIC3-207ENST00000438317 SPON1Q9HCB6 807 aa14.23□□□□□ -0.13
ERGIC3-207ENST00000438317 STRN4Q9NRL3 753 aa14.23□□□□□ -0.13
ERGIC3-207ENST00000438317 AKAP12Q02952 1782 aa14.22□□□□□ -0.13
ERGIC3-207ENST00000438317 BCAR3O75815 825 aa14.22□□□□□ -0.13
ERGIC3-207ENST00000438317 TMPOP42166 694 aaKnown RBP14.22□□□□□ -0.13
ERGIC3-207ENST00000438317 BARGINQ6ZT62 677 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms