RNA–Protein interactions for RNA: ENST00000431275.1

SPTLC3-202, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 2

Gene SPTLC3, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-202ENST00000431275 LMO7Q8WWI1 1683 aa15.2■□□□□ 0.02
SPTLC3-202ENST00000431275 RRS1Q15050 365 aaKnown RBP15.2■□□□□ 0.02
SPTLC3-202ENST00000431275 COL18A1P39060 1754 aa15.19■□□□□ 0.02
SPTLC3-202ENST00000431275 LARP1Q6PKG0 1096 aaKnown RBP15.19■□□□□ 0.02
SPTLC3-202ENST00000431275 IP6K1Q92551 441 aa15.19■□□□□ 0.02
SPTLC3-202ENST00000431275 NRAPQ86VF7 1730 aa15.19■□□□□ 0.02
SPTLC3-202ENST00000431275 NSD2O96028 1365 aa15.19■□□□□ 0.02
SPTLC3-202ENST00000431275 SPATA31A5Q5VU36 1347 aa15.18■□□□□ 0.02
SPTLC3-202ENST00000431275 SPATA31A7Q8IWB4 1347 aa15.18■□□□□ 0.02
SPTLC3-202ENST00000431275 AMPHP49418 695 aa15.18■□□□□ 0.02
SPTLC3-202ENST00000431275 MORC1Q86VD1 984 aa15.18■□□□□ 0.02
SPTLC3-202ENST00000431275 COL5A2P05997 1499 aaPredicted RBP15.18■□□□□ 0.02
SPTLC3-202ENST00000431275 TNNT2P45379 298 aaPredicted RBP15.17■□□□□ 0.02
SPTLC3-202ENST00000431275 HOXC9P31274 260 aa15.16■□□□□ 0.02
SPTLC3-202ENST00000431275 CC2D1BQ5T0F9 858 aaKnown RBP15.16■□□□□ 0.02
SPTLC3-202ENST00000431275 SPATA31A1Q5TZJ5 1347 aa15.16■□□□□ 0.02
SPTLC3-202ENST00000431275 WDR17Q8IZU2 1322 aa15.16■□□□□ 0.02
SPTLC3-202ENST00000431275 GLI3P10071 1580 aa15.15■□□□□ 0.02
SPTLC3-202ENST00000431275 ONECUT3O60422 494 aaPredicted RBP15.15■□□□□ 0.02
SPTLC3-202ENST00000431275 CSB-PGBD3P0DP91 1061 aa15.15■□□□□ 0.02
SPTLC3-202ENST00000431275 TOM1L2Q6ZVM7 507 aa15.15■□□□□ 0.02
SPTLC3-202ENST00000431275 USP35Q9P2H5 1018 aa15.15■□□□□ 0.02
SPTLC3-202ENST00000431275 POLKQ9UBT6 870 aa15.15■□□□□ 0.02
SPTLC3-202ENST00000431275 EMILIN1Q9Y6C2 1016 aa15.15■□□□□ 0.02
SPTLC3-202ENST00000431275 ABCC6O95255 1503 aa15.15■□□□□ 0.02
SPTLC3-202ENST00000431275 LTN1O94822 1766 aa15.15■□□□□ 0.02
SPTLC3-202ENST00000431275 CDK12Q9NYV4 1490 aaPredicted RBP15.14■□□□□ 0.01
SPTLC3-202ENST00000431275 DDX10Q13206 875 aaKnown RBP15.14■□□□□ 0.01
SPTLC3-202ENST00000431275 CNGB1Q14028 1251 aaPredicted RBP15.14■□□□□ 0.01
SPTLC3-202ENST00000431275 FAM98CQ17RN3 349 aaKnown RBP15.14■□□□□ 0.01
SPTLC3-202ENST00000431275 ANKRD24Q8TF21 1146 aa15.14■□□□□ 0.01
SPTLC3-202ENST00000431275 NPC1L1Q9UHC9 1359 aa15.13■□□□□ 0.01
SPTLC3-202ENST00000431275 PPM1GO15355 546 aaPredicted RBP15.13■□□□□ 0.01
SPTLC3-202ENST00000431275 BLMP54132 1417 aaPredicted RBP15.13■□□□□ 0.01
SPTLC3-202ENST00000431275 CRB1P82279 1406 aa15.13■□□□□ 0.01
SPTLC3-202ENST00000431275 TCP11L2Q8N4U5 519 aa15.13■□□□□ 0.01
SPTLC3-202ENST00000431275 LTV1Q96GA3 475 aaPredicted RBP15.13■□□□□ 0.01
SPTLC3-202ENST00000431275 ERBB3P21860 1342 aa15.13■□□□□ 0.01
SPTLC3-202ENST00000431275 RTL1A6NKG5 1358 aa15.12■□□□□ 0.01
SPTLC3-202ENST00000431275 KIF24Q5T7B8 1368 aa15.12■□□□□ 0.01
SPTLC3-202ENST00000431275 ANKRD26Q9UPS8 1709 aa15.12■□□□□ 0.01
SPTLC3-202ENST00000431275 RGS12O14924 1447 aa15.12■□□□□ 0.01
SPTLC3-202ENST00000431275 RGPD5Q99666 1765 aa15.12■□□□□ 0.01
SPTLC3-202ENST00000431275 ZNF316A6NFI3 1004 aaPredicted RBP15.12■□□□□ 0.01
SPTLC3-202ENST00000431275 HSP90AB2PQ58FF8 381 aa15.12■□□□□ 0.01
SPTLC3-202ENST00000431275 SEPT12Q8IYM1 358 aa15.12■□□□□ 0.01
SPTLC3-202ENST00000431275 CARD10Q9BWT7 1032 aa15.12■□□□□ 0.01
SPTLC3-202ENST00000431275 THRAP3Q9Y2W1 955 aaKnown RBP15.12■□□□□ 0.01
SPTLC3-202ENST00000431275 FLT4P35916 1363 aa15.11■□□□□ 0.01
SPTLC3-202ENST00000431275 BARGINQ6ZT62 677 aa15.11■□□□□ 0.01
SPTLC3-202ENST00000431275 NLRP2Q9NX02 1062 aa15.11■□□□□ 0.01
SPTLC3-202ENST00000431275 INSRP06213 1382 aa15.11■□□□□ 0.01
SPTLC3-202ENST00000431275 A0A0G2JS52 829 aa15.1■□□□□ 0.01
SPTLC3-202ENST00000431275 MYT1Q01538 1121 aa15.1■□□□□ 0.01
SPTLC3-202ENST00000431275 PEAK1Q9H792 1746 aa15.09■□□□□ 0.01
SPTLC3-202ENST00000431275 MAP2P11137 1827 aaKnown RBP15.08■□□□□ 0
SPTLC3-202ENST00000431275 MTHFSP49914 203 aa15.06■□□□□ 0
SPTLC3-202ENST00000431275 NBPF6Q5VWK0 638 aa15.06■□□□□ 0
SPTLC3-202ENST00000431275 NBPF4Q96M43 638 aa15.06■□□□□ 0
SPTLC3-202ENST00000431275 KRT27Q7Z3Y8 459 aa15.05■□□□□ -0
SPTLC3-202ENST00000431275 CDCA7Q9BWT1 371 aaPredicted RBP15.05■□□□□ -0
SPTLC3-202ENST00000431275 SMG6Q86US8 1419 aaKnown RBP15.05■□□□□ -0
SPTLC3-202ENST00000431275 SOCS7O14512 581 aa15.04■□□□□ -0
SPTLC3-202ENST00000431275 THSD7AQ9UPZ6 1657 aa15.03■□□□□ -0
SPTLC3-202ENST00000431275 IL2RBP14784 551 aa15.03■□□□□ -0
SPTLC3-202ENST00000431275 EIF4A2Q14240 407 aaKnown RBP15.03■□□□□ -0
SPTLC3-202ENST00000431275 USHBP1Q8N6Y0 703 aa15.03■□□□□ -0
SPTLC3-202ENST00000431275 PDE3BQ13370 1112 aa15.02■□□□□ -0
SPTLC3-202ENST00000431275 DDB1Q16531 1140 aa15.02■□□□□ -0
SPTLC3-202ENST00000431275 EYA1Q99502 592 aa15.02■□□□□ -0
SPTLC3-202ENST00000431275 DISP2A7MBM2 1401 aa15.01□□□□□ -0.01
SPTLC3-202ENST00000431275 EXOC5O00471 708 aa15.01□□□□□ -0.01
SPTLC3-202ENST00000431275 PPP2R1AP30153 589 aa15.01□□□□□ -0.01
SPTLC3-202ENST00000431275 FAM208AQ9UK61 1670 aaKnown RBP15□□□□□ -0.01
SPTLC3-202ENST00000431275 FAM182BQ5T319 152 aa15□□□□□ -0.01
SPTLC3-202ENST00000431275 BRWD3Q6RI45 1802 aa15□□□□□ -0.01
SPTLC3-202ENST00000431275 PARD3Q8TEW0 1356 aa14.99□□□□□ -0.01
SPTLC3-202ENST00000431275 RGPD2P0DJD1 1756 aa14.99□□□□□ -0.01
SPTLC3-202ENST00000431275 IL13P35225 146 aa14.99□□□□□ -0.01
SPTLC3-202ENST00000431275 RALBP1Q15311 655 aa14.99□□□□□ -0.01
SPTLC3-202ENST00000431275 RAPGEF4Q8WZA2 1011 aa14.98□□□□□ -0.01
SPTLC3-202ENST00000431275 PARP4Q9UKK3 1724 aaKnown RBP14.97□□□□□ -0.01
SPTLC3-202ENST00000431275 DIAPH1O60610 1272 aaKnown RBP14.97□□□□□ -0.01
SPTLC3-202ENST00000431275 TATP17735 454 aaPredicted RBP14.97□□□□□ -0.01
SPTLC3-202ENST00000431275 MARCH10Q8NA82 808 aaPredicted RBP14.97□□□□□ -0.01
SPTLC3-202ENST00000431275 UPF1Q92900 1129 aaKnown RBP eCLIP14.97□□□□□ -0.01
SPTLC3-202ENST00000431275 IGSF1Q8N6C5 1336 aa14.96□□□□□ -0.01
SPTLC3-202ENST00000431275 NCAPD2Q15021 1401 aa14.96□□□□□ -0.01
SPTLC3-202ENST00000431275 FAM196AQ6ZSG2 479 aa14.96□□□□□ -0.01
SPTLC3-202ENST00000431275 CFAP53Q96M91 514 aa14.96□□□□□ -0.01
SPTLC3-202ENST00000431275 WNK3Q9BYP7 1800 aa14.96□□□□□ -0.01
SPTLC3-202ENST00000431275 ZCRB1Q8TBF4 217 aaKnown RBP14.95□□□□□ -0.02
SPTLC3-202ENST00000431275 MEGF6O75095 1541 aa14.95□□□□□ -0.02
SPTLC3-202ENST00000431275 LRRC37A3O60309 1634 aa14.95□□□□□ -0.02
SPTLC3-202ENST00000431275 DDX54Q8TDD1 881 aaKnown RBP14.94□□□□□ -0.02
SPTLC3-202ENST00000431275 OVOS2A0A0G2JMS6 1433 aa14.93□□□□□ -0.02
SPTLC3-202ENST00000431275 TNS2Q63HR2 1409 aa14.93□□□□□ -0.02
SPTLC3-202ENST00000431275 SULT6B1Q6IMI4 303 aa14.93□□□□□ -0.02
SPTLC3-202ENST00000431275 AEBP1Q8IUX7 1158 aa14.93□□□□□ -0.02
SPTLC3-202ENST00000431275 PRKRIP1Q9H875 184 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms