RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 ZBTB7CA1YPR0 619 aa32■■■□□ 2.71
PTPRA-207ENST00000431048 PROM2Q8N271 834 aa32■■■□□ 2.71
PTPRA-207ENST00000431048 LRRC37A3O60309 1634 aa32■■■□□ 2.71
PTPRA-207ENST00000431048 AXIN2Q9Y2T1 843 aa31.99■■■□□ 2.71
PTPRA-207ENST00000431048 PTF1AQ7RTS3 328 aa31.98■■■□□ 2.71
PTPRA-207ENST00000431048 MARCH10Q8NA82 808 aaPredicted RBP31.98■■■□□ 2.71
PTPRA-207ENST00000431048 COL18A1P39060 1754 aa31.97■■■□□ 2.71
PTPRA-207ENST00000431048 ARHGEF25Q86VW2 580 aa31.95■■■□□ 2.71
PTPRA-207ENST00000431048 CASZ1Q86V15 1759 aa31.94■■■□□ 2.7
PTPRA-207ENST00000431048 CARD10Q9BWT7 1032 aa31.94■■■□□ 2.7
PTPRA-207ENST00000431048 KCNH5Q8NCM2 988 aa31.93■■■□□ 2.7
PTPRA-207ENST00000431048 ZNF692Q9BU19 519 aaPredicted RBP31.92■■■□□ 2.7
PTPRA-207ENST00000431048 PDGFDQ9GZP0 370 aaPredicted RBP31.91■■■□□ 2.7
PTPRA-207ENST00000431048 CPSF1Q10570 1443 aaKnown RBP31.91■■■□□ 2.7
PTPRA-207ENST00000431048 PTGER2P43116 358 aa31.9■■■□□ 2.7
PTPRA-207ENST00000431048 EVC2Q86UK5 1308 aa31.89■■■□□ 2.7
PTPRA-207ENST00000431048 PIK3C2AO00443 1686 aa31.89■■■□□ 2.7
PTPRA-207ENST00000431048 QRICH2Q9H0J4 1663 aa31.89■■■□□ 2.7
PTPRA-207ENST00000431048 TXNRD1Q16881 649 aa31.88■■■□□ 2.69
PTPRA-207ENST00000431048 TTC21BQ7Z4L5 1316 aa31.88■■■□□ 2.69
PTPRA-207ENST00000431048 EXOC5O00471 708 aa31.87■■■□□ 2.69
PTPRA-207ENST00000431048 ZBTB7AO95365 584 aa31.87■■■□□ 2.69
PTPRA-207ENST00000431048 WNK3Q9BYP7 1800 aa31.86■■■□□ 2.69
PTPRA-207ENST00000431048 STK32BQ9NY57 414 aa31.86■■■□□ 2.69
PTPRA-207ENST00000431048 SLC15A2Q16348 729 aa31.85■■■□□ 2.69
PTPRA-207ENST00000431048 TTC21AQ8NDW8 1320 aa31.84■■■□□ 2.69
PTPRA-207ENST00000431048 CSB-PGBD3P0DP91 1061 aa31.83■■■□□ 2.69
PTPRA-207ENST00000431048 CCDC7Q96M83 1385 aa31.82■■■□□ 2.69
PTPRA-207ENST00000431048 ATF5Q9Y2D1 282 aaPredicted RBP31.82■■■□□ 2.68
PTPRA-207ENST00000431048 AKAP12Q02952 1782 aa31.81■■■□□ 2.68
PTPRA-207ENST00000431048 MTFR1LQ9H019 292 aa31.79■■■□□ 2.68
PTPRA-207ENST00000431048 SYT17Q9BSW7 474 aa31.78■■■□□ 2.68
PTPRA-207ENST00000431048 TRPM1Q7Z4N2 1603 aa31.78■■■□□ 2.68
PTPRA-207ENST00000431048 SGIP1Q9BQI5 828 aa31.77■■■□□ 2.68
PTPRA-207ENST00000431048 MYOM1P52179 1685 aa31.76■■■□□ 2.68
PTPRA-207ENST00000431048 ABCC6O95255 1503 aa31.76■■■□□ 2.68
PTPRA-207ENST00000431048 L3MBTL2Q969R5 705 aa31.76■■■□□ 2.67
PTPRA-207ENST00000431048 RGPD5Q99666 1765 aa31.76■■■□□ 2.67
PTPRA-207ENST00000431048 NFAT5O94916 1531 aa31.75■■■□□ 2.67
PTPRA-207ENST00000431048 SOX12O15370 315 aa31.75■■■□□ 2.67
PTPRA-207ENST00000431048 FHDC1Q9C0D6 1143 aaPredicted RBP31.75■■■□□ 2.67
PTPRA-207ENST00000431048 TNS2Q63HR2 1409 aa31.75■■■□□ 2.67
PTPRA-207ENST00000431048 ZNF784Q8NCA9 323 aaPredicted RBP31.74■■■□□ 2.67
PTPRA-207ENST00000431048 UTRNP46939 3433 aa31.71■■■□□ 2.67
PTPRA-207ENST00000431048 KTN1Q86UP2 1357 aaKnown RBP31.7■■■□□ 2.67
PTPRA-207ENST00000431048 USP31Q70CQ4 1352 aa31.68■■■□□ 2.66
PTPRA-207ENST00000431048 NHSQ6T4R5 1651 aa31.67■■■□□ 2.66
PTPRA-207ENST00000431048 ARXQ96QS3 562 aa31.66■■■□□ 2.66
PTPRA-207ENST00000431048 ERBB3P21860 1342 aa31.66■■■□□ 2.66
PTPRA-207ENST00000431048 MAP3K5Q99683 1374 aa31.66■■■□□ 2.66
PTPRA-207ENST00000431048 ACSBG1Q96GR2 724 aa31.65■■■□□ 2.66
PTPRA-207ENST00000431048 IL2RBP14784 551 aa31.64■■■□□ 2.66
PTPRA-207ENST00000431048 NLRP2Q9NX02 1062 aa31.63■■■□□ 2.65
PTPRA-207ENST00000431048 ROCK2O75116 1388 aaKnown RBP31.63■■■□□ 2.65
PTPRA-207ENST00000431048 PAPPAQ13219 1627 aa31.6■■■□□ 2.65
PTPRA-207ENST00000431048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.58■■■□□ 2.651e-6■■■□□ 17.3
PTPRA-207ENST00000431048 USP54Q70EL1 1684 aa31.57■■■□□ 2.65
PTPRA-207ENST00000431048 SBNO2Q9Y2G9 1366 aa31.57■■■□□ 2.64
PTPRA-207ENST00000431048 MON2Q7Z3U7 1717 aa31.57■■■□□ 2.64
PTPRA-207ENST00000431048 CHD4Q14839 1912 aa31.57■■■□□ 2.64
PTPRA-207ENST00000431048 ZNF827Q17R98 1081 aa31.56■■■□□ 2.64
PTPRA-207ENST00000431048 SLC16A10Q8TF71 515 aa31.56■■■□□ 2.64
PTPRA-207ENST00000431048 LRRC4BQ9NT99 713 aa31.56■■■□□ 2.64
PTPRA-207ENST00000431048 NME9Q86XW9 330 aa31.55■■■□□ 2.64
PTPRA-207ENST00000431048 ANKRD24Q8TF21 1146 aa31.55■■■□□ 2.64
PTPRA-207ENST00000431048 SIN3AQ96ST3 1273 aa31.54■■■□□ 2.64
PTPRA-207ENST00000431048 AKT1S1Q96B36 256 aa31.53■■■□□ 2.64
PTPRA-207ENST00000431048 CD163L1Q9NR16 1453 aa31.52■■■□□ 2.64
PTPRA-207ENST00000431048 BTAF1O14981 1849 aa31.52■■■□□ 2.64
PTPRA-207ENST00000431048 C1QTNF8P60827 252 aa31.52■■■□□ 2.64
PTPRA-207ENST00000431048 SLC27A3Q5K4L6 730 aa31.52■■■□□ 2.64
PTPRA-207ENST00000431048 HDGFL2Q7Z4V5 671 aaPredicted RBP31.49■■■□□ 2.63
PTPRA-207ENST00000431048 GPR162Q16538 588 aa31.47■■■□□ 2.63
PTPRA-207ENST00000431048 IP6K1Q92551 441 aa31.46■■■□□ 2.63
PTPRA-207ENST00000431048 EDC4Q6P2E9 1401 aaKnown RBP31.46■■■□□ 2.63
PTPRA-207ENST00000431048 LTN1O94822 1766 aa31.45■■■□□ 2.63
PTPRA-207ENST00000431048 SENP3-EIF4A1A0A087X0R7 540 aa31.45■■■□□ 2.63
PTPRA-207ENST00000431048 POLD1P28340 1107 aa31.45■■■□□ 2.63
PTPRA-207ENST00000431048 TMC1Q8TDI8 760 aa31.45■■■□□ 2.63
PTPRA-207ENST00000431048 SLC12A5Q9H2X9 1139 aa31.45■■■□□ 2.63
PTPRA-207ENST00000431048 KAT6BQ8WYB5 2073 aa31.44■■■□□ 2.62
PTPRA-207ENST00000431048 NEUROD1Q13562 356 aa31.44■■■□□ 2.62
PTPRA-207ENST00000431048 PUS7Q96PZ0 661 aaKnown RBP31.44■■■□□ 2.62
PTPRA-207ENST00000431048 QSER1Q2KHR3 1735 aa31.42■■■□□ 2.62
PTPRA-207ENST00000431048 DDX54Q8TDD1 881 aaKnown RBP31.42■■■□□ 2.62
PTPRA-207ENST00000431048 TERF2IPQ9NYB0 399 aa31.42■■■□□ 2.62
PTPRA-207ENST00000431048 PNPLA7Q6ZV29 1317 aa31.42■■■□□ 2.62
PTPRA-207ENST00000431048 COL24A1Q17RW2 1714 aa31.41■■■□□ 2.62
PTPRA-207ENST00000431048 CARD11Q9BXL7 1154 aa31.38■■■□□ 2.61
PTPRA-207ENST00000431048 TFCP2L1Q9NZI6 479 aa31.38■■■□□ 2.61
PTPRA-207ENST00000431048 ANKRD36BQ8N2N9 1353 aa31.36■■■□□ 2.61
PTPRA-207ENST00000431048 PRIM1P49642 420 aaKnown RBP31.36■■■□□ 2.61
PTPRA-207ENST00000431048 A0A1W2PP64 1363 aa31.35■■■□□ 2.61
PTPRA-207ENST00000431048 FAM208AQ9UK61 1670 aaKnown RBP31.33■■■□□ 2.61
PTPRA-207ENST00000431048 KLHL34Q8N239 644 aa31.33■■■□□ 2.61
PTPRA-207ENST00000431048 LTV1Q96GA3 475 aaPredicted RBP31.32■■■□□ 2.6
PTPRA-207ENST00000431048 GIGYF1O75420 1035 aaPredicted RBP31.31■■■□□ 2.6
PTPRA-207ENST00000431048 SYTL4Q96C24 671 aaPredicted RBP31.31■■■□□ 2.6
PTPRA-207ENST00000431048 NSD2O96028 1365 aa31.3■■■□□ 2.6
PTPRA-207ENST00000431048 GOLGB1Q14789 3259 aaKnown RBP31.3■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms