RNA–Protein interactions for RNA: ENST00000433627.9

LSM14A-201, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LSM14A, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-201ENST00000433627 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.52■□□□□ 0.39
LSM14A-201ENST00000433627 KNDC1Q76NI1 1749 aa17.51■□□□□ 0.39
LSM14A-201ENST00000433627 PLEKHG5O94827 1062 aa17.51■□□□□ 0.39
LSM14A-201ENST00000433627 EIF4A2Q14240 407 aaKnown RBP17.51■□□□□ 0.39
LSM14A-201ENST00000433627 C3P01024 1663 aa17.51■□□□□ 0.39
LSM14A-201ENST00000433627 KCNA6P17658 529 aa17.51■□□□□ 0.39
LSM14A-201ENST00000433627 AATKQ6ZMQ8 1374 aa17.5■□□□□ 0.39
LSM14A-201ENST00000433627 C8orf34Q49A92 452 aa17.5■□□□□ 0.39
LSM14A-201ENST00000433627 CDK12Q9NYV4 1490 aaPredicted RBP17.5■□□□□ 0.39
LSM14A-201ENST00000433627 TMEM57Q8N5G2 664 aa17.5■□□□□ 0.39
LSM14A-201ENST00000433627 TSPYL6Q8N831 410 aa17.5■□□□□ 0.39
LSM14A-201ENST00000433627 RWDD1Q9H446 243 aaPredicted RBP17.5■□□□□ 0.39
LSM14A-201ENST00000433627 ITSN1Q15811 1721 aa17.5■□□□□ 0.39
LSM14A-201ENST00000433627 PLEKHG3A1L390 1219 aa17.5■□□□□ 0.39
LSM14A-201ENST00000433627 FER1L4A9Z1Z3 1794 aa17.49■□□□□ 0.39
LSM14A-201ENST00000433627 SLC4A3P48751 1232 aa17.49■□□□□ 0.39
LSM14A-201ENST00000433627 GNAI1P63096 354 aa17.49■□□□□ 0.39
LSM14A-201ENST00000433627 CALD1Q05682 793 aaKnown RBP17.49■□□□□ 0.39
LSM14A-201ENST00000433627 PDZRN3Q9UPQ7 1066 aa17.49■□□□□ 0.39
LSM14A-201ENST00000433627 IPO8O15397 1037 aaKnown RBP17.48■□□□□ 0.39
LSM14A-201ENST00000433627 MBIPQ9NS73 344 aa17.48■□□□□ 0.39
LSM14A-201ENST00000433627 USP6P35125 1406 aa17.48■□□□□ 0.39
LSM14A-201ENST00000433627 DAXXQ9UER7 740 aaPredicted RBP17.47■□□□□ 0.39
LSM14A-201ENST00000433627 KIF16BQ96L93 1317 aa17.47■□□□□ 0.39
LSM14A-201ENST00000433627 AMPHP49418 695 aa17.47■□□□□ 0.39
LSM14A-201ENST00000433627 MON2Q7Z3U7 1717 aa17.47■□□□□ 0.39
LSM14A-201ENST00000433627 BCL11AQ9H165 835 aa17.47■□□□□ 0.39
LSM14A-201ENST00000433627 DDX19BQ9UMR2 479 aa17.47■□□□□ 0.39
LSM14A-201ENST00000433627 LMOD3Q0VAK6 560 aa17.46■□□□□ 0.39
LSM14A-201ENST00000433627 NLRP6P59044 892 aa17.46■□□□□ 0.39
LSM14A-201ENST00000433627 MCM10Q7L590 875 aa17.46■□□□□ 0.38
LSM14A-201ENST00000433627 IFT57Q9NWB7 429 aa17.45■□□□□ 0.38
LSM14A-201ENST00000433627 ZBTB7CA1YPR0 619 aa17.44■□□□□ 0.38
LSM14A-201ENST00000433627 TWISTNBQ3B726 338 aaPredicted RBP17.44■□□□□ 0.38
LSM14A-201ENST00000433627 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
LSM14A-201ENST00000433627 MAP3K19Q56UN5 1328 aa17.44■□□□□ 0.38
LSM14A-201ENST00000433627 AKAP12Q02952 1782 aa17.44■□□□□ 0.38
LSM14A-201ENST00000433627 C8orf58Q8NAV2 365 aa17.44■□□□□ 0.38
LSM14A-201ENST00000433627 VAMP4O75379 141 aa17.43■□□□□ 0.38
LSM14A-201ENST00000433627 AAMPQ13685 434 aa17.43■□□□□ 0.38
LSM14A-201ENST00000433627 DDRGK1Q96HY6 314 aa17.43■□□□□ 0.38
LSM14A-201ENST00000433627 KRT24Q2M2I5 525 aa17.42■□□□□ 0.38
LSM14A-201ENST00000433627 ALDH1L2Q3SY69 923 aa17.42■□□□□ 0.38
LSM14A-201ENST00000433627 C1orf115Q9H7X2 142 aa17.42■□□□□ 0.38
LSM14A-201ENST00000433627 ARHGAP23Q9P227 1491 aa17.42■□□□□ 0.38
LSM14A-201ENST00000433627 SLIT1O75093 1534 aa17.42■□□□□ 0.38
LSM14A-201ENST00000433627 CFAP44Q96MT7 982 aa17.41■□□□□ 0.38
LSM14A-201ENST00000433627 OVOS2A0A0J9YW53 1432 aa17.41■□□□□ 0.38
LSM14A-201ENST00000433627 OVOS2Q6IE36 1432 aa17.41■□□□□ 0.38
LSM14A-201ENST00000433627 ANKLE2Q86XL3 938 aa17.4■□□□□ 0.38
LSM14A-201ENST00000433627 ABTB2Q8N961 1025 aa17.4■□□□□ 0.38
LSM14A-201ENST00000433627 FOXO3O43524 673 aa17.4■□□□□ 0.38
LSM14A-201ENST00000433627 MIS18AQ9NYP9 233 aa17.4■□□□□ 0.38
LSM14A-201ENST00000433627 MRPL50Q8N5N7 158 aaKnown RBP17.39■□□□□ 0.37
LSM14A-201ENST00000433627 TTC21AQ8NDW8 1320 aa17.39■□□□□ 0.37
LSM14A-201ENST00000433627 SEC24BO95487 1268 aa17.39■□□□□ 0.37
LSM14A-201ENST00000433627 DIP2AQ14689 1571 aa17.39■□□□□ 0.37
LSM14A-201ENST00000433627 RTL5Q5HYW3 569 aaPredicted RBP17.38■□□□□ 0.37
LSM14A-201ENST00000433627 PTCH1Q13635 1447 aa17.38■□□□□ 0.37
LSM14A-201ENST00000433627 ZNF853P0CG23 659 aa17.38■□□□□ 0.37
LSM14A-201ENST00000433627 RTF1Q92541 710 aaKnown RBP17.37■□□□□ 0.37
LSM14A-201ENST00000433627 ZBTB40Q9NUA8 1239 aa17.37■□□□□ 0.37
LSM14A-201ENST00000433627 RGPD8O14715 1765 aaPredicted RBP17.37■□□□□ 0.37
LSM14A-201ENST00000433627 ZNF428Q96B54 188 aa17.35■□□□□ 0.37
LSM14A-201ENST00000433627 EYA1Q99502 592 aa17.35■□□□□ 0.37
LSM14A-201ENST00000433627 RIMS1Q86UR5 1692 aaKnown RBP17.35■□□□□ 0.37
LSM14A-201ENST00000433627 TOPAZ1Q8N9V7 1692 aa17.35■□□□□ 0.37
LSM14A-201ENST00000433627 ESCO1Q5FWF5 840 aa17.35■□□□□ 0.37
LSM14A-201ENST00000433627 LMOD2Q6P5Q4 547 aa17.35■□□□□ 0.37
LSM14A-201ENST00000433627 FLT4P35916 1363 aa17.35■□□□□ 0.37
LSM14A-201ENST00000433627 MTHFSDQ2M296 383 aaKnown RBP17.34■□□□□ 0.37
LSM14A-201ENST00000433627 LNPKQ9C0E8 428 aa17.34■□□□□ 0.37
LSM14A-201ENST00000433627 DLG5Q8TDM6 1919 aa17.34■□□□□ 0.37
LSM14A-201ENST00000433627 CEP170BQ9Y4F5 1589 aaPredicted RBP17.34■□□□□ 0.37
LSM14A-201ENST00000433627 USP31Q70CQ4 1352 aa17.34■□□□□ 0.37
LSM14A-201ENST00000433627 XPCQ01831 940 aaPredicted RBP17.34■□□□□ 0.37
LSM14A-201ENST00000433627 PHF8Q9UPP1 1060 aa17.34■□□□□ 0.37
LSM14A-201ENST00000433627 NRKQ7Z2Y5 1582 aa17.33■□□□□ 0.37
LSM14A-201ENST00000433627 USHBP1Q8N6Y0 703 aa17.33■□□□□ 0.37
LSM14A-201ENST00000433627 HDAC1Q13547 482 aaPredicted RBP17.33■□□□□ 0.36
LSM14A-201ENST00000433627 SSH2Q76I76 1423 aa17.33■□□□□ 0.36
LSM14A-201ENST00000433627 SBNO1A3KN83 1393 aa17.33■□□□□ 0.36
LSM14A-201ENST00000433627 PEAK1Q9H792 1746 aa17.32■□□□□ 0.36
LSM14A-201ENST00000433627 UPF2Q9HAU5 1272 aaKnown RBP17.32■□□□□ 0.36
LSM14A-201ENST00000433627 PSME1Q06323 249 aa17.31■□□□□ 0.36
LSM14A-201ENST00000433627 TSPYL4Q9UJ04 414 aa17.31■□□□□ 0.36
LSM14A-201ENST00000433627 API5Q9BZZ5 524 aaKnown RBP17.3■□□□□ 0.36
LSM14A-201ENST00000433627 ZBTB7BO15156 539 aaPredicted RBP17.3■□□□□ 0.36
LSM14A-201ENST00000433627 HOXC9P31274 260 aa17.3■□□□□ 0.36
LSM14A-201ENST00000433627 ANKRD45Q5TZF3 282 aa17.3■□□□□ 0.36
LSM14A-201ENST00000433627 NECTIN2Q92692 538 aa17.29■□□□□ 0.36
LSM14A-201ENST00000433627 CHL1O00533 1208 aa17.29■□□□□ 0.36
LSM14A-201ENST00000433627 MFAP1P55081 439 aaKnown RBP17.28■□□□□ 0.36
LSM14A-201ENST00000433627 ARHGAP45Q92619 1136 aa17.28■□□□□ 0.36
LSM14A-201ENST00000433627 ARHGEF10O15013 1369 aa17.28■□□□□ 0.36
LSM14A-201ENST00000433627 SMC5Q8IY18 1101 aa17.28■□□□□ 0.36
LSM14A-201ENST00000433627 BRPF1P55201 1214 aaPredicted RBP17.27■□□□□ 0.36
LSM14A-201ENST00000433627 SLC4A2P04920 1241 aa17.27■□□□□ 0.35
LSM14A-201ENST00000433627 SLC4A10Q6U841 1118 aa17.27■□□□□ 0.35
LSM14A-201ENST00000433627 GAS2L2Q8NHY3 880 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms