RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 EIF5BO60841 1220 aaKnown RBP20.88■□□□□ 0.93
TTC3-209ENST00000438055 CD163L1Q9NR16 1453 aa20.88■□□□□ 0.93
TTC3-209ENST00000438055 USP32Q8NFA0 1604 aa20.88■□□□□ 0.93
TTC3-209ENST00000438055 MCM4P33991 863 aa20.88■□□□□ 0.93
TTC3-209ENST00000438055 SLC4A10Q6U841 1118 aa20.88■□□□□ 0.93
TTC3-209ENST00000438055 ANTXR1Q9H6X2 564 aa20.88■□□□□ 0.93
TTC3-209ENST00000438055 CFAP44Q96MT7 982 aa20.87■□□□□ 0.93
TTC3-209ENST00000438055 PNPLA6Q8IY17 1366 aa20.87■□□□□ 0.93
TTC3-209ENST00000438055 ALKQ9UM73 1620 aa20.86■□□□□ 0.93
TTC3-209ENST00000438055 L1TD1Q5T7N2 865 aaKnown RBP20.86■□□□□ 0.93
TTC3-209ENST00000438055 MIS18AQ9NYP9 233 aa20.86■□□□□ 0.93
TTC3-209ENST00000438055 COL3A1P02461 1466 aaPredicted RBP20.86■□□□□ 0.93
TTC3-209ENST00000438055 GOLGA6L3A6NEY3 463 aa20.85■□□□□ 0.93
TTC3-209ENST00000438055 SLC26A8Q96RN1 970 aa20.85■□□□□ 0.93
TTC3-209ENST00000438055 ANO8Q9HCE9 1232 aaPredicted RBP20.85■□□□□ 0.93
TTC3-209ENST00000438055 METP08581 1390 aa20.85■□□□□ 0.93
TTC3-209ENST00000438055 ARHGEF40Q8TER5 1519 aa20.84■□□□□ 0.93
TTC3-209ENST00000438055 RTF1Q92541 710 aaKnown RBP20.84■□□□□ 0.93
TTC3-209ENST00000438055 NLRP1Q9C000 1473 aa20.84■□□□□ 0.93
TTC3-209ENST00000438055 TRAK2O60296 914 aa20.83■□□□□ 0.92
TTC3-209ENST00000438055 PLEKHG5O94827 1062 aa20.83■□□□□ 0.92
TTC3-209ENST00000438055 BMP2KLQ5H9B9 411 aa20.83■□□□□ 0.92
TTC3-209ENST00000438055 C14orf37Q86TY3 774 aa20.83■□□□□ 0.92
TTC3-209ENST00000438055 ZMYM3Q14202 1370 aa20.83■□□□□ 0.92
TTC3-209ENST00000438055 ADGRB2O60241 1585 aa20.83■□□□□ 0.92
TTC3-209ENST00000438055 LRRC7Q96NW7 1537 aa20.82■□□□□ 0.92
TTC3-209ENST00000438055 ZNF692Q9BU19 519 aaPredicted RBP20.82■□□□□ 0.92
TTC3-209ENST00000438055 FAM135BQ49AJ0 1406 aa20.82■□□□□ 0.92
TTC3-209ENST00000438055 TBC1D9Q6ZT07 1266 aa20.82■□□□□ 0.92
TTC3-209ENST00000438055 ARHGAP45Q92619 1136 aa20.82■□□□□ 0.92
TTC3-209ENST00000438055 HSP90AB2PQ58FF8 381 aa20.82■□□□□ 0.92
TTC3-209ENST00000438055 MYO5BQ9ULV0 1848 aa20.81■□□□□ 0.92
TTC3-209ENST00000438055 NGDNQ8NEJ9 315 aaKnown RBP20.81■□□□□ 0.92
TTC3-209ENST00000438055 EIF4A2Q14240 407 aaKnown RBP20.8■□□□□ 0.92
TTC3-209ENST00000438055 RBM42Q9BTD8 480 aaKnown RBP20.8■□□□□ 0.92
TTC3-209ENST00000438055 EDC4Q6P2E9 1401 aaKnown RBP20.8■□□□□ 0.92
TTC3-209ENST00000438055 TMEM131LA2VDJ0 1609 aa20.8■□□□□ 0.92
TTC3-209ENST00000438055 NECTIN2Q92692 538 aa20.8■□□□□ 0.92
TTC3-209ENST00000438055 HAP1P54257 671 aaPredicted RBP20.79■□□□□ 0.92
TTC3-209ENST00000438055 PPP6R1Q9UPN7 881 aa20.79■□□□□ 0.92
TTC3-209ENST00000438055 MED14O60244 1454 aa20.79■□□□□ 0.92
TTC3-209ENST00000438055 CDC45O75419 566 aa20.79■□□□□ 0.92
TTC3-209ENST00000438055 AMPHP49418 695 aa20.79■□□□□ 0.92
TTC3-209ENST00000438055 SIRT2Q8IXJ6 389 aa20.78■□□□□ 0.92
TTC3-209ENST00000438055 PREX1Q8TCU6 1659 aa20.78■□□□□ 0.92
TTC3-209ENST00000438055 ACEP12821 1306 aa20.78■□□□□ 0.92
TTC3-209ENST00000438055 A2ML1A8K2U0 1454 aa20.78■□□□□ 0.92
TTC3-209ENST00000438055 SLC4A2P04920 1241 aa20.78■□□□□ 0.92
TTC3-209ENST00000438055 C16orf71Q8IYS4 520 aaPredicted RBP20.78■□□□□ 0.92
TTC3-209ENST00000438055 SMARCA5O60264 1052 aaPredicted RBP20.78■□□□□ 0.92
TTC3-209ENST00000438055 NUTM2GQ5VZR2 741 aa20.78■□□□□ 0.92
TTC3-209ENST00000438055 LTV1Q96GA3 475 aaPredicted RBP20.77■□□□□ 0.92
TTC3-209ENST00000438055 ZBTB7CA1YPR0 619 aa20.77■□□□□ 0.92
TTC3-209ENST00000438055 GBP4Q96PP9 640 aa20.77■□□□□ 0.91
TTC3-209ENST00000438055 DDX11L8A8MPP1 907 aa20.76■□□□□ 0.91
TTC3-209ENST00000438055 TSPYL4Q9UJ04 414 aa20.76■□□□□ 0.91
TTC3-209ENST00000438055 ATP7BP35670 1465 aa20.76■□□□□ 0.91
TTC3-209ENST00000438055 ZNF853P0CG23 659 aa20.76■□□□□ 0.91
TTC3-209ENST00000438055 TTC21BQ7Z4L5 1316 aa20.75■□□□□ 0.91
TTC3-209ENST00000438055 CEBPAP49715 358 aaPredicted RBP20.75■□□□□ 0.91
TTC3-209ENST00000438055 TSPOAP1O95153 1857 aa20.75■□□□□ 0.91
TTC3-209ENST00000438055 CASC1Q6TDU7 716 aa20.75■□□□□ 0.91
TTC3-209ENST00000438055 PRR36Q9H6K5 1346 aa20.75■□□□□ 0.91
TTC3-209ENST00000438055 FOXO3O43524 673 aa20.74■□□□□ 0.91
TTC3-209ENST00000438055 RBM25P49756 843 aaKnown RBP20.74■□□□□ 0.91
TTC3-209ENST00000438055 ABCC4O15439 1325 aa20.74■□□□□ 0.91
TTC3-209ENST00000438055 F6X3S4 739 aa20.73■□□□□ 0.91
TTC3-209ENST00000438055 NCLP19338 710 aaKnown RBP20.73■□□□□ 0.91
TTC3-209ENST00000438055 BRPF1P55201 1214 aaPredicted RBP20.72■□□□□ 0.91
TTC3-209ENST00000438055 OTUD7AQ8TE49 926 aaPredicted RBP20.72■□□□□ 0.91
TTC3-209ENST00000438055 TNPO1Q92973 898 aaKnown RBP20.72■□□□□ 0.91
TTC3-209ENST00000438055 EID1Q9Y6B2 187 aa20.72■□□□□ 0.91
TTC3-209ENST00000438055 MEIS3Q99687 375 aa20.72■□□□□ 0.91
TTC3-209ENST00000438055 RICTORQ6R327 1708 aa20.72■□□□□ 0.91
TTC3-209ENST00000438055 GOLGA6L22H0YM25 854 aa20.72■□□□□ 0.91
TTC3-209ENST00000438055 K7ELQ4 463 aaPredicted RBP20.71■□□□□ 0.91
TTC3-209ENST00000438055 STK31Q9BXU1 1019 aa20.71■□□□□ 0.91
TTC3-209ENST00000438055 CD2BP2O95400 341 aaKnown RBP20.7■□□□□ 0.9
TTC3-209ENST00000438055 PANK2Q9BZ23 570 aa20.7■□□□□ 0.9
TTC3-209ENST00000438055 PLEKHM2Q8IWE5 1019 aa20.7■□□□□ 0.9
TTC3-209ENST00000438055 HMMRO75330 724 aa20.69■□□□□ 0.9
TTC3-209ENST00000438055 TNRQ92752 1358 aa20.68■□□□□ 0.9
TTC3-209ENST00000438055 XRCC6P12956 609 aaKnown RBP eCLIP20.68■□□□□ 0.93e-6■■□□□ 14.4
TTC3-209ENST00000438055 NLRP6P59044 892 aa20.68■□□□□ 0.9
TTC3-209ENST00000438055 CPSF1Q10570 1443 aaKnown RBP20.68■□□□□ 0.9
TTC3-209ENST00000438055 SNX21Q969T3 373 aa20.68■□□□□ 0.9
TTC3-209ENST00000438055 DCTPP1Q9H773 170 aa20.68■□□□□ 0.9
TTC3-209ENST00000438055 AATKQ6ZMQ8 1374 aa20.68■□□□□ 0.9
TTC3-209ENST00000438055 GSPT1P15170 499 aaKnown RBP20.67■□□□□ 0.9
TTC3-209ENST00000438055 FKBP5Q13451 457 aaPredicted RBP20.67■□□□□ 0.9
TTC3-209ENST00000438055 INTS3Q68E01 1043 aaKnown RBP20.67■□□□□ 0.9
TTC3-209ENST00000438055 RPAP2Q8IXW5 612 aaPredicted RBP20.67■□□□□ 0.9
TTC3-209ENST00000438055 ROBO2Q9HCK4 1378 aa20.66■□□□□ 0.9
TTC3-209ENST00000438055 PTCH1Q13635 1447 aa20.66■□□□□ 0.9
TTC3-209ENST00000438055 CDK12Q9NYV4 1490 aaPredicted RBP20.66■□□□□ 0.9
TTC3-209ENST00000438055 ANKRD44Q8N8A2 993 aa20.66■□□□□ 0.9
TTC3-209ENST00000438055 CPS1P31327 1500 aa20.66■□□□□ 0.9
TTC3-209ENST00000438055 CHL1O00533 1208 aa20.66■□□□□ 0.9
TTC3-209ENST00000438055 TTC22Q5TAA0 569 aa20.66■□□□□ 0.9
TTC3-209ENST00000438055 VIRMAQ69YN4 1812 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms