RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 SBNO1A3KN83 1393 aa25.32■■□□□ 1.64
VRK2-205ENST00000432057 EXOSC9Q06265 439 aaKnown RBP25.32■■□□□ 1.64
VRK2-205ENST00000432057 BCL2L13Q9BXK5 485 aa25.31■■□□□ 1.64
VRK2-205ENST00000432057 FLT4P35916 1363 aa25.3■■□□□ 1.64
VRK2-205ENST00000432057 NLRP6P59044 892 aa25.3■■□□□ 1.64
VRK2-205ENST00000432057 AEBP1Q8IUX7 1158 aa25.3■■□□□ 1.64
VRK2-205ENST00000432057 STRCP1A6NGW2 1772 aa25.3■■□□□ 1.64
VRK2-205ENST00000432057 C14orf37Q86TY3 774 aa25.3■■□□□ 1.64
VRK2-205ENST00000432057 FRAT1Q92837 279 aaPredicted RBP25.3■■□□□ 1.64
VRK2-205ENST00000432057 PDE3AQ14432 1141 aa25.29■■□□□ 1.64
VRK2-205ENST00000432057 NUTM2GQ5VZR2 741 aa25.29■■□□□ 1.64
VRK2-205ENST00000432057 PAK3O75914 559 aaPredicted RBP25.28■■□□□ 1.64
VRK2-205ENST00000432057 CT47B1P0C2W7 299 aaPredicted RBP25.28■■□□□ 1.64
VRK2-205ENST00000432057 SULT6B1Q6IMI4 303 aa25.28■■□□□ 1.64
VRK2-205ENST00000432057 PANK1Q8TE04 598 aa25.27■■□□□ 1.64
VRK2-205ENST00000432057 THUMPD2Q9BTF0 503 aaKnown RBP25.27■■□□□ 1.64
VRK2-205ENST00000432057 ABTB2Q8N961 1025 aa25.26■■□□□ 1.63
VRK2-205ENST00000432057 ESCO1Q5FWF5 840 aa25.25■■□□□ 1.63
VRK2-205ENST00000432057 ARHGEF10O15013 1369 aa25.25■■□□□ 1.63
VRK2-205ENST00000432057 TNNQ9UQP3 1299 aa25.24■■□□□ 1.63
VRK2-205ENST00000432057 KDM2BQ8NHM5 1336 aa25.24■■□□□ 1.63
VRK2-205ENST00000432057 AMPHP49418 695 aa25.23■■□□□ 1.63
VRK2-205ENST00000432057 COG6Q9Y2V7 657 aa25.23■■□□□ 1.63
VRK2-205ENST00000432057 LAS1LQ9Y4W2 734 aaKnown RBP25.23■■□□□ 1.63
VRK2-205ENST00000432057 KIF1AQ12756 1690 aa25.22■■□□□ 1.63
VRK2-205ENST00000432057 PROSER2Q86WR7 435 aaPredicted RBP25.22■■□□□ 1.63
VRK2-205ENST00000432057 TRPM3Q9HCF6 1732 aaPredicted RBP25.22■■□□□ 1.63
VRK2-205ENST00000432057 LMOD3Q0VAK6 560 aa25.21■■□□□ 1.63
VRK2-205ENST00000432057 NFAT5O94916 1531 aa25.21■■□□□ 1.63
VRK2-205ENST00000432057 CALD1Q05682 793 aaKnown RBP25.21■■□□□ 1.63
VRK2-205ENST00000432057 SMC4Q9NTJ3 1288 aa25.2■■□□□ 1.62
VRK2-205ENST00000432057 LMTK3Q96Q04 1460 aa25.2■■□□□ 1.62
VRK2-205ENST00000432057 RLBP1P12271 317 aa25.19■■□□□ 1.62
VRK2-205ENST00000432057 FAM83GA6ND36 823 aa25.19■■□□□ 1.62
VRK2-205ENST00000432057 SSH1Q8WYL5 1049 aa25.19■■□□□ 1.62
VRK2-205ENST00000432057 KIF24Q5T7B8 1368 aa25.18■■□□□ 1.62
VRK2-205ENST00000432057 PSME1Q06323 249 aa25.18■■□□□ 1.62
VRK2-205ENST00000432057 ORAI2Q96SN7 254 aa25.18■■□□□ 1.62
VRK2-205ENST00000432057 IFT57Q9NWB7 429 aa25.18■■□□□ 1.62
VRK2-205ENST00000432057 GNAI1P63096 354 aa25.17■■□□□ 1.62
VRK2-205ENST00000432057 CENPQQ7L2Z9 268 aaPredicted RBP25.17■■□□□ 1.62
VRK2-205ENST00000432057 HOXC9P31274 260 aa25.17■■□□□ 1.62
VRK2-205ENST00000432057 KDRP35968 1356 aa25.17■■□□□ 1.62
VRK2-205ENST00000432057 ZNF853P0CG23 659 aa25.16■■□□□ 1.62
VRK2-205ENST00000432057 HSPA2P54652 639 aa25.16■■□□□ 1.62
VRK2-205ENST00000432057 DCTN1Q14203 1278 aa25.16■■□□□ 1.62
VRK2-205ENST00000432057 ZKSCAN2Q63HK3 967 aa25.16■■□□□ 1.62
VRK2-205ENST00000432057 IGSF1Q8N6C5 1336 aa25.16■■□□□ 1.62
VRK2-205ENST00000432057 PHRF1Q9P1Y6 1649 aaKnown RBP25.16■■□□□ 1.62
VRK2-205ENST00000432057 CLUAP1Q96AJ1 413 aa25.15■■□□□ 1.62
VRK2-205ENST00000432057 MBIPQ9NS73 344 aa25.15■■□□□ 1.62
VRK2-205ENST00000432057 C1orf167Q5SNV9 1468 aa25.15■■□□□ 1.62
VRK2-205ENST00000432057 RTL1A6NKG5 1358 aa25.14■■□□□ 1.62
VRK2-205ENST00000432057 SKAP1Q86WV1 359 aa25.14■■□□□ 1.61
VRK2-205ENST00000432057 EYA1Q99502 592 aa25.14■■□□□ 1.61
VRK2-205ENST00000432057 RGPD2P0DJD1 1756 aa25.14■■□□□ 1.61
VRK2-205ENST00000432057 TCERG1O14776 1098 aaKnown RBP25.13■■□□□ 1.61
VRK2-205ENST00000432057 XIRP1Q702N8 1843 aaKnown RBP25.12■■□□□ 1.61
VRK2-205ENST00000432057 XPCQ01831 940 aaPredicted RBP25.11■■□□□ 1.61
VRK2-205ENST00000432057 CFAP44Q96MT7 982 aa25.11■■□□□ 1.61
VRK2-205ENST00000432057 SLIT3O75094 1523 aa25.11■■□□□ 1.61
VRK2-205ENST00000432057 FOXO3O43524 673 aa25.11■■□□□ 1.61
VRK2-205ENST00000432057 STRCQ7RTU9 1775 aa25.1■■□□□ 1.61
VRK2-205ENST00000432057 ALS2Q96Q42 1657 aa25.1■■□□□ 1.61
VRK2-205ENST00000432057 ALDH1L2Q3SY69 923 aa25.1■■□□□ 1.61
VRK2-205ENST00000432057 C19orf44Q9H6X5 657 aa25.1■■□□□ 1.61
VRK2-205ENST00000432057 TMEM94Q12767 1356 aa25.1■■□□□ 1.61
VRK2-205ENST00000432057 FTSJ3Q8IY81 847 aaKnown RBP25.09■■□□□ 1.61
VRK2-205ENST00000432057 DZIP1LQ8IYY4 767 aaKnown RBP25.09■■□□□ 1.61
VRK2-205ENST00000432057 TRIM27P14373 513 aa25.09■■□□□ 1.61
VRK2-205ENST00000432057 NOB1Q9ULX3 412 aaKnown RBP25.09■■□□□ 1.61
VRK2-205ENST00000432057 LRRC37A3O60309 1634 aa25.08■■□□□ 1.61
VRK2-205ENST00000432057 KIF16BQ96L93 1317 aa25.08■■□□□ 1.61
VRK2-205ENST00000432057 MST1RQ04912 1400 aa25.08■■□□□ 1.61
VRK2-205ENST00000432057 MVPQ14764 893 aaKnown RBP25.08■■□□□ 1.61
VRK2-205ENST00000432057 MCM10Q7L590 875 aa25.08■■□□□ 1.61
VRK2-205ENST00000432057 TSPYL6Q8N831 410 aa25.08■■□□□ 1.61
VRK2-205ENST00000432057 LTV1Q96GA3 475 aaPredicted RBP25.07■■□□□ 1.6
VRK2-205ENST00000432057 VAMP4O75379 141 aa25.06■■□□□ 1.6
VRK2-205ENST00000432057 MS4A1P11836 297 aa25.06■■□□□ 1.6
VRK2-205ENST00000432057 MTHFSDQ2M296 383 aaKnown RBP25.06■■□□□ 1.6
VRK2-205ENST00000432057 ATF7IPQ6VMQ6 1270 aa25.06■■□□□ 1.6
VRK2-205ENST00000432057 ZNF428Q96B54 188 aa25.06■■□□□ 1.6
VRK2-205ENST00000432057 IGHDP01880 384 aa25.05■■□□□ 1.6
VRK2-205ENST00000432057 DCCP43146 1447 aa25.05■■□□□ 1.6
VRK2-205ENST00000432057 AAMPQ13685 434 aa25.04■■□□□ 1.6
VRK2-205ENST00000432057 ELL2O00472 640 aaPredicted RBP25.04■■□□□ 1.6
VRK2-205ENST00000432057 KCNH5Q8NCM2 988 aa25.04■■□□□ 1.6
VRK2-205ENST00000432057 CRB1P82279 1406 aa25.04■■□□□ 1.6
VRK2-205ENST00000432057 RGPD5Q99666 1765 aa25.03■■□□□ 1.6
VRK2-205ENST00000432057 TWISTNBQ3B726 338 aaPredicted RBP25.03■■□□□ 1.6
VRK2-205ENST00000432057 C8orf58Q8NAV2 365 aa25.03■■□□□ 1.6
VRK2-205ENST00000432057 IP6K1Q92551 441 aa25.03■■□□□ 1.6
VRK2-205ENST00000432057 NCOA3Q9Y6Q9 1424 aa25.02■■□□□ 1.6
VRK2-205ENST00000432057 ZBTB7CA1YPR0 619 aa25.02■■□□□ 1.6
VRK2-205ENST00000432057 KRT28Q7Z3Y7 464 aa25.02■■□□□ 1.6
VRK2-205ENST00000432057 ATF3P18847 181 aa25.02■■□□□ 1.6
VRK2-205ENST00000432057 MRPL50Q8N5N7 158 aaKnown RBP25.01■■□□□ 1.59
VRK2-205ENST00000432057 IPO8O15397 1037 aaKnown RBP25■■□□□ 1.59
VRK2-205ENST00000432057 PLEKHG5O94827 1062 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms