RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 ABCA3Q99758 1704 aa35.31■■■■□ 3.24
TMEM248-205ENST00000433271 ZBTB7CA1YPR0 619 aa35.31■■■■□ 3.24
TMEM248-205ENST00000433271 EIF4A2Q14240 407 aaKnown RBP35.29■■■■□ 3.24
TMEM248-205ENST00000433271 KIAA0232Q92628 1395 aa35.29■■■■□ 3.24
TMEM248-205ENST00000433271 U2SURPO15042 1029 aaKnown RBP35.27■■■■□ 3.24
TMEM248-205ENST00000433271 U2AF1L5P0DN76 240 aaPredicted RBP35.26■■■■□ 3.24
TMEM248-205ENST00000433271 U2AF1Q01081 240 aaKnown RBP eCLIP35.26■■■■□ 3.246e-7■□□□□ 8.1
TMEM248-205ENST00000433271 BLMP54132 1417 aaPredicted RBP35.25■■■■□ 3.23
TMEM248-205ENST00000433271 YTHDC1Q96MU7 727 aaKnown RBP35.24■■■■□ 3.23
TMEM248-205ENST00000433271 JCADQ9P266 1359 aa35.24■■■■□ 3.23
TMEM248-205ENST00000433271 ABCC6O95255 1503 aa35.23■■■■□ 3.23
TMEM248-205ENST00000433271 HSPA1LP34931 641 aa35.23■■■■□ 3.23
TMEM248-205ENST00000433271 PRDM11Q9NQV5 511 aa35.22■■■■□ 3.23
TMEM248-205ENST00000433271 AXIN2Q9Y2T1 843 aa35.22■■■■□ 3.23
TMEM248-205ENST00000433271 CHRNA2Q15822 529 aa35.21■■■■□ 3.23
TMEM248-205ENST00000433271 COL18A1P39060 1754 aa35.2■■■■□ 3.22
TMEM248-205ENST00000433271 LTV1Q96GA3 475 aaPredicted RBP35.17■■■■□ 3.22
TMEM248-205ENST00000433271 FCHSD2O94868 740 aa35.15■■■■□ 3.22
TMEM248-205ENST00000433271 FAM83GA6ND36 823 aa35.14■■■■□ 3.22
TMEM248-205ENST00000433271 ANKRD24Q8TF21 1146 aa35.14■■■■□ 3.22
TMEM248-205ENST00000433271 EYA1Q99502 592 aa35.14■■■■□ 3.22
TMEM248-205ENST00000433271 RGPD1P0DJD0 1748 aa35.13■■■■□ 3.21
TMEM248-205ENST00000433271 PNNQ9H307 717 aaKnown RBP35.13■■■■□ 3.21
TMEM248-205ENST00000433271 ERBB3P21860 1342 aa35.12■■■■□ 3.21
TMEM248-205ENST00000433271 HNRNPUQ00839 825 aaKnown RBP eCLIP35.12■■■■□ 3.21
TMEM248-205ENST00000433271 IGSF1Q8N6C5 1336 aa35.12■■■■□ 3.21
TMEM248-205ENST00000433271 RGPD5Q99666 1765 aa35.11■■■■□ 3.21
TMEM248-205ENST00000433271 CCDC146Q8IYE0 955 aa35.11■■■■□ 3.21
TMEM248-205ENST00000433271 HMOX1P09601 288 aa35.1■■■■□ 3.21
TMEM248-205ENST00000433271 RSPH6AQ9H0K4 717 aa35.1■■■■□ 3.21
TMEM248-205ENST00000433271 SPATA31A6Q5VVP1 1343 aa35.1■■■■□ 3.21
TMEM248-205ENST00000433271 LMO7Q8WWI1 1683 aa35.1■■■■□ 3.21
TMEM248-205ENST00000433271 NUTM2BA6NNL0 878 aaPredicted RBP35.1■■■■□ 3.21
TMEM248-205ENST00000433271 NUTM2EB1AL46 878 aaPredicted RBP35.1■■■■□ 3.21
TMEM248-205ENST00000433271 NUTM2AQ8IVF1 878 aaPredicted RBP35.1■■■■□ 3.21
TMEM248-205ENST00000433271 RUNDC1Q96C34 613 aa35.1■■■■□ 3.21
TMEM248-205ENST00000433271 SULT6B1Q6IMI4 303 aa35.09■■■■□ 3.21
TMEM248-205ENST00000433271 CAMTA1Q9Y6Y1 1673 aa35.08■■■■□ 3.21
TMEM248-205ENST00000433271 PLEKHF1Q96S99 279 aa35.08■■■■□ 3.21
TMEM248-205ENST00000433271 ADAMTS2O95450 1211 aa35.06■■■■□ 3.2
TMEM248-205ENST00000433271 NBPF6Q5VWK0 638 aa35.06■■■■□ 3.2
TMEM248-205ENST00000433271 NBPF4Q96M43 638 aa35.06■■■■□ 3.2
TMEM248-205ENST00000433271 COL14A1Q05707 1796 aaKnown RBP35.06■■■■□ 3.2
TMEM248-205ENST00000433271 KDRP35968 1356 aa35.05■■■■□ 3.2
TMEM248-205ENST00000433271 AEBP1Q8IUX7 1158 aa35.05■■■■□ 3.2
TMEM248-205ENST00000433271 PRKAR2BP31323 418 aa35.04■■■■□ 3.2
TMEM248-205ENST00000433271 CSB-PGBD3P0DP91 1061 aa35.02■■■■□ 3.2
TMEM248-205ENST00000433271 COL5A2P05997 1499 aaPredicted RBP35.02■■■■□ 3.2
TMEM248-205ENST00000433271 APAF1O14727 1248 aa35.01■■■■□ 3.19
TMEM248-205ENST00000433271 BTG4Q9NY30 223 aa35■■■■□ 3.19
TMEM248-205ENST00000433271 WDR17Q8IZU2 1322 aa34.99■■■■□ 3.19
TMEM248-205ENST00000433271 MAPK8IP3Q9UPT6 1336 aa34.99■■■■□ 3.19
TMEM248-205ENST00000433271 NEFMP07197 916 aa34.99■■■■□ 3.19
TMEM248-205ENST00000433271 TCP11L2Q8N4U5 519 aa34.99■■■■□ 3.19
TMEM248-205ENST00000433271 NCAPD2Q15021 1401 aa34.98■■■■□ 3.19
TMEM248-205ENST00000433271 FAM208AQ9UK61 1670 aaKnown RBP34.98■■■■□ 3.19
TMEM248-205ENST00000433271 EVA1CP58658 441 aa34.98■■■■□ 3.19
TMEM248-205ENST00000433271 FBXO41Q8TF61 875 aa34.98■■■■□ 3.19
TMEM248-205ENST00000433271 NLRP2Q9NX02 1062 aa34.98■■■■□ 3.19
TMEM248-205ENST00000433271 RGPD2P0DJD1 1756 aa34.98■■■■□ 3.19
TMEM248-205ENST00000433271 USHBP1Q8N6Y0 703 aa34.97■■■■□ 3.19
TMEM248-205ENST00000433271 SENP3-EIF4A1A0A087X0R7 540 aa34.95■■■■□ 3.19
TMEM248-205ENST00000433271 ZBED9Q6R2W3 1325 aa34.95■■■■□ 3.19
TMEM248-205ENST00000433271 NGEFQ8N5V2 710 aa34.95■■■■□ 3.18
TMEM248-205ENST00000433271 PHACTR3Q96KR7 559 aa34.95■■■■□ 3.18
TMEM248-205ENST00000433271 STRN4Q9NRL3 753 aa34.94■■■■□ 3.18
TMEM248-205ENST00000433271 LRP6O75581 1613 aa34.92■■■■□ 3.18
TMEM248-205ENST00000433271 TOM1L2Q6ZVM7 507 aa34.92■■■■□ 3.18
TMEM248-205ENST00000433271 PLCH1Q4KWH8 1693 aa34.9■■■■□ 3.18
TMEM248-205ENST00000433271 NCBP3Q53F19 620 aaKnown RBP34.9■■■■□ 3.18
TMEM248-205ENST00000433271 LARP1Q6PKG0 1096 aaKnown RBP34.9■■■■□ 3.18
TMEM248-205ENST00000433271 TMPOP42166 694 aaKnown RBP34.89■■■■□ 3.18
TMEM248-205ENST00000433271 SALL2Q9Y467 1007 aaPredicted RBP34.89■■■■□ 3.18
TMEM248-205ENST00000433271 SLIT2O94813 1529 aa34.89■■■■□ 3.18
TMEM248-205ENST00000433271 CARD10Q9BWT7 1032 aa34.88■■■■□ 3.17
TMEM248-205ENST00000433271 NGLY1Q96IV0 654 aa34.88■■■■□ 3.17
TMEM248-205ENST00000433271 C8orf37Q96NL8 207 aa34.87■■■■□ 3.17
TMEM248-205ENST00000433271 RRP7AQ9Y3A4 280 aaKnown RBP34.87■■■■□ 3.17
TMEM248-205ENST00000433271 CRB1P82279 1406 aa34.86■■■■□ 3.17
TMEM248-205ENST00000433271 NWD2Q9ULI1 1742 aa34.86■■■■□ 3.17
TMEM248-205ENST00000433271 NEUROD2Q15784 382 aa34.85■■■■□ 3.17
TMEM248-205ENST00000433271 NFE2L2Q16236 605 aa34.85■■■■□ 3.17
TMEM248-205ENST00000433271 CCDC27Q2M243 656 aa34.83■■■■□ 3.17
TMEM248-205ENST00000433271 FNBP4Q8N3X1 1017 aaPredicted RBP34.83■■■■□ 3.17
TMEM248-205ENST00000433271 RIPK4P57078 832 aa34.82■■■■□ 3.16
TMEM248-205ENST00000433271 MEX3CQ5U5Q3 659 aaKnown RBP34.82■■■■□ 3.16
TMEM248-205ENST00000433271 RAPGEF4Q8WZA2 1011 aa34.82■■■■□ 3.16
TMEM248-205ENST00000433271 NRAPQ86VF7 1730 aa34.81■■■■□ 3.16
TMEM248-205ENST00000433271 PHF23Q9BUL5 403 aaPredicted RBP34.81■■■■□ 3.16
TMEM248-205ENST00000433271 MTHFSDQ2M296 383 aaKnown RBP34.8■■■■□ 3.16
TMEM248-205ENST00000433271 PLEKHG2Q9H7P9 1386 aa34.79■■■■□ 3.16
TMEM248-205ENST00000433271 ZNF521Q96K83 1311 aa34.79■■■■□ 3.16
TMEM248-205ENST00000433271 UNC5CLQ8IV45 518 aa34.79■■■■□ 3.16
TMEM248-205ENST00000433271 GAS2L2Q8NHY3 880 aa34.79■■■■□ 3.16
TMEM248-205ENST00000433271 WWC1Q8IX03 1113 aa34.78■■■■□ 3.16
TMEM248-205ENST00000433271 AMOTQ4VCS5 1084 aa34.77■■■■□ 3.16
TMEM248-205ENST00000433271 TATP17735 454 aaPredicted RBP34.77■■■■□ 3.16
TMEM248-205ENST00000433271 PLEKHO1Q53GL0 409 aaPredicted RBP34.77■■■■□ 3.16
TMEM248-205ENST00000433271 BCL9LQ86UU0 1499 aa34.77■■■■□ 3.16
TMEM248-205ENST00000433271 TRIM35Q9UPQ4 493 aa34.76■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms