RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 PEAK1Q9H792 1746 aa23.14■■□□□ 1.3
TTC28-202ENST00000431039 USP47Q96K76 1375 aa23.14■■□□□ 1.29
TTC28-202ENST00000431039 HSPA5P11021 654 aaKnown RBP23.13■■□□□ 1.29
TTC28-202ENST00000431039 AATKQ6ZMQ8 1374 aa23.13■■□□□ 1.29
TTC28-202ENST00000431039 OVOS2A0A0G2JMS6 1433 aa23.1■■□□□ 1.29
TTC28-202ENST00000431039 OVOS2A0A0J9YW53 1432 aa23.1■■□□□ 1.29
TTC28-202ENST00000431039 OVOS2Q6IE36 1432 aa23.1■■□□□ 1.29
TTC28-202ENST00000431039 TOM1L2Q6ZVM7 507 aa23.1■■□□□ 1.29
TTC28-202ENST00000431039 SOX12O15370 315 aa23.09■■□□□ 1.29
TTC28-202ENST00000431039 CPSF1Q10570 1443 aaKnown RBP23.08■■□□□ 1.29
TTC28-202ENST00000431039 NBPF14Q5TI25 921 aa23.08■■□□□ 1.29
TTC28-202ENST00000431039 RGPD3A6NKT7 1758 aaPredicted RBP23.08■■□□□ 1.29
TTC28-202ENST00000431039 RGPD4Q7Z3J3 1758 aa23.08■■□□□ 1.29
TTC28-202ENST00000431039 TTC21BQ7Z4L5 1316 aa23.08■■□□□ 1.28
TTC28-202ENST00000431039 AXIN2Q9Y2T1 843 aa23.07■■□□□ 1.28
TTC28-202ENST00000431039 MON2Q7Z3U7 1717 aa23.07■■□□□ 1.28
TTC28-202ENST00000431039 ST20-MTHFSA0A0A6YYL1 179 aa23.06■■□□□ 1.28
TTC28-202ENST00000431039 ZNF316A6NFI3 1004 aaPredicted RBP23.06■■□□□ 1.28
TTC28-202ENST00000431039 DDB1Q16531 1140 aa23.06■■□□□ 1.28
TTC28-202ENST00000431039 WDR17Q8IZU2 1322 aa23.06■■□□□ 1.28
TTC28-202ENST00000431039 C11orf95C9JLR9 678 aaPredicted RBP23.03■■□□□ 1.28
TTC28-202ENST00000431039 ARHGEF25Q86VW2 580 aa23.03■■□□□ 1.28
TTC28-202ENST00000431039 ZNF692Q9BU19 519 aaPredicted RBP23.03■■□□□ 1.28
TTC28-202ENST00000431039 NFAT5O94916 1531 aa23.03■■□□□ 1.28
TTC28-202ENST00000431039 KCNH5Q8NCM2 988 aa23.02■■□□□ 1.28
TTC28-202ENST00000431039 TTC21AQ8NDW8 1320 aa23.02■■□□□ 1.28
TTC28-202ENST00000431039 KTN1Q86UP2 1357 aaKnown RBP23.01■■□□□ 1.27
TTC28-202ENST00000431039 CSB-PGBD3P0DP91 1061 aa23.01■■□□□ 1.27
TTC28-202ENST00000431039 PTF1AQ7RTS3 328 aa23.01■■□□□ 1.27
TTC28-202ENST00000431039 SLC24A1O60721 1099 aa23■■□□□ 1.27
TTC28-202ENST00000431039 LTN1O94822 1766 aa22.99■■□□□ 1.27
TTC28-202ENST00000431039 MARCH10Q8NA82 808 aaPredicted RBP22.99■■□□□ 1.27
TTC28-202ENST00000431039 TESK2Q96S53 571 aa22.99■■□□□ 1.27
TTC28-202ENST00000431039 CDCA7Q9BWT1 371 aaPredicted RBP22.97■■□□□ 1.27
TTC28-202ENST00000431039 CARD10Q9BWT7 1032 aa22.97■■□□□ 1.27
TTC28-202ENST00000431039 USP54Q70EL1 1684 aa22.97■■□□□ 1.27
TTC28-202ENST00000431039 CASZ1Q86V15 1759 aa22.96■■□□□ 1.27
TTC28-202ENST00000431039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.96■■□□□ 1.27
TTC28-202ENST00000431039 BCL11BQ9C0K0 894 aaPredicted RBP22.96■■□□□ 1.27
TTC28-202ENST00000431039 PLSCR1O15162 318 aa22.95■■□□□ 1.26
TTC28-202ENST00000431039 SPON1Q9HCB6 807 aa22.95■■□□□ 1.26
TTC28-202ENST00000431039 ANO8Q9HCE9 1232 aaPredicted RBP22.95■■□□□ 1.26
TTC28-202ENST00000431039 PPP1R1BQ9UD71 204 aaPredicted RBP22.95■■□□□ 1.26
TTC28-202ENST00000431039 SBNO2Q9Y2G9 1366 aa22.95■■□□□ 1.26
TTC28-202ENST00000431039 ABCC6O95255 1503 aa22.94■■□□□ 1.26
TTC28-202ENST00000431039 KAT6BQ8WYB5 2073 aa22.93■■□□□ 1.26
TTC28-202ENST00000431039 KCNQ2O43526 872 aa22.93■■□□□ 1.26
TTC28-202ENST00000431039 CD163L1Q9NR16 1453 aa22.92■■□□□ 1.26
TTC28-202ENST00000431039 BCL9O00512 1426 aa22.91■■□□□ 1.26
TTC28-202ENST00000431039 CCDC7Q96M83 1385 aa22.91■■□□□ 1.26
TTC28-202ENST00000431039 EXOC5O00471 708 aa22.91■■□□□ 1.26
TTC28-202ENST00000431039 TMF1P82094 1093 aa22.91■■□□□ 1.26
TTC28-202ENST00000431039 NME9Q86XW9 330 aa22.91■■□□□ 1.26
TTC28-202ENST00000431039 TMC1Q8TDI8 760 aa22.91■■□□□ 1.26
TTC28-202ENST00000431039 TNS2Q63HR2 1409 aa22.91■■□□□ 1.26
TTC28-202ENST00000431039 NHSQ6T4R5 1651 aa22.9■■□□□ 1.26
TTC28-202ENST00000431039 USP31Q70CQ4 1352 aa22.89■■□□□ 1.26
TTC28-202ENST00000431039 PROM2Q8N271 834 aa22.89■■□□□ 1.25
TTC28-202ENST00000431039 PDGFDQ9GZP0 370 aaPredicted RBP22.88■■□□□ 1.25
TTC28-202ENST00000431039 CDCA8Q53HL2 280 aa22.87■■□□□ 1.25
TTC28-202ENST00000431039 ERBB3P21860 1342 aa22.86■■□□□ 1.25
TTC28-202ENST00000431039 HDGFL2Q7Z4V5 671 aaPredicted RBP22.86■■□□□ 1.25
TTC28-202ENST00000431039 SLC12A5Q9H2X9 1139 aa22.86■■□□□ 1.25
TTC28-202ENST00000431039 NLRP2Q9NX02 1062 aa22.86■■□□□ 1.25
TTC28-202ENST00000431039 MYOM1P52179 1685 aa22.86■■□□□ 1.25
TTC28-202ENST00000431039 NINLQ9Y2I6 1382 aa22.86■■□□□ 1.25
TTC28-202ENST00000431039 WASHC2AQ641Q2 1341 aa22.85■■□□□ 1.25
TTC28-202ENST00000431039 TXNRD1Q16881 649 aa22.85■■□□□ 1.25
TTC28-202ENST00000431039 BTAF1O14981 1849 aa22.85■■□□□ 1.25
TTC28-202ENST00000431039 KIF7Q2M1P5 1343 aa22.84■■□□□ 1.25
TTC28-202ENST00000431039 ZBTB7AO95365 584 aa22.84■■□□□ 1.25
TTC28-202ENST00000431039 ACSBG1Q96GR2 724 aa22.84■■□□□ 1.25
TTC28-202ENST00000431039 PUS7Q96PZ0 661 aaKnown RBP22.84■■□□□ 1.25
TTC28-202ENST00000431039 EDC4Q6P2E9 1401 aaKnown RBP22.83■■□□□ 1.25
TTC28-202ENST00000431039 STK32BQ9NY57 414 aa22.83■■□□□ 1.25
TTC28-202ENST00000431039 A0A1W2PP64 1363 aa22.83■■□□□ 1.25
TTC28-202ENST00000431039 YY1P25490 414 aa22.82■■□□□ 1.24
TTC28-202ENST00000431039 ANKRD24Q8TF21 1146 aa22.82■■□□□ 1.24
TTC28-202ENST00000431039 IL2RBP14784 551 aa22.8■■□□□ 1.24
TTC28-202ENST00000431039 FAM208AQ9UK61 1670 aaKnown RBP22.79■■□□□ 1.24
TTC28-202ENST00000431039 DCAF8L1A6NGE4 600 aa22.79■■□□□ 1.24
TTC28-202ENST00000431039 SLC15A2Q16348 729 aa22.79■■□□□ 1.24
TTC28-202ENST00000431039 TERF2IPQ9NYB0 399 aa22.79■■□□□ 1.24
TTC28-202ENST00000431039 ATF5Q9Y2D1 282 aaPredicted RBP22.79■■□□□ 1.24
TTC28-202ENST00000431039 RGPD2P0DJD1 1756 aa22.77■■□□□ 1.24
TTC28-202ENST00000431039 PAPPAQ13219 1627 aa22.77■■□□□ 1.24
TTC28-202ENST00000431039 PTGER2P43116 358 aa22.75■■□□□ 1.23
TTC28-202ENST00000431039 LTV1Q96GA3 475 aaPredicted RBP22.75■■□□□ 1.23
TTC28-202ENST00000431039 POLR3GLQ9BT43 218 aa22.74■■□□□ 1.23
TTC28-202ENST00000431039 DDX10Q13206 875 aaKnown RBP22.72■■□□□ 1.23
TTC28-202ENST00000431039 IP6K1Q92551 441 aa22.72■■□□□ 1.23
TTC28-202ENST00000431039 DOT1LQ8TEK3 1739 aa22.71■■□□□ 1.23
TTC28-202ENST00000431039 DDX54Q8TDD1 881 aaKnown RBP22.7■■□□□ 1.22
TTC28-202ENST00000431039 MTFR1LQ9H019 292 aa22.7■■□□□ 1.22
TTC28-202ENST00000431039 SHANK3Q9BYB0 1731 aa22.7■■□□□ 1.22
TTC28-202ENST00000431039 FBLN1P23142 703 aa22.68■■□□□ 1.22
TTC28-202ENST00000431039 COG3Q96JB2 828 aa22.68■■□□□ 1.22
TTC28-202ENST00000431039 FHDC1Q9C0D6 1143 aaPredicted RBP22.68■■□□□ 1.22
TTC28-202ENST00000431039 TUBGCP6Q96RT7 1819 aa22.68■■□□□ 1.22
TTC28-202ENST00000431039 MAP3K19Q56UN5 1328 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms