RNA–Protein interactions for RNA: ENST00000429798.1

LIMD1-AS1-202, LIMD1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene LIMD1-AS1, Length 955 nt, Biotype antisense RNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-AS1-202ENST00000429798 PHRF1Q9P1Y6 1649 aaKnown RBP13.79□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 ZBTB7CA1YPR0 619 aa13.78□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 GCP02774 474 aa13.78□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 AMPHP49418 695 aa13.78□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 MRS2Q9HD23 443 aa13.78□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 COL22A1Q8NFW1 1626 aaPredicted RBP13.78□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 MARF1Q9Y4F3 1742 aaKnown RBP13.78□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 RTL1A6NKG5 1358 aa13.77□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 NFAT5O94916 1531 aa13.77□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 KIF24Q5T7B8 1368 aa13.77□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 SHPRHQ149N8 1683 aa13.76□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 CDK12Q9NYV4 1490 aaPredicted RBP13.76□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 SMG6Q86US8 1419 aaKnown RBP13.76□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 FLT4P35916 1363 aa13.76□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 HSPA1LP34931 641 aa13.76□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 MTHFSP49914 203 aa13.76□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 RRS1Q15050 365 aaKnown RBP13.76□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 CABLES1Q8TDN4 633 aa13.75□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 FBXO41Q8TF61 875 aa13.75□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 POLKQ9UBT6 870 aa13.75□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 EMILIN1Q9Y6C2 1016 aa13.75□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 ABCA3Q99758 1704 aa13.75□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 CRYBG1Q9Y4K1 1723 aa13.75□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 MAP3K19Q56UN5 1328 aa13.74□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 SPATA31A6Q5VVP1 1343 aa13.74□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 ZC3H6P61129 1189 aaKnown RBP13.74□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 PRDM11Q9NQV5 511 aa13.74□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 ABCC6O95255 1503 aa13.74□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 MAP2P11137 1827 aaKnown RBP13.74□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 LTN1O94822 1766 aa13.73□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 CPDO75976 1380 aa13.73□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 PITPNM1O00562 1244 aa13.73□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 WDR43Q15061 677 aaKnown RBP eCLIP13.73□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 NUDCQ9Y266 331 aa13.73□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 NUTM2BA6NNL0 878 aaPredicted RBP13.72□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 NUTM2EB1AL46 878 aaPredicted RBP13.72□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 ARHGEF25Q86VW2 580 aa13.72□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 NUTM2AQ8IVF1 878 aaPredicted RBP13.72□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 BLMP54132 1417 aaPredicted RBP13.72□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 KIAA0232Q92628 1395 aa13.71□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 DIAPH1O60610 1272 aaKnown RBP13.71□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 FBLN1P23142 703 aa13.71□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 HOXC9P31274 260 aa13.71□□□□□ -0.21
LIMD1-AS1-202ENST00000429798 IP6K1Q92551 441 aa13.7□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 INSRP06213 1382 aa13.7□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 MEX3CQ5U5Q3 659 aaKnown RBP13.69□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 PEAK1Q9H792 1746 aa13.68□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 ADAMTS2O95450 1211 aa13.68□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 COL14A1Q05707 1796 aaKnown RBP13.68□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 U2SURPO15042 1029 aaKnown RBP13.67□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 CSB-PGBD3P0DP91 1061 aa13.67□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 CHRNA2Q15822 529 aa13.67□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 HSP90AB2PQ58FF8 381 aa13.67□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 COL3A1P02461 1466 aaPredicted RBP13.67□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 NEFMP07197 916 aa13.66□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 ATXN8OSP0DMR3 200 aa13.66□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 LTV1Q96GA3 475 aaPredicted RBP13.66□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 U2AF1L5P0DN76 240 aaPredicted RBP13.65□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 EVA1CP58658 441 aa13.65□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 U2AF1Q01081 240 aaKnown RBP eCLIP13.65□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 EIF4A2Q14240 407 aaKnown RBP13.65□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 CCDC184Q52MB2 194 aa13.65□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 FAM9BQ8IZU0 186 aa13.65□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 ANKRD24Q8TF21 1146 aa13.65□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 PNNQ9H307 717 aaKnown RBP13.65□□□□□ -0.22
LIMD1-AS1-202ENST00000429798 FAM208AQ9UK61 1670 aaKnown RBP13.64□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 ERBB3P21860 1342 aa13.64□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 FAM83GA6ND36 823 aa13.63□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 IL13P35225 146 aa13.63□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 C8orf37Q96NL8 207 aa13.63□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 BTG4Q9NY30 223 aa13.63□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 LMO7Q8WWI1 1683 aa13.63□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 COL5A2P05997 1499 aaPredicted RBP13.62□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 PNISRQ8TF01 805 aaKnown RBP13.62□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 NGLY1Q96IV0 654 aa13.62□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 STRN4Q9NRL3 753 aa13.62□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 NLRP2Q9NX02 1062 aa13.62□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 COL18A1P39060 1754 aa13.62□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 PLCH1Q4KWH8 1693 aa13.62□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 LRP6O75581 1613 aa13.61□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 AXIN2Q9Y2T1 843 aa13.61□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 WDR17Q8IZU2 1322 aa13.61□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 MAPK8IP3Q9UPT6 1336 aa13.61□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 CAMTA1Q9Y6Y1 1673 aa13.6□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 HAX1O00165 279 aa13.6□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 TOM1L2Q6ZVM7 507 aa13.6□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 NWD2Q9ULI1 1742 aa13.6□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 IGSF1Q8N6C5 1336 aa13.6□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 RGPD5Q99666 1765 aa13.59□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 FCHSD2O94868 740 aa13.59□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 ADAMTS8Q9UP79 889 aa13.59□□□□□ -0.23
LIMD1-AS1-202ENST00000429798 CRB1P82279 1406 aa13.58□□□□□ -0.24
LIMD1-AS1-202ENST00000429798 HMOX1P09601 288 aa13.58□□□□□ -0.24
LIMD1-AS1-202ENST00000429798 SULT6B1Q6IMI4 303 aa13.58□□□□□ -0.24
LIMD1-AS1-202ENST00000429798 EYA1Q99502 592 aa13.58□□□□□ -0.24
LIMD1-AS1-202ENST00000429798 CCDC9Q9Y3X0 531 aaKnown RBP13.58□□□□□ -0.24
LIMD1-AS1-202ENST00000429798 SLIT2O94813 1529 aa13.58□□□□□ -0.24
LIMD1-AS1-202ENST00000429798 RGPD1P0DJD0 1748 aa13.57□□□□□ -0.24
LIMD1-AS1-202ENST00000429798 SOCS7O14512 581 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms