RNA–Protein interactions for RNA: ENST00000429976.5

TRANK1-201, Transcript of tetratricopeptide repeat and ankyrin repeat containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRANK1, Length 10,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1-201ENST00000429976 SPATA32Q96LK8 384 aa11.74□□□□□ -0.53
TRANK1-201ENST00000429976 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
TRANK1-201ENST00000429976 KIF21BO75037 1637 aa11.74□□□□□ -0.53
TRANK1-201ENST00000429976 PTPRGP23470 1445 aa11.74□□□□□ -0.53
TRANK1-201ENST00000429976 TMX1Q9H3N1 280 aa11.74□□□□□ -0.53
TRANK1-201ENST00000429976 KIF6Q6ZMV9 814 aa11.74□□□□□ -0.53
TRANK1-201ENST00000429976 LARP1BQ659C4 914 aaKnown RBP11.74□□□□□ -0.53
TRANK1-201ENST00000429976 PDRG1Q9NUG6 133 aa11.73□□□□□ -0.53
TRANK1-201ENST00000429976 CWC27Q6UX04 472 aaKnown RBP11.73□□□□□ -0.53
TRANK1-201ENST00000429976 LRRCC1Q9C099 1032 aa11.73□□□□□ -0.53
TRANK1-201ENST00000429976 CNNM1Q9NRU3 951 aa11.73□□□□□ -0.53
TRANK1-201ENST00000429976 WDR33Q9C0J8 1336 aaKnown RBP11.73□□□□□ -0.53
TRANK1-201ENST00000429976 NLRP6P59044 892 aa11.73□□□□□ -0.53
TRANK1-201ENST00000429976 AACSQ86V21 672 aa11.73□□□□□ -0.53
TRANK1-201ENST00000429976 GCC1Q96CN9 775 aa11.73□□□□□ -0.53
TRANK1-201ENST00000429976 CCDC69A6NI79 296 aa11.73□□□□□ -0.53
TRANK1-201ENST00000429976 HIP1O00291 1037 aa11.73□□□□□ -0.53
TRANK1-201ENST00000429976 ERLIN2O94905 339 aa11.73□□□□□ -0.53
TRANK1-201ENST00000429976 JAKMIP1Q96N16 626 aaKnown RBP11.73□□□□□ -0.53
TRANK1-201ENST00000429976 TAF3Q5VWG9 929 aa11.72□□□□□ -0.53
TRANK1-201ENST00000429976 GIMAP7Q8NHV1 300 aa11.72□□□□□ -0.53
TRANK1-201ENST00000429976 SMARCA4P51532 1647 aa11.72□□□□□ -0.53
TRANK1-201ENST00000429976 NF2P35240 595 aa11.72□□□□□ -0.53
TRANK1-201ENST00000429976 CHD1LQ86WJ1 897 aa11.72□□□□□ -0.53
TRANK1-201ENST00000429976 MCM2P49736 904 aa11.72□□□□□ -0.53
TRANK1-201ENST00000429976 MYL6BP14649 208 aa11.72□□□□□ -0.53
TRANK1-201ENST00000429976 DDX11Q96FC9 970 aa11.72□□□□□ -0.53
TRANK1-201ENST00000429976 ARHGAP5Q13017 1502 aa11.72□□□□□ -0.53
TRANK1-201ENST00000429976 FILIP1Q7Z7B0 1213 aa11.72□□□□□ -0.53
TRANK1-201ENST00000429976 CBX1P83916 185 aa11.71□□□□□ -0.53
TRANK1-201ENST00000429976 LRRFIP2Q9Y608 721 aaKnown RBP11.71□□□□□ -0.53
TRANK1-201ENST00000429976 C11orf95C9JLR9 678 aaPredicted RBP11.71□□□□□ -0.53
TRANK1-201ENST00000429976 SLC3A2P08195 630 aaKnown RBP11.71□□□□□ -0.53
TRANK1-201ENST00000429976 KRT85P78386 507 aa11.71□□□□□ -0.53
TRANK1-201ENST00000429976 NBPF1Q3BBV0 1214 aa11.71□□□□□ -0.53
TRANK1-201ENST00000429976 LRRC9Q6ZRR7 1453 aa11.71□□□□□ -0.53
TRANK1-201ENST00000429976 ERC1Q8IUD2 1116 aa11.71□□□□□ -0.54
TRANK1-201ENST00000429976 NUP62CLQ9H1M0 184 aa11.71□□□□□ -0.54
TRANK1-201ENST00000429976 CASTP20810 708 aaKnown RBP11.7□□□□□ -0.54
TRANK1-201ENST00000429976 CCDC184Q52MB2 194 aa11.7□□□□□ -0.54
TRANK1-201ENST00000429976 ABTB2Q8N961 1025 aa11.7□□□□□ -0.54
TRANK1-201ENST00000429976 NUTM1Q86Y26 1132 aa11.7□□□□□ -0.54
TRANK1-201ENST00000429976 NCOA2Q15596 1464 aa11.7□□□□□ -0.54
TRANK1-201ENST00000429976 ESPNB1AK53 854 aa11.7□□□□□ -0.54
TRANK1-201ENST00000429976 ERLIN1O75477 346 aa11.7□□□□□ -0.54
TRANK1-201ENST00000429976 CCDC158Q5M9N0 1113 aa11.7□□□□□ -0.54
TRANK1-201ENST00000429976 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.7□□□□□ -0.541e-6■■■■□ 25.1
TRANK1-201ENST00000429976 SSBP05455 408 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRANK1-201ENST00000429976 MVPQ14764 893 aaKnown RBP11.7□□□□□ -0.54
TRANK1-201ENST00000429976 MCM4P33991 863 aa11.7□□□□□ -0.54
TRANK1-201ENST00000429976 FKBP4Q02790 459 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRANK1-201ENST00000429976 CFAP70Q5T0N1 1121 aa11.7□□□□□ -0.54
TRANK1-201ENST00000429976 SMARCA5O60264 1052 aaPredicted RBP11.7□□□□□ -0.54
TRANK1-201ENST00000429976 ZFP91Q96JP5 570 aaPredicted RBP11.7□□□□□ -0.54
TRANK1-201ENST00000429976 CBFA2T2O43439 604 aa11.69□□□□□ -0.54
TRANK1-201ENST00000429976 JMYQ8N9B5 988 aa11.69□□□□□ -0.54
TRANK1-201ENST00000429976 TRERF1Q96PN7 1200 aa11.69□□□□□ -0.54
TRANK1-201ENST00000429976 PDCL2Q8N4E4 241 aa11.69□□□□□ -0.54
TRANK1-201ENST00000429976 DDX54Q8TDD1 881 aaKnown RBP11.69□□□□□ -0.54
TRANK1-201ENST00000429976 PDCL3Q9H2J4 239 aa11.69□□□□□ -0.54
TRANK1-201ENST00000429976 SMG6Q86US8 1419 aaKnown RBP11.69□□□□□ -0.54
TRANK1-201ENST00000429976 ANKRD50Q9ULJ7 1429 aa11.69□□□□□ -0.54
TRANK1-201ENST00000429976 PIP4K2AP48426 406 aaPredicted RBP11.69□□□□□ -0.54
TRANK1-201ENST00000429976 STIM1Q13586 685 aa11.69□□□□□ -0.54
TRANK1-201ENST00000429976 GOLGA6L10A0A0M3HER8 536 aa11.69□□□□□ -0.54
TRANK1-201ENST00000429976 XPCQ01831 940 aaPredicted RBP11.69□□□□□ -0.54
TRANK1-201ENST00000429976 UPF3BQ9BZI7 483 aaKnown RBP11.69□□□□□ -0.54
TRANK1-201ENST00000429976 IL1RAPL2Q9NP60 686 aa11.69□□□□□ -0.54
TRANK1-201ENST00000429976 STRN4Q9NRL3 753 aa11.69□□□□□ -0.54
TRANK1-201ENST00000429976 CADPSQ9ULU8 1353 aa11.69□□□□□ -0.54
TRANK1-201ENST00000429976 FANCD2Q9BXW9 1451 aa11.69□□□□□ -0.54
TRANK1-201ENST00000429976 RAD54L2Q9Y4B4 1467 aa11.69□□□□□ -0.54
TRANK1-201ENST00000429976 EIF3JO75822 258 aaKnown RBP11.69□□□□□ -0.54
TRANK1-201ENST00000429976 HDGFL1Q5TGJ6 251 aa11.69□□□□□ -0.54
TRANK1-201ENST00000429976 KIAA1328Q86T90 577 aa11.69□□□□□ -0.54
TRANK1-201ENST00000429976 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.69□□□□□ -0.54
TRANK1-201ENST00000429976 WDR97A6NE52 1622 aa11.68□□□□□ -0.54
TRANK1-201ENST00000429976 TRIM22Q8IYM9 498 aa11.68□□□□□ -0.54
TRANK1-201ENST00000429976 CEP57L1Q8IYX8 460 aa11.68□□□□□ -0.54
TRANK1-201ENST00000429976 PUS7Q96PZ0 661 aaKnown RBP11.68□□□□□ -0.54
TRANK1-201ENST00000429976 DACH1Q9UI36 760 aa11.68□□□□□ -0.54
TRANK1-201ENST00000429976 ATF3P18847 181 aa11.68□□□□□ -0.54
TRANK1-201ENST00000429976 FERMT3Q86UX7 667 aa11.68□□□□□ -0.54
TRANK1-201ENST00000429976 GAS2L2Q8NHY3 880 aa11.68□□□□□ -0.54
TRANK1-201ENST00000429976 CCDC85AQ96PX6 553 aaPredicted RBP11.68□□□□□ -0.54
TRANK1-201ENST00000429976 INCENPQ9NQS7 918 aa11.68□□□□□ -0.54
TRANK1-201ENST00000429976 PDE3AQ14432 1141 aa11.68□□□□□ -0.54
TRANK1-201ENST00000429976 GPATCH11Q8N954 259 aa11.68□□□□□ -0.54
TRANK1-201ENST00000429976 SULT6B1Q6IMI4 303 aa11.68□□□□□ -0.54
TRANK1-201ENST00000429976 PRAM1Q96QH2 718 aa11.68□□□□□ -0.54
TRANK1-201ENST00000429976 TNNT1P13805 278 aa11.67□□□□□ -0.54
TRANK1-201ENST00000429976 ANKRD1Q15327 319 aa11.67□□□□□ -0.54
TRANK1-201ENST00000429976 RRBP1Q9P2E9 1410 aaKnown RBP11.67□□□□□ -0.54
TRANK1-201ENST00000429976 FYCO1Q9BQS8 1478 aa11.67□□□□□ -0.54
TRANK1-201ENST00000429976 PPM1FP49593 454 aaPredicted RBP11.67□□□□□ -0.54
TRANK1-201ENST00000429976 RRP9O43818 475 aaKnown RBP11.67□□□□□ -0.54
TRANK1-201ENST00000429976 ESCO1Q5FWF5 840 aa11.67□□□□□ -0.54
TRANK1-201ENST00000429976 MIS18AQ9NYP9 233 aa11.67□□□□□ -0.54
TRANK1-201ENST00000429976 CCT4P50991 539 aaKnown RBP11.67□□□□□ -0.54
TRANK1-201ENST00000429976 SSR1P43307 286 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms