RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 ADAMTS8Q9UP79 889 aa28.5■■■□□ 2.15
YBX1-203ENST00000436427 U2SURPO15042 1029 aaKnown RBP28.49■■■□□ 2.15
YBX1-203ENST00000436427 IP6K1Q92551 441 aa28.48■■■□□ 2.15
YBX1-203ENST00000436427 KIAA0232Q92628 1395 aa28.48■■■□□ 2.15
YBX1-203ENST00000436427 EIF4A2Q14240 407 aaKnown RBP28.47■■■□□ 2.15
YBX1-203ENST00000436427 U2AF1L5P0DN76 240 aaPredicted RBP28.46■■■□□ 2.15
YBX1-203ENST00000436427 IL13P35225 146 aa28.46■■■□□ 2.15
YBX1-203ENST00000436427 U2AF1Q01081 240 aaKnown RBP eCLIP28.46■■■□□ 2.15
YBX1-203ENST00000436427 CPDO75976 1380 aa28.45■■■□□ 2.15
YBX1-203ENST00000436427 LTV1Q96GA3 475 aaPredicted RBP28.43■■■□□ 2.14
YBX1-203ENST00000436427 HSPA1LP34931 641 aa28.43■■■□□ 2.14
YBX1-203ENST00000436427 CHRNA2Q15822 529 aa28.43■■■□□ 2.14
YBX1-203ENST00000436427 PRDM11Q9NQV5 511 aa28.43■■■□□ 2.14
YBX1-203ENST00000436427 JCADQ9P266 1359 aa28.41■■■□□ 2.14
YBX1-203ENST00000436427 BLMP54132 1417 aaPredicted RBP28.41■■■□□ 2.14
YBX1-203ENST00000436427 AXIN2Q9Y2T1 843 aa28.4■■■□□ 2.14
YBX1-203ENST00000436427 ABCC6O95255 1503 aa28.39■■■□□ 2.13
YBX1-203ENST00000436427 COL18A1P39060 1754 aa28.38■■■□□ 2.13
YBX1-203ENST00000436427 HNRNPUQ00839 825 aaKnown RBP eCLIP28.38■■■□□ 2.13
YBX1-203ENST00000436427 CCDC146Q8IYE0 955 aa28.38■■■□□ 2.13
YBX1-203ENST00000436427 RGPD5Q99666 1765 aa28.37■■■□□ 2.13
YBX1-203ENST00000436427 NUTM2BA6NNL0 878 aaPredicted RBP28.37■■■□□ 2.13
YBX1-203ENST00000436427 NUTM2EB1AL46 878 aaPredicted RBP28.37■■■□□ 2.13
YBX1-203ENST00000436427 NUTM2AQ8IVF1 878 aaPredicted RBP28.37■■■□□ 2.13
YBX1-203ENST00000436427 ANKRD24Q8TF21 1146 aa28.36■■■□□ 2.13
YBX1-203ENST00000436427 HMOX1P09601 288 aa28.35■■■□□ 2.13
YBX1-203ENST00000436427 RGPD1P0DJD0 1748 aa28.34■■■□□ 2.13
YBX1-203ENST00000436427 SENP3-EIF4A1A0A087X0R7 540 aa28.33■■■□□ 2.13
YBX1-203ENST00000436427 FAM83GA6ND36 823 aa28.33■■■□□ 2.13
YBX1-203ENST00000436427 ADAMTS2O95450 1211 aa28.33■■■□□ 2.13
YBX1-203ENST00000436427 EYA1Q99502 592 aa28.33■■■□□ 2.13
YBX1-203ENST00000436427 LMO7Q8WWI1 1683 aa28.32■■■□□ 2.12
YBX1-203ENST00000436427 ERBB3P21860 1342 aa28.32■■■□□ 2.12
YBX1-203ENST00000436427 FCHSD2O94868 740 aa28.31■■■□□ 2.12
YBX1-203ENST00000436427 SULT6B1Q6IMI4 303 aa28.31■■■□□ 2.12
YBX1-203ENST00000436427 IGSF1Q8N6C5 1336 aa28.3■■■□□ 2.12
YBX1-203ENST00000436427 RUNDC1Q96C34 613 aa28.3■■■□□ 2.12
YBX1-203ENST00000436427 RSPH6AQ9H0K4 717 aa28.3■■■□□ 2.12
YBX1-203ENST00000436427 PNNQ9H307 717 aaKnown RBP28.3■■■□□ 2.12
YBX1-203ENST00000436427 CSB-PGBD3P0DP91 1061 aa28.29■■■□□ 2.12
YBX1-203ENST00000436427 AEBP1Q8IUX7 1158 aa28.29■■■□□ 2.12
YBX1-203ENST00000436427 COL14A1Q05707 1796 aaKnown RBP28.29■■■□□ 2.12
YBX1-203ENST00000436427 CAMTA1Q9Y6Y1 1673 aa28.29■■■□□ 2.12
YBX1-203ENST00000436427 PRKAR2BP31323 418 aa28.28■■■□□ 2.12
YBX1-203ENST00000436427 SPATA31A6Q5VVP1 1343 aa28.28■■■□□ 2.12
YBX1-203ENST00000436427 MAPK8IP3Q9UPT6 1336 aa28.27■■■□□ 2.12
YBX1-203ENST00000436427 RGPD2P0DJD1 1756 aa28.27■■■□□ 2.12
YBX1-203ENST00000436427 NBPF6Q5VWK0 638 aa28.27■■■□□ 2.12
YBX1-203ENST00000436427 USHBP1Q8N6Y0 703 aa28.27■■■□□ 2.12
YBX1-203ENST00000436427 NBPF4Q96M43 638 aa28.27■■■□□ 2.12
YBX1-203ENST00000436427 PLEKHF1Q96S99 279 aa28.26■■■□□ 2.11
YBX1-203ENST00000436427 NEFMP07197 916 aa28.25■■■□□ 2.11
YBX1-203ENST00000436427 BTG4Q9NY30 223 aa28.25■■■□□ 2.11
YBX1-203ENST00000436427 COL5A2P05997 1499 aaPredicted RBP28.25■■■□□ 2.11
YBX1-203ENST00000436427 APAF1O14727 1248 aa28.24■■■□□ 2.11
YBX1-203ENST00000436427 NLRP2Q9NX02 1062 aa28.24■■■□□ 2.11
YBX1-203ENST00000436427 SALL2Q9Y467 1007 aaPredicted RBP28.24■■■□□ 2.11
YBX1-203ENST00000436427 FAM208AQ9UK61 1670 aaKnown RBP28.24■■■□□ 2.11
YBX1-203ENST00000436427 STRN4Q9NRL3 753 aa28.23■■■□□ 2.11
YBX1-203ENST00000436427 KDRP35968 1356 aa28.23■■■□□ 2.11
YBX1-203ENST00000436427 EVA1CP58658 441 aa28.23■■■□□ 2.11
YBX1-203ENST00000436427 TCP11L2Q8N4U5 519 aa28.22■■■□□ 2.11
YBX1-203ENST00000436427 WDR17Q8IZU2 1322 aa28.21■■■□□ 2.11
YBX1-203ENST00000436427 PLCH1Q4KWH8 1693 aa28.21■■■□□ 2.11
YBX1-203ENST00000436427 LRP6O75581 1613 aa28.19■■■□□ 2.1
YBX1-203ENST00000436427 TOM1L2Q6ZVM7 507 aa28.18■■■□□ 2.1
YBX1-203ENST00000436427 FBXO41Q8TF61 875 aa28.18■■■□□ 2.1
YBX1-203ENST00000436427 PHACTR3Q96KR7 559 aa28.18■■■□□ 2.1
YBX1-203ENST00000436427 ZBED9Q6R2W3 1325 aa28.18■■■□□ 2.1
YBX1-203ENST00000436427 NEUROD2Q15784 382 aa28.18■■■□□ 2.1
YBX1-203ENST00000436427 RRP7AQ9Y3A4 280 aaKnown RBP28.18■■■□□ 2.1
YBX1-203ENST00000436427 C8orf37Q96NL8 207 aa28.17■■■□□ 2.1
YBX1-203ENST00000436427 NCAPD2Q15021 1401 aa28.16■■■□□ 2.1
YBX1-203ENST00000436427 LARP1Q6PKG0 1096 aaKnown RBP28.16■■■□□ 2.1
YBX1-203ENST00000436427 MEX3CQ5U5Q3 659 aaKnown RBP28.15■■■□□ 2.1
YBX1-203ENST00000436427 NGLY1Q96IV0 654 aa28.13■■■□□ 2.09
YBX1-203ENST00000436427 TMPOP42166 694 aaKnown RBP28.13■■■□□ 2.09
YBX1-203ENST00000436427 CRB1P82279 1406 aa28.12■■■□□ 2.09
YBX1-203ENST00000436427 NWD2Q9ULI1 1742 aa28.12■■■□□ 2.09
YBX1-203ENST00000436427 SLIT2O94813 1529 aa28.11■■■□□ 2.09
YBX1-203ENST00000436427 NRAPQ86VF7 1730 aa28.11■■■□□ 2.09
YBX1-203ENST00000436427 CARD10Q9BWT7 1032 aa28.11■■■□□ 2.09
YBX1-203ENST00000436427 NFE2L2Q16236 605 aa28.1■■■□□ 2.09
YBX1-203ENST00000436427 NGEFQ8N5V2 710 aa28.1■■■□□ 2.09
YBX1-203ENST00000436427 RIPK4P57078 832 aa28.09■■■□□ 2.09
YBX1-203ENST00000436427 RAPGEF4Q8WZA2 1011 aa28.09■■■□□ 2.09
YBX1-203ENST00000436427 USP35Q9P2H5 1018 aa28.08■■■□□ 2.09
YBX1-203ENST00000436427 MTHFSDQ2M296 383 aaKnown RBP28.07■■■□□ 2.08
YBX1-203ENST00000436427 TATP17735 454 aaPredicted RBP28.06■■■□□ 2.08
YBX1-203ENST00000436427 GAS2L2Q8NHY3 880 aa28.05■■■□□ 2.08
YBX1-203ENST00000436427 MEGF6O75095 1541 aa28.04■■■□□ 2.08
YBX1-203ENST00000436427 UNC5CLQ8IV45 518 aa28.04■■■□□ 2.08
YBX1-203ENST00000436427 CCDC27Q2M243 656 aa28.03■■■□□ 2.08
YBX1-203ENST00000436427 NCBP3Q53F19 620 aaKnown RBP28.03■■■□□ 2.08
YBX1-203ENST00000436427 PLEKHO1Q53GL0 409 aaPredicted RBP28.03■■■□□ 2.08
YBX1-203ENST00000436427 WWC1Q8IX03 1113 aa28.03■■■□□ 2.08
YBX1-203ENST00000436427 FNBP4Q8N3X1 1017 aaPredicted RBP28.03■■■□□ 2.08
YBX1-203ENST00000436427 CCDC9Q9Y3X0 531 aaKnown RBP28.02■■■□□ 2.08
YBX1-203ENST00000436427 BCL9LQ86UU0 1499 aa28.02■■■□□ 2.08
YBX1-203ENST00000436427 AMOTQ4VCS5 1084 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms