RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 KIF7Q2M1P5 1343 aa24.24■■□□□ 1.47
CTSD-203ENST00000429746 CCDC9Q9Y3X0 531 aaKnown RBP24.22■■□□□ 1.47
CTSD-203ENST00000429746 SEPT12Q8IYM1 358 aa24.21■■□□□ 1.47
CTSD-203ENST00000429746 SPATA31A1Q5TZJ5 1347 aa24.2■■□□□ 1.46
CTSD-203ENST00000429746 SOX12O15370 315 aa24.2■■□□□ 1.46
CTSD-203ENST00000429746 LARP1Q6PKG0 1096 aaKnown RBP24.19■■□□□ 1.46
CTSD-203ENST00000429746 ANKRD26Q9UPS8 1709 aa24.18■■□□□ 1.46
CTSD-203ENST00000429746 FBLN1P23142 703 aa24.18■■□□□ 1.46
CTSD-203ENST00000429746 GGNBP2Q9H3C7 697 aa24.18■■□□□ 1.46
CTSD-203ENST00000429746 WNK3Q9BYP7 1800 aa24.17■■□□□ 1.46
CTSD-203ENST00000429746 PEAK1Q9H792 1746 aa24.16■■□□□ 1.46
CTSD-203ENST00000429746 STRN4Q9NRL3 753 aa24.16■■□□□ 1.46
CTSD-203ENST00000429746 WASHC2AQ641Q2 1341 aa24.15■■□□□ 1.46
CTSD-203ENST00000429746 POLR3GLQ9BT43 218 aa24.15■■□□□ 1.46
CTSD-203ENST00000429746 CCDC7Q96M83 1385 aa24.15■■□□□ 1.46
CTSD-203ENST00000429746 CRB1P82279 1406 aa24.14■■□□□ 1.45
CTSD-203ENST00000429746 KRT27Q7Z3Y8 459 aa24.14■■□□□ 1.45
CTSD-203ENST00000429746 COG3Q96JB2 828 aa24.14■■□□□ 1.45
CTSD-203ENST00000429746 PANK3Q9H999 370 aa24.14■■□□□ 1.45
CTSD-203ENST00000429746 BLMP54132 1417 aaPredicted RBP24.13■■□□□ 1.45
CTSD-203ENST00000429746 FAM98CQ17RN3 349 aaKnown RBP24.13■■□□□ 1.45
CTSD-203ENST00000429746 MAP3K19Q56UN5 1328 aa24.12■■□□□ 1.45
CTSD-203ENST00000429746 ZBTB7CA1YPR0 619 aa24.12■■□□□ 1.45
CTSD-203ENST00000429746 WDR17Q8IZU2 1322 aa24.11■■□□□ 1.45
CTSD-203ENST00000429746 PARP4Q9UKK3 1724 aaKnown RBP24.11■■□□□ 1.45
CTSD-203ENST00000429746 ERBB3P21860 1342 aa24.1■■□□□ 1.45
CTSD-203ENST00000429746 BARGINQ6ZT62 677 aa24.09■■□□□ 1.45
CTSD-203ENST00000429746 EVA1CP58658 441 aa24.08■■□□□ 1.45
CTSD-203ENST00000429746 DISP2A7MBM2 1401 aa24.08■■□□□ 1.44
CTSD-203ENST00000429746 CGNL1Q0VF96 1302 aa24.08■■□□□ 1.44
CTSD-203ENST00000429746 SF3B2Q13435 895 aaKnown RBP24.07■■□□□ 1.44
CTSD-203ENST00000429746 IP6K1Q92551 441 aa24.07■■□□□ 1.44
CTSD-203ENST00000429746 LRRC37A3O60309 1634 aa24.06■■□□□ 1.44
CTSD-203ENST00000429746 RGPD2P0DJD1 1756 aa24.06■■□□□ 1.44
CTSD-203ENST00000429746 MAP2P11137 1827 aaKnown RBP24.06■■□□□ 1.44
CTSD-203ENST00000429746 A0A0G2JS52 829 aa24.06■■□□□ 1.44
CTSD-203ENST00000429746 PER1O15534 1290 aaPredicted RBP24.06■■□□□ 1.44
CTSD-203ENST00000429746 MYT1Q01538 1121 aa24.06■■□□□ 1.44
CTSD-203ENST00000429746 RRS1Q15050 365 aaKnown RBP24.06■■□□□ 1.44
CTSD-203ENST00000429746 FAM208AQ9UK61 1670 aaKnown RBP24.05■■□□□ 1.44
CTSD-203ENST00000429746 TCP11L2Q8N4U5 519 aa24.05■■□□□ 1.44
CTSD-203ENST00000429746 RTL1A6NKG5 1358 aa24.04■■□□□ 1.44
CTSD-203ENST00000429746 HOXC9P31274 260 aa24.04■■□□□ 1.44
CTSD-203ENST00000429746 USP35Q9P2H5 1018 aa24.04■■□□□ 1.44
CTSD-203ENST00000429746 THRAP3Q9Y2W1 955 aaKnown RBP24.04■■□□□ 1.44
CTSD-203ENST00000429746 AMER1Q5JTC6 1135 aaPredicted RBP24.03■■□□□ 1.44
CTSD-203ENST00000429746 CARD10Q9BWT7 1032 aa24.03■■□□□ 1.44
CTSD-203ENST00000429746 NSD2O96028 1365 aa24.02■■□□□ 1.44
CTSD-203ENST00000429746 TOM1L2Q6ZVM7 507 aa24.01■■□□□ 1.43
CTSD-203ENST00000429746 ANKRD24Q8TF21 1146 aa24.01■■□□□ 1.43
CTSD-203ENST00000429746 EMILIN1Q9Y6C2 1016 aa24■■□□□ 1.43
CTSD-203ENST00000429746 KIF24Q5T7B8 1368 aa24■■□□□ 1.43
CTSD-203ENST00000429746 SMG6Q86US8 1419 aaKnown RBP23.99■■□□□ 1.43
CTSD-203ENST00000429746 INSRP06213 1382 aa23.97■■□□□ 1.43
CTSD-203ENST00000429746 FLT4P35916 1363 aa23.97■■□□□ 1.43
CTSD-203ENST00000429746 HSP90AB2PQ58FF8 381 aa23.96■■□□□ 1.43
CTSD-203ENST00000429746 POLKQ9UBT6 870 aa23.96■■□□□ 1.43
CTSD-203ENST00000429746 BAG6P46379 1132 aa23.95■■□□□ 1.42
CTSD-203ENST00000429746 AMPHP49418 695 aa23.95■■□□□ 1.42
CTSD-203ENST00000429746 FAM182BQ5T319 152 aa23.95■■□□□ 1.42
CTSD-203ENST00000429746 RGPD1P0DJD0 1748 aa23.95■■□□□ 1.42
CTSD-203ENST00000429746 TNS1Q9HBL0 1735 aaKnown RBP23.94■■□□□ 1.42
CTSD-203ENST00000429746 CSB-PGBD3P0DP91 1061 aa23.94■■□□□ 1.42
CTSD-203ENST00000429746 FAM196AQ6ZSG2 479 aa23.94■■□□□ 1.42
CTSD-203ENST00000429746 NCAPD2Q15021 1401 aa23.93■■□□□ 1.42
CTSD-203ENST00000429746 DEFB132Q7Z7B7 95 aa23.93■■□□□ 1.42
CTSD-203ENST00000429746 KNSTRNQ9Y448 316 aa23.93■■□□□ 1.42
CTSD-203ENST00000429746 SHANK3Q9BYB0 1731 aa23.93■■□□□ 1.42
CTSD-203ENST00000429746 NPC1L1Q9UHC9 1359 aa23.92■■□□□ 1.42
CTSD-203ENST00000429746 NLRP2Q9NX02 1062 aa23.91■■□□□ 1.42
CTSD-203ENST00000429746 SBF2Q86WG5 1849 aa23.91■■□□□ 1.42
CTSD-203ENST00000429746 PDE3BQ13370 1112 aa23.9■■□□□ 1.42
CTSD-203ENST00000429746 LTV1Q96GA3 475 aaPredicted RBP23.9■■□□□ 1.42
CTSD-203ENST00000429746 TNS2Q63HR2 1409 aa23.9■■□□□ 1.42
CTSD-203ENST00000429746 NBPF6Q5VWK0 638 aa23.89■■□□□ 1.41
CTSD-203ENST00000429746 NBPF4Q96M43 638 aa23.89■■□□□ 1.41
CTSD-203ENST00000429746 MEGF6O75095 1541 aa23.89■■□□□ 1.41
CTSD-203ENST00000429746 TNNT2P45379 298 aaPredicted RBP23.88■■□□□ 1.41
CTSD-203ENST00000429746 CDCA7Q9BWT1 371 aaPredicted RBP23.87■■□□□ 1.41
CTSD-203ENST00000429746 MARCH10Q8NA82 808 aaPredicted RBP23.86■■□□□ 1.41
CTSD-203ENST00000429746 BCL9O00512 1426 aa23.85■■□□□ 1.41
CTSD-203ENST00000429746 DDB1Q16531 1140 aa23.85■■□□□ 1.41
CTSD-203ENST00000429746 MORC1Q86VD1 984 aa23.85■■□□□ 1.41
CTSD-203ENST00000429746 IL2RBP14784 551 aa23.83■■□□□ 1.41
CTSD-203ENST00000429746 OVOS2A0A0G2JMS6 1433 aa23.83■■□□□ 1.4
CTSD-203ENST00000429746 USHBP1Q8N6Y0 703 aa23.82■■□□□ 1.4
CTSD-203ENST00000429746 EIF4A2Q14240 407 aaKnown RBP23.81■■□□□ 1.4
CTSD-203ENST00000429746 CC2D1BQ5T0F9 858 aaKnown RBP23.81■■□□□ 1.4
CTSD-203ENST00000429746 PKD1L3Q7Z443 1732 aa23.81■■□□□ 1.4
CTSD-203ENST00000429746 PARD3Q8TEW0 1356 aa23.8■■□□□ 1.4
CTSD-203ENST00000429746 PPM1GO15355 546 aaPredicted RBP23.8■■□□□ 1.4
CTSD-203ENST00000429746 TRIM37O94972 964 aa23.8■■□□□ 1.4
CTSD-203ENST00000429746 ZEB1P37275 1124 aaPredicted RBP23.8■■□□□ 1.4
CTSD-203ENST00000429746 EN1Q05925 392 aaPredicted RBP23.8■■□□□ 1.4
CTSD-203ENST00000429746 EYA1Q99502 592 aa23.79■■□□□ 1.4
CTSD-203ENST00000429746 COL3A1P02461 1466 aaPredicted RBP23.78■■□□□ 1.4
CTSD-203ENST00000429746 EXOC5O00471 708 aa23.77■■□□□ 1.4
CTSD-203ENST00000429746 PTF1AQ7RTS3 328 aa23.77■■□□□ 1.4
CTSD-203ENST00000429746 CAMKK2Q96RR4 588 aa23.76■■□□□ 1.39
CTSD-203ENST00000429746 NHSQ6T4R5 1651 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms