RNA–Protein interactions for RNA: ENST00000433968.5

LMBR1-207, Transcript of limb development membrane protein 1, humanhuman

TSL 4

Gene LMBR1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-207ENST00000433968 CPSF1Q10570 1443 aaKnown RBP29.57■■■□□ 2.32
LMBR1-207ENST00000433968 PLSCR1O15162 318 aa29.57■■■□□ 2.32
LMBR1-207ENST00000433968 KCNH5Q8NCM2 988 aa29.57■■■□□ 2.32
LMBR1-207ENST00000433968 AKAP12Q02952 1782 aa29.57■■■□□ 2.32
LMBR1-207ENST00000433968 ROCK2O75116 1388 aaKnown RBP29.56■■■□□ 2.32
LMBR1-207ENST00000433968 RGPD3A6NKT7 1758 aaPredicted RBP29.55■■■□□ 2.32
LMBR1-207ENST00000433968 RGPD4Q7Z3J3 1758 aa29.55■■■□□ 2.32
LMBR1-207ENST00000433968 WNK3Q9BYP7 1800 aa29.55■■■□□ 2.32
LMBR1-207ENST00000433968 TTC21AQ8NDW8 1320 aa29.54■■■□□ 2.32
LMBR1-207ENST00000433968 CDCA7Q9BWT1 371 aaPredicted RBP29.54■■■□□ 2.32
LMBR1-207ENST00000433968 RGPD5Q99666 1765 aa29.54■■■□□ 2.32
LMBR1-207ENST00000433968 NEUROD1Q13562 356 aa29.53■■■□□ 2.32
LMBR1-207ENST00000433968 MARCH10Q8NA82 808 aaPredicted RBP29.53■■■□□ 2.32
LMBR1-207ENST00000433968 BCL11BQ9C0K0 894 aaPredicted RBP29.53■■■□□ 2.32
LMBR1-207ENST00000433968 SPON1Q9HCB6 807 aa29.53■■■□□ 2.32
LMBR1-207ENST00000433968 SOX12O15370 315 aa29.52■■■□□ 2.32
LMBR1-207ENST00000433968 PTF1AQ7RTS3 328 aa29.52■■■□□ 2.32
LMBR1-207ENST00000433968 KCNQ2O43526 872 aa29.51■■■□□ 2.31
LMBR1-207ENST00000433968 CARD10Q9BWT7 1032 aa29.51■■■□□ 2.31
LMBR1-207ENST00000433968 KTN1Q86UP2 1357 aaKnown RBP29.5■■■□□ 2.31
LMBR1-207ENST00000433968 BCL9O00512 1426 aa29.49■■■□□ 2.31
LMBR1-207ENST00000433968 CSB-PGBD3P0DP91 1061 aa29.49■■■□□ 2.31
LMBR1-207ENST00000433968 NFAT5O94916 1531 aa29.47■■■□□ 2.31
LMBR1-207ENST00000433968 PPP1R1BQ9UD71 204 aaPredicted RBP29.47■■■□□ 2.31
LMBR1-207ENST00000433968 PROM2Q8N271 834 aa29.45■■■□□ 2.31
LMBR1-207ENST00000433968 ANO8Q9HCE9 1232 aaPredicted RBP29.45■■■□□ 2.31
LMBR1-207ENST00000433968 MON2Q7Z3U7 1717 aa29.43■■■□□ 2.3
LMBR1-207ENST00000433968 EXOC5O00471 708 aa29.43■■■□□ 2.3
LMBR1-207ENST00000433968 CCDC7Q96M83 1385 aa29.42■■■□□ 2.3
LMBR1-207ENST00000433968 ABCC6O95255 1503 aa29.41■■■□□ 2.3
LMBR1-207ENST00000433968 SBNO2Q9Y2G9 1366 aa29.4■■■□□ 2.3
LMBR1-207ENST00000433968 CASZ1Q86V15 1759 aa29.4■■■□□ 2.3
LMBR1-207ENST00000433968 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.4■■■□□ 2.32e-6■■□□□ 12.3
LMBR1-207ENST00000433968 USP31Q70CQ4 1352 aa29.39■■■□□ 2.3
LMBR1-207ENST00000433968 NINLQ9Y2I6 1382 aa29.39■■■□□ 2.3
LMBR1-207ENST00000433968 TXNRD1Q16881 649 aa29.37■■■□□ 2.29
LMBR1-207ENST00000433968 PDGFDQ9GZP0 370 aaPredicted RBP29.37■■■□□ 2.29
LMBR1-207ENST00000433968 YY1P25490 414 aa29.36■■■□□ 2.29
LMBR1-207ENST00000433968 USP54Q70EL1 1684 aa29.36■■■□□ 2.29
LMBR1-207ENST00000433968 CD163L1Q9NR16 1453 aa29.36■■■□□ 2.29
LMBR1-207ENST00000433968 NME9Q86XW9 330 aa29.35■■■□□ 2.29
LMBR1-207ENST00000433968 TNS2Q63HR2 1409 aa29.35■■■□□ 2.29
LMBR1-207ENST00000433968 CARD11Q9BXL7 1154 aa29.34■■■□□ 2.29
LMBR1-207ENST00000433968 DCAF8L1A6NGE4 600 aa29.33■■■□□ 2.29
LMBR1-207ENST00000433968 TMC1Q8TDI8 760 aa29.33■■■□□ 2.29
LMBR1-207ENST00000433968 ERBB3P21860 1342 aa29.33■■■□□ 2.29
LMBR1-207ENST00000433968 NLRP2Q9NX02 1062 aa29.32■■■□□ 2.28
LMBR1-207ENST00000433968 STK32BQ9NY57 414 aa29.32■■■□□ 2.28
LMBR1-207ENST00000433968 ZBTB7AO95365 584 aa29.31■■■□□ 2.28
LMBR1-207ENST00000433968 LTN1O94822 1766 aa29.31■■■□□ 2.28
LMBR1-207ENST00000433968 SLC15A2Q16348 729 aa29.3■■■□□ 2.28
LMBR1-207ENST00000433968 HDGFL2Q7Z4V5 671 aaPredicted RBP29.3■■■□□ 2.28
LMBR1-207ENST00000433968 SLC12A5Q9H2X9 1139 aa29.3■■■□□ 2.28
LMBR1-207ENST00000433968 NHSQ6T4R5 1651 aa29.28■■■□□ 2.28
LMBR1-207ENST00000433968 IL2RBP14784 551 aa29.27■■■□□ 2.28
LMBR1-207ENST00000433968 PTGER2P43116 358 aa29.27■■■□□ 2.28
LMBR1-207ENST00000433968 ACSBG1Q96GR2 724 aa29.27■■■□□ 2.28
LMBR1-207ENST00000433968 ANKRD24Q8TF21 1146 aa29.26■■■□□ 2.27
LMBR1-207ENST00000433968 ATF5Q9Y2D1 282 aaPredicted RBP29.26■■■□□ 2.27
LMBR1-207ENST00000433968 EDC4Q6P2E9 1401 aaKnown RBP29.26■■■□□ 2.27
LMBR1-207ENST00000433968 TERF2IPQ9NYB0 399 aa29.24■■■□□ 2.27
LMBR1-207ENST00000433968 MYOM1P52179 1685 aa29.24■■■□□ 2.27
LMBR1-207ENST00000433968 PUS7Q96PZ0 661 aaKnown RBP29.22■■■□□ 2.27
LMBR1-207ENST00000433968 A0A1W2PP64 1363 aa29.22■■■□□ 2.27
LMBR1-207ENST00000433968 MTFR1LQ9H019 292 aa29.19■■■□□ 2.26
LMBR1-207ENST00000433968 BTAF1O14981 1849 aa29.19■■■□□ 2.26
LMBR1-207ENST00000433968 KAT6BQ8WYB5 2073 aa29.19■■■□□ 2.26
LMBR1-207ENST00000433968 TONSLQ96HA7 1378 aa29.17■■■□□ 2.26
LMBR1-207ENST00000433968 IP6K1Q92551 441 aa29.17■■■□□ 2.26
LMBR1-207ENST00000433968 SGIP1Q9BQI5 828 aa29.16■■■□□ 2.26
LMBR1-207ENST00000433968 PAPPAQ13219 1627 aa29.16■■■□□ 2.26
LMBR1-207ENST00000433968 SYT17Q9BSW7 474 aa29.15■■■□□ 2.26
LMBR1-207ENST00000433968 FHDC1Q9C0D6 1143 aaPredicted RBP29.15■■■□□ 2.26
LMBR1-207ENST00000433968 DDX54Q8TDD1 881 aaKnown RBP29.11■■■□□ 2.25
LMBR1-207ENST00000433968 LTV1Q96GA3 475 aaPredicted RBP29.11■■■□□ 2.25
LMBR1-207ENST00000433968 TESK2Q96S53 571 aa29.11■■■□□ 2.25
LMBR1-207ENST00000433968 LRRC4BQ9NT99 713 aa29.11■■■□□ 2.25
LMBR1-207ENST00000433968 FAM208AQ9UK61 1670 aaKnown RBP29.11■■■□□ 2.25
LMBR1-207ENST00000433968 ZNF827Q17R98 1081 aa29.09■■■□□ 2.25
LMBR1-207ENST00000433968 ST20-MTHFSA0A0A6YYL1 179 aa29.08■■■□□ 2.25
LMBR1-207ENST00000433968 COG3Q96JB2 828 aa29.08■■■□□ 2.25
LMBR1-207ENST00000433968 MAP3K19Q56UN5 1328 aa29.07■■■□□ 2.24
LMBR1-207ENST00000433968 ARXQ96QS3 562 aa29.07■■■□□ 2.24
LMBR1-207ENST00000433968 HOXC9P31274 260 aa29.05■■■□□ 2.24
LMBR1-207ENST00000433968 SLC24A1O60721 1099 aa29.04■■■□□ 2.24
LMBR1-207ENST00000433968 FBLN1P23142 703 aa29.04■■■□□ 2.24
LMBR1-207ENST00000433968 SLC27A3Q5K4L6 730 aa29.04■■■□□ 2.24
LMBR1-207ENST00000433968 AKT1S1Q96B36 256 aa29.04■■■□□ 2.24
LMBR1-207ENST00000433968 AMPHP49418 695 aa29.03■■■□□ 2.24
LMBR1-207ENST00000433968 RGPD2P0DJD1 1756 aa29.01■■■□□ 2.23
LMBR1-207ENST00000433968 MAP3K5Q99683 1374 aa29.01■■■□□ 2.23
LMBR1-207ENST00000433968 PRIM1P49642 420 aaKnown RBP29■■■□□ 2.23
LMBR1-207ENST00000433968 SYTL4Q96C24 671 aaPredicted RBP29■■■□□ 2.23
LMBR1-207ENST00000433968 ANKRD36BQ8N2N9 1353 aa29■■■□□ 2.23
LMBR1-207ENST00000433968 SLC16A10Q8TF71 515 aa28.99■■■□□ 2.23
LMBR1-207ENST00000433968 QSER1Q2KHR3 1735 aa28.99■■■□□ 2.23
LMBR1-207ENST00000433968 ZNF784Q8NCA9 323 aaPredicted RBP28.98■■■□□ 2.23
LMBR1-207ENST00000433968 ZCRB1Q8TBF4 217 aaKnown RBP28.98■■■□□ 2.23
LMBR1-207ENST00000433968 DOT1LQ8TEK3 1739 aa28.97■■■□□ 2.23
LMBR1-207ENST00000433968 SHANK3Q9BYB0 1731 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms