RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 PSME1Q06323 249 aa18.65■□□□□ 0.58
CALD1-207ENST00000430085 RIPK4P57078 832 aa18.64■□□□□ 0.57
CALD1-207ENST00000430085 ORAI2Q96SN7 254 aa18.64■□□□□ 0.57
CALD1-207ENST00000430085 USP54Q70EL1 1684 aa18.63■□□□□ 0.57
CALD1-207ENST00000430085 MYH16Q9H6N6 1097 aa18.63■□□□□ 0.57
CALD1-207ENST00000430085 PEAK1Q9H792 1746 aa18.63■□□□□ 0.57
CALD1-207ENST00000430085 EIF4A2Q14240 407 aaKnown RBP18.62■□□□□ 0.57
CALD1-207ENST00000430085 NUTM2GQ5VZR2 741 aa18.62■□□□□ 0.57
CALD1-207ENST00000430085 MAP3K19Q56UN5 1328 aa18.62■□□□□ 0.57
CALD1-207ENST00000430085 SBNO1A3KN83 1393 aa18.62■□□□□ 0.57
CALD1-207ENST00000430085 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.62■□□□□ 0.57
CALD1-207ENST00000430085 FLT4P35916 1363 aa18.62■□□□□ 0.57
CALD1-207ENST00000430085 AMPHP49418 695 aa18.61■□□□□ 0.57
CALD1-207ENST00000430085 HSP90AB2PQ58FF8 381 aa18.61■□□□□ 0.57
CALD1-207ENST00000430085 BRINP3Q76B58 766 aa18.61■□□□□ 0.57
CALD1-207ENST00000430085 TRIM35Q9UPQ4 493 aa18.61■□□□□ 0.57
CALD1-207ENST00000430085 PLIN1O60240 522 aa18.61■□□□□ 0.57
CALD1-207ENST00000430085 B4GALNT3Q6L9W6 998 aa18.6■□□□□ 0.57
CALD1-207ENST00000430085 MARF1Q9Y4F3 1742 aaKnown RBP18.6■□□□□ 0.57
CALD1-207ENST00000430085 KIF1AQ12756 1690 aa18.59■□□□□ 0.57
CALD1-207ENST00000430085 NFE2L2Q16236 605 aa18.59■□□□□ 0.57
CALD1-207ENST00000430085 FOXO3O43524 673 aa18.58■□□□□ 0.56
CALD1-207ENST00000430085 FBXO41Q8TF61 875 aa18.58■□□□□ 0.56
CALD1-207ENST00000430085 PHACTR3Q96KR7 559 aa18.58■□□□□ 0.56
CALD1-207ENST00000430085 NHSL1Q5SYE7 1610 aa18.57■□□□□ 0.56
CALD1-207ENST00000430085 KIF24Q5T7B8 1368 aa18.57■□□□□ 0.56
CALD1-207ENST00000430085 IL16Q14005 1332 aa18.57■□□□□ 0.56
CALD1-207ENST00000430085 SULT6B1Q6IMI4 303 aa18.57■□□□□ 0.56
CALD1-207ENST00000430085 EXOC6Q8TAG9 804 aa18.57■□□□□ 0.56
CALD1-207ENST00000430085 DDX17Q92841 729 aaKnown RBP18.57■□□□□ 0.56
CALD1-207ENST00000430085 CCDC136Q96JN2 1154 aa18.57■□□□□ 0.56
CALD1-207ENST00000430085 PHLPP1O60346 1717 aa18.55■□□□□ 0.56
CALD1-207ENST00000430085 RGPD1P0DJD0 1748 aa18.54■□□□□ 0.56
CALD1-207ENST00000430085 ARHGEF10O15013 1369 aa18.54■□□□□ 0.56
CALD1-207ENST00000430085 XPCQ01831 940 aaPredicted RBP18.54■□□□□ 0.56
CALD1-207ENST00000430085 LMOD3Q0VAK6 560 aa18.54■□□□□ 0.56
CALD1-207ENST00000430085 AHDC1Q5TGY3 1603 aaPredicted RBP18.54■□□□□ 0.56
CALD1-207ENST00000430085 FANCIQ9NVI1 1328 aa18.53■□□□□ 0.56
CALD1-207ENST00000430085 CALD1Q05682 793 aaKnown RBP18.53■□□□□ 0.56
CALD1-207ENST00000430085 AEBP1Q8IUX7 1158 aa18.53■□□□□ 0.56
CALD1-207ENST00000430085 KCNH5Q8NCM2 988 aa18.53■□□□□ 0.56
CALD1-207ENST00000430085 BCAR3O75815 825 aa18.53■□□□□ 0.56
CALD1-207ENST00000430085 HOXC9P31274 260 aa18.53■□□□□ 0.56
CALD1-207ENST00000430085 KRT28Q7Z3Y7 464 aa18.52■□□□□ 0.56
CALD1-207ENST00000430085 TSR2Q969E8 191 aaKnown RBP18.52■□□□□ 0.56
CALD1-207ENST00000430085 CRBNQ96SW2 442 aa18.52■□□□□ 0.56
CALD1-207ENST00000430085 RTL1A6NKG5 1358 aa18.52■□□□□ 0.55
CALD1-207ENST00000430085 CT47B1P0C2W7 299 aaPredicted RBP18.51■□□□□ 0.55
CALD1-207ENST00000430085 LMOD2Q6P5Q4 547 aa18.51■□□□□ 0.55
CALD1-207ENST00000430085 LTN1O94822 1766 aa18.5■□□□□ 0.55
CALD1-207ENST00000430085 NFAT5O94916 1531 aa18.5■□□□□ 0.55
CALD1-207ENST00000430085 TRPM3Q9HCF6 1732 aaPredicted RBP18.5■□□□□ 0.55
CALD1-207ENST00000430085 CANXP27824 592 aaKnown RBP18.5■□□□□ 0.55
CALD1-207ENST00000430085 C20orf194Q5TEA3 1177 aa18.5■□□□□ 0.55
CALD1-207ENST00000430085 PXDNQ92626 1479 aa18.5■□□□□ 0.55
CALD1-207ENST00000430085 NPHP3Q7Z494 1330 aa18.5■□□□□ 0.55
CALD1-207ENST00000430085 COL16A1Q07092 1604 aaPredicted RBP18.5■□□□□ 0.55
CALD1-207ENST00000430085 HSPA1LP34931 641 aa18.49■□□□□ 0.55
CALD1-207ENST00000430085 RARSP54136 660 aaKnown RBP18.49■□□□□ 0.55
CALD1-207ENST00000430085 DLG5Q8TDM6 1919 aa18.49■□□□□ 0.55
CALD1-207ENST00000430085 IGSF1Q8N6C5 1336 aa18.48■□□□□ 0.55
CALD1-207ENST00000430085 EXOSC9Q06265 439 aaKnown RBP18.48■□□□□ 0.55
CALD1-207ENST00000430085 EYA1Q99502 592 aa18.48■□□□□ 0.55
CALD1-207ENST00000430085 LAS1LQ9Y4W2 734 aaKnown RBP18.47■□□□□ 0.55
CALD1-207ENST00000430085 KDRP35968 1356 aa18.47■□□□□ 0.55
CALD1-207ENST00000430085 SOS2Q07890 1332 aaPredicted RBP18.46■□□□□ 0.55
CALD1-207ENST00000430085 GNAI1P63096 354 aa18.46■□□□□ 0.55
CALD1-207ENST00000430085 IP6K1Q92551 441 aa18.46■□□□□ 0.55
CALD1-207ENST00000430085 LTV1Q96GA3 475 aaPredicted RBP18.46■□□□□ 0.55
CALD1-207ENST00000430085 THUMPD2Q9BTF0 503 aaKnown RBP18.46■□□□□ 0.55
CALD1-207ENST00000430085 SLIT3O75094 1523 aa18.46■□□□□ 0.55
CALD1-207ENST00000430085 ZBTB7CA1YPR0 619 aa18.45■□□□□ 0.54
CALD1-207ENST00000430085 IFT57Q9NWB7 429 aa18.45■□□□□ 0.54
CALD1-207ENST00000430085 GCP02774 474 aa18.45■□□□□ 0.54
CALD1-207ENST00000430085 FRAT1Q92837 279 aaPredicted RBP18.45■□□□□ 0.54
CALD1-207ENST00000430085 PLEKHG5O94827 1062 aa18.44■□□□□ 0.54
CALD1-207ENST00000430085 PDE3AQ14432 1141 aa18.44■□□□□ 0.54
CALD1-207ENST00000430085 PHRF1Q9P1Y6 1649 aaKnown RBP18.43■□□□□ 0.54
CALD1-207ENST00000430085 USP19O94966 1318 aa18.43■□□□□ 0.54
CALD1-207ENST00000430085 FAM83GA6ND36 823 aa18.43■□□□□ 0.54
CALD1-207ENST00000430085 ILDR1Q86SU0 546 aaPredicted RBP18.43■□□□□ 0.54
CALD1-207ENST00000430085 BCL2L13Q9BXK5 485 aa18.43■□□□□ 0.54
CALD1-207ENST00000430085 ALS2Q96Q42 1657 aa18.42■□□□□ 0.54
CALD1-207ENST00000430085 CFAP44Q96MT7 982 aa18.41■□□□□ 0.54
CALD1-207ENST00000430085 DCTN1Q14203 1278 aa18.41■□□□□ 0.54
CALD1-207ENST00000430085 ARHGEF25Q86VW2 580 aa18.41■□□□□ 0.54
CALD1-207ENST00000430085 GAS2L2Q8NHY3 880 aa18.41■□□□□ 0.54
CALD1-207ENST00000430085 SMC4Q9NTJ3 1288 aa18.41■□□□□ 0.54
CALD1-207ENST00000430085 ZNF853P0CG23 659 aa18.4■□□□□ 0.54
CALD1-207ENST00000430085 LRRC59Q96AG4 307 aaKnown RBP18.4■□□□□ 0.54
CALD1-207ENST00000430085 TNS3Q68CZ2 1445 aa18.39■□□□□ 0.54
CALD1-207ENST00000430085 MTHFSDQ2M296 383 aaKnown RBP18.39■□□□□ 0.53
CALD1-207ENST00000430085 MBIPQ9NS73 344 aa18.39■□□□□ 0.53
CALD1-207ENST00000430085 SPATA31A3Q5VYP0 1347 aa18.39■□□□□ 0.53
CALD1-207ENST00000430085 RTF1Q92541 710 aaKnown RBP18.39■□□□□ 0.53
CALD1-207ENST00000430085 ZNF428Q96B54 188 aa18.38■□□□□ 0.53
CALD1-207ENST00000430085 TSHZ2Q9NRE2 1034 aa18.38■□□□□ 0.53
CALD1-207ENST00000430085 MCM10Q7L590 875 aa18.37■□□□□ 0.53
CALD1-207ENST00000430085 ZKSCAN2Q63HK3 967 aa18.37■□□□□ 0.53
CALD1-207ENST00000430085 PANK1Q8TE04 598 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms