RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 ZBTB7CA1YPR0 619 aa21.23■□□□□ 0.99
MSH5-208ENST00000429846 USP54Q70EL1 1684 aa21.23■□□□□ 0.99
MSH5-208ENST00000429846 NUP188Q5SRE5 1749 aa21.23■□□□□ 0.99
MSH5-208ENST00000429846 RGPD3A6NKT7 1758 aaPredicted RBP21.23■□□□□ 0.99
MSH5-208ENST00000429846 RGPD4Q7Z3J3 1758 aa21.23■□□□□ 0.99
MSH5-208ENST00000429846 KTN1Q86UP2 1357 aaKnown RBP21.23■□□□□ 0.99
MSH5-208ENST00000429846 WDR17Q8IZU2 1322 aa21.22■□□□□ 0.99
MSH5-208ENST00000429846 RGPD5Q99666 1765 aa21.21■□□□□ 0.99
MSH5-208ENST00000429846 NFAT5O94916 1531 aa21.21■□□□□ 0.99
MSH5-208ENST00000429846 R3HDM1Q15032 1099 aaKnown RBP21.2■□□□□ 0.98
MSH5-208ENST00000429846 TOM1L2Q6ZVM7 507 aa21.2■□□□□ 0.98
MSH5-208ENST00000429846 ARHGEF25Q86VW2 580 aa21.2■□□□□ 0.98
MSH5-208ENST00000429846 SBF2Q86WG5 1849 aa21.2■□□□□ 0.98
MSH5-208ENST00000429846 CARD11Q9BXL7 1154 aa21.19■□□□□ 0.98
MSH5-208ENST00000429846 TONSLQ96HA7 1378 aa21.19■□□□□ 0.98
MSH5-208ENST00000429846 CDCA7Q9BWT1 371 aaPredicted RBP21.18■□□□□ 0.98
MSH5-208ENST00000429846 DDB1Q16531 1140 aa21.17■□□□□ 0.98
MSH5-208ENST00000429846 AXIN2Q9Y2T1 843 aa21.17■□□□□ 0.98
MSH5-208ENST00000429846 USP31Q70CQ4 1352 aa21.16■□□□□ 0.98
MSH5-208ENST00000429846 CD163L1Q9NR16 1453 aa21.15■□□□□ 0.98
MSH5-208ENST00000429846 BCL9O00512 1426 aa21.14■□□□□ 0.98
MSH5-208ENST00000429846 NBPF14Q5TI25 921 aa21.14■□□□□ 0.97
MSH5-208ENST00000429846 LTN1O94822 1766 aa21.13■□□□□ 0.97
MSH5-208ENST00000429846 CARD10Q9BWT7 1032 aa21.13■□□□□ 0.97
MSH5-208ENST00000429846 CCDC7Q96M83 1385 aa21.12■□□□□ 0.97
MSH5-208ENST00000429846 SOX12O15370 315 aa21.12■□□□□ 0.97
MSH5-208ENST00000429846 CSB-PGBD3P0DP91 1061 aa21.12■□□□□ 0.97
MSH5-208ENST00000429846 PUS7Q96PZ0 661 aaKnown RBP21.12■□□□□ 0.97
MSH5-208ENST00000429846 EDC4Q6P2E9 1401 aaKnown RBP21.12■□□□□ 0.97
MSH5-208ENST00000429846 HDGFL2Q7Z4V5 671 aaPredicted RBP21.11■□□□□ 0.97
MSH5-208ENST00000429846 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.1■□□□□ 0.97
MSH5-208ENST00000429846 PLSCR1O15162 318 aa21.09■□□□□ 0.97
MSH5-208ENST00000429846 TMC1Q8TDI8 760 aa21.09■□□□□ 0.97
MSH5-208ENST00000429846 NINLQ9Y2I6 1382 aa21.09■□□□□ 0.97
MSH5-208ENST00000429846 TNS2Q63HR2 1409 aa21.08■□□□□ 0.97
MSH5-208ENST00000429846 BCL11BQ9C0K0 894 aaPredicted RBP21.08■□□□□ 0.97
MSH5-208ENST00000429846 TERF2IPQ9NYB0 399 aa21.08■□□□□ 0.97
MSH5-208ENST00000429846 ERBB3P21860 1342 aa21.07■□□□□ 0.96
MSH5-208ENST00000429846 MARCH10Q8NA82 808 aaPredicted RBP21.07■□□□□ 0.96
MSH5-208ENST00000429846 A0A1W2PP64 1363 aa21.07■□□□□ 0.96
MSH5-208ENST00000429846 SLC24A1O60721 1099 aa21.06■□□□□ 0.96
MSH5-208ENST00000429846 NME9Q86XW9 330 aa21.06■□□□□ 0.96
MSH5-208ENST00000429846 SLC12A5Q9H2X9 1139 aa21.05■□□□□ 0.96
MSH5-208ENST00000429846 EXOC5O00471 708 aa21.04■□□□□ 0.96
MSH5-208ENST00000429846 FAM208AQ9UK61 1670 aaKnown RBP21.04■□□□□ 0.96
MSH5-208ENST00000429846 NHSQ6T4R5 1651 aa21.02■□□□□ 0.96
MSH5-208ENST00000429846 TESK2Q96S53 571 aa21.01■□□□□ 0.95
MSH5-208ENST00000429846 CASZ1Q86V15 1759 aa21■□□□□ 0.95
MSH5-208ENST00000429846 SPON1Q9HCB6 807 aa20.99■□□□□ 0.95
MSH5-208ENST00000429846 NLRP2Q9NX02 1062 aa20.99■□□□□ 0.95
MSH5-208ENST00000429846 ST20-MTHFSA0A0A6YYL1 179 aa20.98■□□□□ 0.95
MSH5-208ENST00000429846 IL2RBP14784 551 aa20.98■□□□□ 0.95
MSH5-208ENST00000429846 PTF1AQ7RTS3 328 aa20.98■□□□□ 0.95
MSH5-208ENST00000429846 ANKRD24Q8TF21 1146 aa20.97■□□□□ 0.95
MSH5-208ENST00000429846 KCNQ2O43526 872 aa20.96■□□□□ 0.95
MSH5-208ENST00000429846 ANO8Q9HCE9 1232 aaPredicted RBP20.96■□□□□ 0.95
MSH5-208ENST00000429846 TRIM26Q12899 539 aaPredicted RBP20.95■□□□□ 0.94
MSH5-208ENST00000429846 ANKRD36BQ8N2N9 1353 aa20.95■□□□□ 0.94
MSH5-208ENST00000429846 PROM2Q8N271 834 aa20.94■□□□□ 0.94
MSH5-208ENST00000429846 TXNRD1Q16881 649 aa20.93■□□□□ 0.94
MSH5-208ENST00000429846 IP6K1Q92551 441 aa20.93■□□□□ 0.94
MSH5-208ENST00000429846 COG3Q96JB2 828 aa20.93■□□□□ 0.94
MSH5-208ENST00000429846 PPP1R1BQ9UD71 204 aaPredicted RBP20.93■□□□□ 0.94
MSH5-208ENST00000429846 BTAF1O14981 1849 aa20.92■□□□□ 0.94
MSH5-208ENST00000429846 USP47Q96K76 1375 aa20.91■□□□□ 0.94
MSH5-208ENST00000429846 RTL1A6NKG5 1358 aa20.9■□□□□ 0.94
MSH5-208ENST00000429846 TMF1P82094 1093 aa20.9■□□□□ 0.94
MSH5-208ENST00000429846 STK32BQ9NY57 414 aa20.9■□□□□ 0.94
MSH5-208ENST00000429846 PAPPAQ13219 1627 aa20.89■□□□□ 0.94
MSH5-208ENST00000429846 KAT6BQ8WYB5 2073 aa20.89■□□□□ 0.93
MSH5-208ENST00000429846 MAP3K19Q56UN5 1328 aa20.88■□□□□ 0.93
MSH5-208ENST00000429846 SLC15A2Q16348 729 aa20.87■□□□□ 0.93
MSH5-208ENST00000429846 ACSBG1Q96GR2 724 aa20.87■□□□□ 0.93
MSH5-208ENST00000429846 KIF20BQ96Q89 1820 aa20.87■□□□□ 0.93
MSH5-208ENST00000429846 HOXC9P31274 260 aa20.86■□□□□ 0.93
MSH5-208ENST00000429846 AMPHP49418 695 aa20.86■□□□□ 0.93
MSH5-208ENST00000429846 CDCA8Q53HL2 280 aa20.86■□□□□ 0.93
MSH5-208ENST00000429846 RGPD2P0DJD1 1756 aa20.85■□□□□ 0.93
MSH5-208ENST00000429846 MYOM1P52179 1685 aa20.84■□□□□ 0.93
MSH5-208ENST00000429846 LTV1Q96GA3 475 aaPredicted RBP20.84■□□□□ 0.93
MSH5-208ENST00000429846 SHANK3Q9BYB0 1731 aa20.84■□□□□ 0.93
MSH5-208ENST00000429846 DOT1LQ8TEK3 1739 aa20.83■□□□□ 0.92
MSH5-208ENST00000429846 SMG6Q86US8 1419 aaKnown RBP20.82■□□□□ 0.92
MSH5-208ENST00000429846 DCAF8L1A6NGE4 600 aa20.82■□□□□ 0.92
MSH5-208ENST00000429846 PDGFDQ9GZP0 370 aaPredicted RBP20.82■□□□□ 0.92
MSH5-208ENST00000429846 QSER1Q2KHR3 1735 aa20.81■□□□□ 0.92
MSH5-208ENST00000429846 FYB1O15117 783 aa20.81■□□□□ 0.92
MSH5-208ENST00000429846 ZBTB7AO95365 584 aa20.81■□□□□ 0.92
MSH5-208ENST00000429846 TIMELESSQ9UNS1 1208 aa20.81■□□□□ 0.92
MSH5-208ENST00000429846 DDX54Q8TDD1 881 aaKnown RBP20.8■□□□□ 0.92
MSH5-208ENST00000429846 MTFR1LQ9H019 292 aa20.8■□□□□ 0.92
MSH5-208ENST00000429846 KIF24Q5T7B8 1368 aa20.8■□□□□ 0.92
MSH5-208ENST00000429846 MEGF6O75095 1541 aa20.79■□□□□ 0.92
MSH5-208ENST00000429846 PTGER2P43116 358 aa20.79■□□□□ 0.92
MSH5-208ENST00000429846 CGNL1Q0VF96 1302 aa20.78■□□□□ 0.92
MSH5-208ENST00000429846 SLC27A3Q5K4L6 730 aa20.78■□□□□ 0.92
MSH5-208ENST00000429846 GGNBP2Q9H3C7 697 aa20.78■□□□□ 0.92
MSH5-208ENST00000429846 LY75O60449 1722 aa20.78■□□□□ 0.92
MSH5-208ENST00000429846 CLSPNQ9HAW4 1339 aa20.78■□□□□ 0.92
MSH5-208ENST00000429846 FBLN1P23142 703 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms