RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 POTEAQ6S8J7 498 aa20.33■□□□□ 0.85
GARNL3-204ENST00000429629 GJD4Q96KN9 370 aaPredicted RBP20.33■□□□□ 0.85
GARNL3-204ENST00000429629 FBLN1P23142 703 aa20.32■□□□□ 0.84
GARNL3-204ENST00000429629 RRS1Q15050 365 aaKnown RBP20.32■□□□□ 0.84
GARNL3-204ENST00000429629 CC2D1BQ5T0F9 858 aaKnown RBP20.32■□□□□ 0.84
GARNL3-204ENST00000429629 CAMTA1Q9Y6Y1 1673 aa20.32■□□□□ 0.84
GARNL3-204ENST00000429629 ONECUT3O60422 494 aaPredicted RBP20.31■□□□□ 0.84
GARNL3-204ENST00000429629 RXRBP28702 533 aa20.31■□□□□ 0.84
GARNL3-204ENST00000429629 FLT4P35916 1363 aa20.31■□□□□ 0.84
GARNL3-204ENST00000429629 SPATA31A5Q5VU36 1347 aa20.3■□□□□ 0.84
GARNL3-204ENST00000429629 SPATA31A7Q8IWB4 1347 aa20.3■□□□□ 0.84
GARNL3-204ENST00000429629 WDR17Q8IZU2 1322 aa20.3■□□□□ 0.84
GARNL3-204ENST00000429629 THRAP3Q9Y2W1 955 aaKnown RBP20.3■□□□□ 0.84
GARNL3-204ENST00000429629 INSRP06213 1382 aa20.3■□□□□ 0.84
GARNL3-204ENST00000429629 NWD2Q9ULI1 1742 aa20.3■□□□□ 0.84
GARNL3-204ENST00000429629 ERBB3P21860 1342 aa20.29■□□□□ 0.84
GARNL3-204ENST00000429629 LMO7Q8WWI1 1683 aa20.29■□□□□ 0.84
GARNL3-204ENST00000429629 ZBTB7CA1YPR0 619 aa20.29■□□□□ 0.84
GARNL3-204ENST00000429629 COL5A2P05997 1499 aaPredicted RBP20.29■□□□□ 0.84
GARNL3-204ENST00000429629 KIF20BQ96Q89 1820 aa20.28■□□□□ 0.84
GARNL3-204ENST00000429629 CARD10Q9BWT7 1032 aa20.28■□□□□ 0.84
GARNL3-204ENST00000429629 EMILIN1Q9Y6C2 1016 aa20.28■□□□□ 0.84
GARNL3-204ENST00000429629 SPATA31A1Q5TZJ5 1347 aa20.27■□□□□ 0.84
GARNL3-204ENST00000429629 RALBP1Q15311 655 aa20.27■□□□□ 0.84
GARNL3-204ENST00000429629 LARP1Q6PKG0 1096 aaKnown RBP20.27■□□□□ 0.84
GARNL3-204ENST00000429629 STRN4Q9NRL3 753 aa20.27■□□□□ 0.84
GARNL3-204ENST00000429629 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.83
GARNL3-204ENST00000429629 COL18A1P39060 1754 aa20.26■□□□□ 0.83
GARNL3-204ENST00000429629 TNNT2P45379 298 aaPredicted RBP20.26■□□□□ 0.83
GARNL3-204ENST00000429629 HSP90AB2PQ58FF8 381 aa20.26■□□□□ 0.83
GARNL3-204ENST00000429629 BARGINQ6ZT62 677 aa20.26■□□□□ 0.83
GARNL3-204ENST00000429629 ANKRD24Q8TF21 1146 aa20.26■□□□□ 0.83
GARNL3-204ENST00000429629 CDK12Q9NYV4 1490 aaPredicted RBP20.25■□□□□ 0.83
GARNL3-204ENST00000429629 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.25■□□□□ 0.83
GARNL3-204ENST00000429629 CRB1P82279 1406 aa20.25■□□□□ 0.83
GARNL3-204ENST00000429629 PARD3Q8TEW0 1356 aa20.24■□□□□ 0.83
GARNL3-204ENST00000429629 CSB-PGBD3P0DP91 1061 aa20.24■□□□□ 0.83
GARNL3-204ENST00000429629 TOM1L2Q6ZVM7 507 aa20.24■□□□□ 0.83
GARNL3-204ENST00000429629 TCP11L2Q8N4U5 519 aa20.24■□□□□ 0.83
GARNL3-204ENST00000429629 CCDC9Q9Y3X0 531 aaKnown RBP20.24■□□□□ 0.83
GARNL3-204ENST00000429629 PPM1GO15355 546 aaPredicted RBP20.23■□□□□ 0.83
GARNL3-204ENST00000429629 MTHFSP49914 203 aa20.23■□□□□ 0.83
GARNL3-204ENST00000429629 CDCA7Q9BWT1 371 aaPredicted RBP20.23■□□□□ 0.83
GARNL3-204ENST00000429629 ANKRD26Q9UPS8 1709 aa20.22■□□□□ 0.83
GARNL3-204ENST00000429629 PLCH1Q4KWH8 1693 aa20.22■□□□□ 0.83
GARNL3-204ENST00000429629 PPP2R1AP30153 589 aa20.21■□□□□ 0.83
GARNL3-204ENST00000429629 NRAPQ86VF7 1730 aa20.2■□□□□ 0.82
GARNL3-204ENST00000429629 NLRP2Q9NX02 1062 aa20.19■□□□□ 0.82
GARNL3-204ENST00000429629 EIF4A2Q14240 407 aaKnown RBP20.17■□□□□ 0.82
GARNL3-204ENST00000429629 NBPF6Q5VWK0 638 aa20.17■□□□□ 0.82
GARNL3-204ENST00000429629 LTV1Q96GA3 475 aaPredicted RBP20.17■□□□□ 0.82
GARNL3-204ENST00000429629 NBPF4Q96M43 638 aa20.17■□□□□ 0.82
GARNL3-204ENST00000429629 PRKRIP1Q9H875 184 aaPredicted RBP20.17■□□□□ 0.82
GARNL3-204ENST00000429629 FAM98CQ17RN3 349 aaKnown RBP20.16■□□□□ 0.82
GARNL3-204ENST00000429629 CFAP53Q96M91 514 aa20.16■□□□□ 0.82
GARNL3-204ENST00000429629 IL13P35225 146 aa20.15■□□□□ 0.82
GARNL3-204ENST00000429629 SEPT12Q8IYM1 358 aa20.15■□□□□ 0.82
GARNL3-204ENST00000429629 USP35Q9P2H5 1018 aa20.15■□□□□ 0.82
GARNL3-204ENST00000429629 LTN1O94822 1766 aa20.14■□□□□ 0.81
GARNL3-204ENST00000429629 GLI3P10071 1580 aa20.14■□□□□ 0.81
GARNL3-204ENST00000429629 EYA1Q99502 592 aa20.14■□□□□ 0.81
GARNL3-204ENST00000429629 NCAPD2Q15021 1401 aa20.13■□□□□ 0.81
GARNL3-204ENST00000429629 PLEKHG2Q9H7P9 1386 aa20.13■□□□□ 0.81
GARNL3-204ENST00000429629 DIAPH1O60610 1272 aaKnown RBP20.13■□□□□ 0.81
GARNL3-204ENST00000429629 CNGB1Q14028 1251 aaPredicted RBP20.13■□□□□ 0.81
GARNL3-204ENST00000429629 PEAK1Q9H792 1746 aa20.13■□□□□ 0.81
GARNL3-204ENST00000429629 IGSF1Q8N6C5 1336 aa20.12■□□□□ 0.81
GARNL3-204ENST00000429629 MYBBP1AQ9BQG0 1328 aaKnown RBP20.12■□□□□ 0.81
GARNL3-204ENST00000429629 IL2RBP14784 551 aa20.12■□□□□ 0.81
GARNL3-204ENST00000429629 DISP2A7MBM2 1401 aa20.11■□□□□ 0.81
GARNL3-204ENST00000429629 RGS12O14924 1447 aa20.1■□□□□ 0.81
GARNL3-204ENST00000429629 MAP2P11137 1827 aaKnown RBP20.09■□□□□ 0.81
GARNL3-204ENST00000429629 EXOC5O00471 708 aa20.09■□□□□ 0.81
GARNL3-204ENST00000429629 ANP32CO43423 234 aa20.09■□□□□ 0.81
GARNL3-204ENST00000429629 ILDR2Q71H61 639 aa20.09■□□□□ 0.81
GARNL3-204ENST00000429629 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.09■□□□□ 0.81
GARNL3-204ENST00000429629 NUDCQ9Y266 331 aa20.09■□□□□ 0.81
GARNL3-204ENST00000429629 RAPGEF4Q8WZA2 1011 aa20.08■□□□□ 0.81
GARNL3-204ENST00000429629 DDB1Q16531 1140 aa20.07■□□□□ 0.8
GARNL3-204ENST00000429629 KRT27Q7Z3Y8 459 aa20.07■□□□□ 0.8
GARNL3-204ENST00000429629 KDRP35968 1356 aa20.07■□□□□ 0.8
GARNL3-204ENST00000429629 FAM208AQ9UK61 1670 aaKnown RBP20.07■□□□□ 0.8
GARNL3-204ENST00000429629 PDE3BQ13370 1112 aa20.06■□□□□ 0.8
GARNL3-204ENST00000429629 COL3A1P02461 1466 aaPredicted RBP20.05■□□□□ 0.8
GARNL3-204ENST00000429629 A0A0G2JS52 829 aa20.05■□□□□ 0.8
GARNL3-204ENST00000429629 TATP17735 454 aaPredicted RBP20.05■□□□□ 0.8
GARNL3-204ENST00000429629 MYT1Q01538 1121 aa20.05■□□□□ 0.8
GARNL3-204ENST00000429629 THSD7AQ9UPZ6 1657 aa20.03■□□□□ 0.8
GARNL3-204ENST00000429629 RGPD5Q99666 1765 aa20.03■□□□□ 0.8
GARNL3-204ENST00000429629 USHBP1Q8N6Y0 703 aa20.03■□□□□ 0.8
GARNL3-204ENST00000429629 ZCRB1Q8TBF4 217 aaKnown RBP20.03■□□□□ 0.8
GARNL3-204ENST00000429629 OVOS2A0A0G2JMS6 1433 aa20.02■□□□□ 0.8
GARNL3-204ENST00000429629 SULT6B1Q6IMI4 303 aa20.02■□□□□ 0.8
GARNL3-204ENST00000429629 BCL9O00512 1426 aa20.02■□□□□ 0.79
GARNL3-204ENST00000429629 FCHSD2O94868 740 aa20.01■□□□□ 0.79
GARNL3-204ENST00000429629 AMOTQ4VCS5 1084 aa20.01■□□□□ 0.79
GARNL3-204ENST00000429629 FAM196AQ6ZSG2 479 aa20.01■□□□□ 0.79
GARNL3-204ENST00000429629 SPG7Q9UQ90 795 aa20■□□□□ 0.79
GARNL3-204ENST00000429629 TNS2Q63HR2 1409 aa19.99■□□□□ 0.79
GARNL3-204ENST00000429629 U2SURPO15042 1029 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms