RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 THUMPD2Q9BTF0 503 aaKnown RBP21.75■■□□□ 1.07
CTSD-204ENST00000433655 NOB1Q9ULX3 412 aaKnown RBP21.75■■□□□ 1.07
CTSD-204ENST00000433655 SSH2Q76I76 1423 aa21.75■■□□□ 1.07
CTSD-204ENST00000433655 PTCH1Q13635 1447 aa21.75■■□□□ 1.07
CTSD-204ENST00000433655 NEFMP07197 916 aa21.74■■□□□ 1.07
CTSD-204ENST00000433655 DIP2AQ14689 1571 aa21.74■■□□□ 1.07
CTSD-204ENST00000433655 RGPD1P0DJD0 1748 aa21.74■■□□□ 1.07
CTSD-204ENST00000433655 XRN1Q8IZH2 1706 aaKnown RBP21.74■■□□□ 1.07
CTSD-204ENST00000433655 RGPD8O14715 1765 aaPredicted RBP21.74■■□□□ 1.07
CTSD-204ENST00000433655 DDRGK1Q96HY6 314 aa21.73■■□□□ 1.07
CTSD-204ENST00000433655 ALDH1L2Q3SY69 923 aa21.73■■□□□ 1.07
CTSD-204ENST00000433655 EID1Q9Y6B2 187 aa21.73■■□□□ 1.07
CTSD-204ENST00000433655 ZNF853P0CG23 659 aa21.72■■□□□ 1.07
CTSD-204ENST00000433655 NBR1Q14596 966 aa21.72■■□□□ 1.07
CTSD-204ENST00000433655 NUTM2FA1L443 756 aa21.72■■□□□ 1.07
CTSD-204ENST00000433655 RWDD1Q9H446 243 aaPredicted RBP21.72■■□□□ 1.07
CTSD-204ENST00000433655 PDZRN3Q9UPQ7 1066 aa21.72■■□□□ 1.07
CTSD-204ENST00000433655 RIMS1Q86UR5 1692 aaKnown RBP21.72■■□□□ 1.07
CTSD-204ENST00000433655 KIF16BQ96L93 1317 aa21.71■■□□□ 1.07
CTSD-204ENST00000433655 AMOTL2Q9Y2J4 779 aa21.71■■□□□ 1.07
CTSD-204ENST00000433655 TMEM57Q8N5G2 664 aa21.7■■□□□ 1.06
CTSD-204ENST00000433655 TBX22Q9Y458 520 aa21.7■■□□□ 1.06
CTSD-204ENST00000433655 USP31Q70CQ4 1352 aa21.7■■□□□ 1.06
CTSD-204ENST00000433655 BRPF1P55201 1214 aaPredicted RBP21.7■■□□□ 1.06
CTSD-204ENST00000433655 IFT57Q9NWB7 429 aa21.7■■□□□ 1.06
CTSD-204ENST00000433655 DDX19BQ9UMR2 479 aa21.7■■□□□ 1.06
CTSD-204ENST00000433655 LAS1LQ9Y4W2 734 aaKnown RBP21.7■■□□□ 1.06
CTSD-204ENST00000433655 FMN2Q9NZ56 1722 aa21.69■■□□□ 1.06
CTSD-204ENST00000433655 USP19O94966 1318 aa21.69■■□□□ 1.06
CTSD-204ENST00000433655 EIF4A2Q14240 407 aaKnown RBP21.68■■□□□ 1.06
CTSD-204ENST00000433655 ITPRIPQ8IWB1 547 aa21.68■■□□□ 1.06
CTSD-204ENST00000433655 VAMP4O75379 141 aa21.68■■□□□ 1.06
CTSD-204ENST00000433655 TRHP20396 242 aaPredicted RBP21.68■■□□□ 1.06
CTSD-204ENST00000433655 CALD1Q05682 793 aaKnown RBP21.68■■□□□ 1.06
CTSD-204ENST00000433655 ZNF428Q96B54 188 aa21.68■■□□□ 1.06
CTSD-204ENST00000433655 TSPYL6Q8N831 410 aa21.67■■□□□ 1.06
CTSD-204ENST00000433655 MBIPQ9NS73 344 aa21.67■■□□□ 1.06
CTSD-204ENST00000433655 GNAI1P63096 354 aa21.67■■□□□ 1.06
CTSD-204ENST00000433655 PLPPR3Q6T4P5 718 aa21.67■■□□□ 1.06
CTSD-204ENST00000433655 HDAC1Q13547 482 aaPredicted RBP21.66■■□□□ 1.06
CTSD-204ENST00000433655 AEBP1Q8IUX7 1158 aa21.66■■□□□ 1.06
CTSD-204ENST00000433655 ZBTB40Q9NUA8 1239 aa21.66■■□□□ 1.06
CTSD-204ENST00000433655 IPO8O15397 1037 aaKnown RBP21.65■■□□□ 1.06
CTSD-204ENST00000433655 SEC24BO95487 1268 aa21.65■■□□□ 1.06
CTSD-204ENST00000433655 PIK3C2AO00443 1686 aa21.65■■□□□ 1.06
CTSD-204ENST00000433655 FAM83GA6ND36 823 aa21.65■■□□□ 1.06
CTSD-204ENST00000433655 MRPL50Q8N5N7 158 aaKnown RBP21.65■■□□□ 1.06
CTSD-204ENST00000433655 LMOD3Q0VAK6 560 aa21.64■■□□□ 1.05
CTSD-204ENST00000433655 THEMISQ8N1K5 641 aaPredicted RBP21.63■■□□□ 1.05
CTSD-204ENST00000433655 CFAP44Q96MT7 982 aa21.63■■□□□ 1.05
CTSD-204ENST00000433655 PIK3R4Q99570 1358 aa21.63■■□□□ 1.05
CTSD-204ENST00000433655 CEP170BQ9Y4F5 1589 aaPredicted RBP21.63■■□□□ 1.05
CTSD-204ENST00000433655 MARF1Q9Y4F3 1742 aaKnown RBP21.63■■□□□ 1.05
CTSD-204ENST00000433655 HSP90AB2PQ58FF8 381 aa21.62■■□□□ 1.05
CTSD-204ENST00000433655 SULT6B1Q6IMI4 303 aa21.62■■□□□ 1.05
CTSD-204ENST00000433655 TTC21AQ8NDW8 1320 aa21.61■■□□□ 1.05
CTSD-204ENST00000433655 SLC4A3P48751 1232 aa21.61■■□□□ 1.05
CTSD-204ENST00000433655 DCTN1Q14203 1278 aa21.61■■□□□ 1.05
CTSD-204ENST00000433655 SMC5Q8IY18 1101 aa21.6■■□□□ 1.05
CTSD-204ENST00000433655 C8orf58Q8NAV2 365 aa21.6■■□□□ 1.05
CTSD-204ENST00000433655 ARHGAP45Q92619 1136 aa21.59■■□□□ 1.05
CTSD-204ENST00000433655 TWISTNBQ3B726 338 aaPredicted RBP21.58■■□□□ 1.05
CTSD-204ENST00000433655 USP54Q70EL1 1684 aa21.58■■□□□ 1.05
CTSD-204ENST00000433655 ELL2O00472 640 aaPredicted RBP21.57■■□□□ 1.04
CTSD-204ENST00000433655 ANKARQ7Z5J8 1434 aa21.57■■□□□ 1.04
CTSD-204ENST00000433655 MAP3K19Q56UN5 1328 aa21.57■■□□□ 1.04
CTSD-204ENST00000433655 ABCC4O15439 1325 aa21.56■■□□□ 1.04
CTSD-204ENST00000433655 ARHGEF10O15013 1369 aa21.56■■□□□ 1.04
CTSD-204ENST00000433655 KCNA6P17658 529 aa21.55■■□□□ 1.04
CTSD-204ENST00000433655 ZBTB7BO15156 539 aaPredicted RBP21.55■■□□□ 1.04
CTSD-204ENST00000433655 SBNO1A3KN83 1393 aa21.54■■□□□ 1.04
CTSD-204ENST00000433655 SOX12O15370 315 aa21.54■■□□□ 1.04
CTSD-204ENST00000433655 FLT4P35916 1363 aa21.53■■□□□ 1.04
CTSD-204ENST00000433655 CHD2O14647 1828 aaKnown RBP21.53■■□□□ 1.04
CTSD-204ENST00000433655 NGDNQ8NEJ9 315 aaKnown RBP21.53■■□□□ 1.04
CTSD-204ENST00000433655 ZNF142P52746 1687 aaPredicted RBP21.52■■□□□ 1.04
CTSD-204ENST00000433655 DEKP35659 375 aaKnown RBP21.51■■□□□ 1.03
CTSD-204ENST00000433655 KDRP35968 1356 aa21.51■■□□□ 1.03
CTSD-204ENST00000433655 CRB1P82279 1406 aa21.51■■□□□ 1.03
CTSD-204ENST00000433655 CHL1O00533 1208 aa21.51■■□□□ 1.03
CTSD-204ENST00000433655 RTL5Q5HYW3 569 aaPredicted RBP21.51■■□□□ 1.03
CTSD-204ENST00000433655 MCM10Q7L590 875 aa21.51■■□□□ 1.03
CTSD-204ENST00000433655 NUCB1Q02818 461 aa21.49■■□□□ 1.03
CTSD-204ENST00000433655 KRT24Q2M2I5 525 aa21.49■■□□□ 1.03
CTSD-204ENST00000433655 RGS12O14924 1447 aa21.48■■□□□ 1.03
CTSD-204ENST00000433655 NWD1Q149M9 1564 aa21.48■■□□□ 1.03
CTSD-204ENST00000433655 TBC1D32Q96NH3 1257 aa21.48■■□□□ 1.03
CTSD-204ENST00000433655 DAXXQ9UER7 740 aaPredicted RBP21.48■■□□□ 1.03
CTSD-204ENST00000433655 KIAA0232Q92628 1395 aa21.47■■□□□ 1.03
CTSD-204ENST00000433655 IGSF1Q8N6C5 1336 aa21.47■■□□□ 1.03
CTSD-204ENST00000433655 C1orf115Q9H7X2 142 aa21.47■■□□□ 1.03
CTSD-204ENST00000433655 LRRC37A3O60309 1634 aa21.47■■□□□ 1.03
CTSD-204ENST00000433655 USP35Q9P2H5 1018 aa21.46■■□□□ 1.03
CTSD-204ENST00000433655 API5Q9BZZ5 524 aaKnown RBP21.46■■□□□ 1.03
CTSD-204ENST00000433655 FOXO3O43524 673 aa21.45■■□□□ 1.02
CTSD-204ENST00000433655 MTHFSDQ2M296 383 aaKnown RBP21.45■■□□□ 1.02
CTSD-204ENST00000433655 SIRT2Q8IXJ6 389 aa21.45■■□□□ 1.02
CTSD-204ENST00000433655 EYA1Q99502 592 aa21.45■■□□□ 1.02
CTSD-204ENST00000433655 CHMP4BQ9H444 224 aaKnown RBP21.45■■□□□ 1.02
CTSD-204ENST00000433655 KIF24Q5T7B8 1368 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms