RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 CGNL1Q0VF96 1302 aa23.96■■□□□ 1.43
CTDSP1-203ENST00000431127 LARP1Q6PKG0 1096 aaKnown RBP23.96■■□□□ 1.43
CTDSP1-203ENST00000431127 SEPT12Q8IYM1 358 aa23.96■■□□□ 1.43
CTDSP1-203ENST00000431127 ABCC6O95255 1503 aa23.95■■□□□ 1.43
CTDSP1-203ENST00000431127 KIF7Q2M1P5 1343 aa23.95■■□□□ 1.42
CTDSP1-203ENST00000431127 FAM98CQ17RN3 349 aaKnown RBP23.95■■□□□ 1.42
CTDSP1-203ENST00000431127 AXIN2Q9Y2T1 843 aa23.95■■□□□ 1.42
CTDSP1-203ENST00000431127 PANK3Q9H999 370 aa23.94■■□□□ 1.42
CTDSP1-203ENST00000431127 COL18A1P39060 1754 aa23.93■■□□□ 1.42
CTDSP1-203ENST00000431127 A0A0G2JS52 829 aa23.93■■□□□ 1.42
CTDSP1-203ENST00000431127 MYT1Q01538 1121 aa23.93■■□□□ 1.42
CTDSP1-203ENST00000431127 THRAP3Q9Y2W1 955 aaKnown RBP23.93■■□□□ 1.42
CTDSP1-203ENST00000431127 TCP11L2Q8N4U5 519 aa23.92■■□□□ 1.42
CTDSP1-203ENST00000431127 USP35Q9P2H5 1018 aa23.92■■□□□ 1.42
CTDSP1-203ENST00000431127 EP400Q96L91 3159 aa23.92■■□□□ 1.42
CTDSP1-203ENST00000431127 CRB1P82279 1406 aa23.92■■□□□ 1.42
CTDSP1-203ENST00000431127 WDR17Q8IZU2 1322 aa23.91■■□□□ 1.42
CTDSP1-203ENST00000431127 BARGINQ6ZT62 677 aa23.91■■□□□ 1.42
CTDSP1-203ENST00000431127 CSB-PGBD3P0DP91 1061 aa23.9■■□□□ 1.42
CTDSP1-203ENST00000431127 TOM1L2Q6ZVM7 507 aa23.9■■□□□ 1.42
CTDSP1-203ENST00000431127 IP6K1Q92551 441 aa23.89■■□□□ 1.41
CTDSP1-203ENST00000431127 KIF20BQ96Q89 1820 aa23.88■■□□□ 1.41
CTDSP1-203ENST00000431127 MAP3K19Q56UN5 1328 aa23.87■■□□□ 1.41
CTDSP1-203ENST00000431127 BLMP54132 1417 aaPredicted RBP23.87■■□□□ 1.41
CTDSP1-203ENST00000431127 AMPHP49418 695 aa23.87■■□□□ 1.41
CTDSP1-203ENST00000431127 KRT27Q7Z3Y8 459 aa23.87■■□□□ 1.41
CTDSP1-203ENST00000431127 KNSTRNQ9Y448 316 aa23.86■■□□□ 1.41
CTDSP1-203ENST00000431127 CCDC7Q96M83 1385 aa23.86■■□□□ 1.41
CTDSP1-203ENST00000431127 LTN1O94822 1766 aa23.86■■□□□ 1.41
CTDSP1-203ENST00000431127 CARD10Q9BWT7 1032 aa23.85■■□□□ 1.41
CTDSP1-203ENST00000431127 ERBB3P21860 1342 aa23.84■■□□□ 1.41
CTDSP1-203ENST00000431127 FBLN1P23142 703 aa23.84■■□□□ 1.41
CTDSP1-203ENST00000431127 WASHC2AQ641Q2 1341 aa23.84■■□□□ 1.41
CTDSP1-203ENST00000431127 RTL1A6NKG5 1358 aa23.83■■□□□ 1.41
CTDSP1-203ENST00000431127 NSD2O96028 1365 aa23.83■■□□□ 1.41
CTDSP1-203ENST00000431127 HOXC9P31274 260 aa23.83■■□□□ 1.41
CTDSP1-203ENST00000431127 RRS1Q15050 365 aaKnown RBP23.83■■□□□ 1.41
CTDSP1-203ENST00000431127 ANKRD24Q8TF21 1146 aa23.83■■□□□ 1.41
CTDSP1-203ENST00000431127 THSD7AQ9UPZ6 1657 aa23.83■■□□□ 1.4
CTDSP1-203ENST00000431127 SF3B2Q13435 895 aaKnown RBP23.82■■□□□ 1.4
CTDSP1-203ENST00000431127 CDCA7Q9BWT1 371 aaPredicted RBP23.82■■□□□ 1.4
CTDSP1-203ENST00000431127 BRWD3Q6RI45 1802 aa23.82■■□□□ 1.4
CTDSP1-203ENST00000431127 KIF24Q5T7B8 1368 aa23.81■■□□□ 1.4
CTDSP1-203ENST00000431127 RGPD5Q99666 1765 aa23.81■■□□□ 1.4
CTDSP1-203ENST00000431127 ZEB1P37275 1124 aaPredicted RBP23.81■■□□□ 1.4
CTDSP1-203ENST00000431127 DEFB132Q7Z7B7 95 aa23.8■■□□□ 1.4
CTDSP1-203ENST00000431127 NLRP2Q9NX02 1062 aa23.8■■□□□ 1.4
CTDSP1-203ENST00000431127 SRCAPQ6ZRS2 3230 aa23.78■■□□□ 1.4
CTDSP1-203ENST00000431127 PDE3BQ13370 1112 aa23.78■■□□□ 1.4
CTDSP1-203ENST00000431127 FLT4P35916 1363 aa23.77■■□□□ 1.4
CTDSP1-203ENST00000431127 LTV1Q96GA3 475 aaPredicted RBP23.76■■□□□ 1.39
CTDSP1-203ENST00000431127 MORC1Q86VD1 984 aa23.75■■□□□ 1.39
CTDSP1-203ENST00000431127 PER1O15534 1290 aaPredicted RBP23.74■■□□□ 1.39
CTDSP1-203ENST00000431127 AMER1Q5JTC6 1135 aaPredicted RBP23.74■■□□□ 1.39
CTDSP1-203ENST00000431127 INSRP06213 1382 aa23.74■■□□□ 1.39
CTDSP1-203ENST00000431127 SMG6Q86US8 1419 aaKnown RBP23.74■■□□□ 1.39
CTDSP1-203ENST00000431127 ANKRD26Q9UPS8 1709 aa23.73■■□□□ 1.39
CTDSP1-203ENST00000431127 PPM1GO15355 546 aaPredicted RBP23.73■■□□□ 1.39
CTDSP1-203ENST00000431127 TNNT2P45379 298 aaPredicted RBP23.73■■□□□ 1.39
CTDSP1-203ENST00000431127 DDB1Q16531 1140 aa23.73■■□□□ 1.39
CTDSP1-203ENST00000431127 EMILIN1Q9Y6C2 1016 aa23.73■■□□□ 1.39
CTDSP1-203ENST00000431127 HSP90AB2PQ58FF8 381 aa23.72■■□□□ 1.39
CTDSP1-203ENST00000431127 FAM196AQ6ZSG2 479 aa23.72■■□□□ 1.39
CTDSP1-203ENST00000431127 POLKQ9UBT6 870 aa23.72■■□□□ 1.39
CTDSP1-203ENST00000431127 PARP4Q9UKK3 1724 aaKnown RBP23.71■■□□□ 1.39
CTDSP1-203ENST00000431127 FAM208AQ9UK61 1670 aaKnown RBP23.7■■□□□ 1.39
CTDSP1-203ENST00000431127 DISP2A7MBM2 1401 aa23.7■■□□□ 1.38
CTDSP1-203ENST00000431127 IL2RBP14784 551 aa23.7■■□□□ 1.38
CTDSP1-203ENST00000431127 EXOC5O00471 708 aa23.69■■□□□ 1.38
CTDSP1-203ENST00000431127 BAG6P46379 1132 aa23.69■■□□□ 1.38
CTDSP1-203ENST00000431127 FAM182BQ5T319 152 aa23.69■■□□□ 1.38
CTDSP1-203ENST00000431127 PEAK1Q9H792 1746 aa23.67■■□□□ 1.38
CTDSP1-203ENST00000431127 NPC1L1Q9UHC9 1359 aa23.67■■□□□ 1.38
CTDSP1-203ENST00000431127 NBPF6Q5VWK0 638 aa23.65■■□□□ 1.38
CTDSP1-203ENST00000431127 NBPF4Q96M43 638 aa23.65■■□□□ 1.38
CTDSP1-203ENST00000431127 MAP2P11137 1827 aaKnown RBP23.65■■□□□ 1.38
CTDSP1-203ENST00000431127 WNK3Q9BYP7 1800 aa23.65■■□□□ 1.38
CTDSP1-203ENST00000431127 LRRC37A3O60309 1634 aa23.65■■□□□ 1.38
CTDSP1-203ENST00000431127 CC2D1BQ5T0F9 858 aaKnown RBP23.64■■□□□ 1.37
CTDSP1-203ENST00000431127 OVOS2A0A0G2JMS6 1433 aa23.63■■□□□ 1.37
CTDSP1-203ENST00000431127 EN1Q05925 392 aaPredicted RBP23.63■■□□□ 1.37
CTDSP1-203ENST00000431127 TNS2Q63HR2 1409 aa23.63■■□□□ 1.37
CTDSP1-203ENST00000431127 MARCH10Q8NA82 808 aaPredicted RBP23.61■■□□□ 1.37
CTDSP1-203ENST00000431127 RAPGEF4Q8WZA2 1011 aa23.6■■□□□ 1.37
CTDSP1-203ENST00000431127 TRIM37O94972 964 aa23.59■■□□□ 1.37
CTDSP1-203ENST00000431127 BCL9O00512 1426 aa23.59■■□□□ 1.37
CTDSP1-203ENST00000431127 USHBP1Q8N6Y0 703 aa23.58■■□□□ 1.37
CTDSP1-203ENST00000431127 EIF4A2Q14240 407 aaKnown RBP23.57■■□□□ 1.36
CTDSP1-203ENST00000431127 TATP17735 454 aaPredicted RBP23.56■■□□□ 1.36
CTDSP1-203ENST00000431127 EYA1Q99502 592 aa23.56■■□□□ 1.36
CTDSP1-203ENST00000431127 RGPD2P0DJD1 1756 aa23.55■■□□□ 1.36
CTDSP1-203ENST00000431127 ZCRB1Q8TBF4 217 aaKnown RBP23.55■■□□□ 1.36
CTDSP1-203ENST00000431127 RGPD1P0DJD0 1748 aa23.55■■□□□ 1.36
CTDSP1-203ENST00000431127 PSDA5PKW4 1024 aaPredicted RBP23.54■■□□□ 1.36
CTDSP1-203ENST00000431127 MTHFSP49914 203 aa23.54■■□□□ 1.36
CTDSP1-203ENST00000431127 CNGB1Q14028 1251 aaPredicted RBP23.54■■□□□ 1.36
CTDSP1-203ENST00000431127 MEGF6O75095 1541 aa23.54■■□□□ 1.36
CTDSP1-203ENST00000431127 NCAPD2Q15021 1401 aa23.53■■□□□ 1.36
CTDSP1-203ENST00000431127 EZH2Q15910 746 aaKnown RBP23.53■■□□□ 1.36
CTDSP1-203ENST00000431127 CAMKK2Q96RR4 588 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms