RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 BCL9LQ86UU0 1499 aa19.82■□□□□ 0.76
SGCE-204ENST00000428696 AATKQ6ZMQ8 1374 aa19.81■□□□□ 0.76
SGCE-204ENST00000428696 LARP1Q6PKG0 1096 aaKnown RBP19.81■□□□□ 0.76
SGCE-204ENST00000428696 TOM1L2Q6ZVM7 507 aa19.81■□□□□ 0.76
SGCE-204ENST00000428696 GJD4Q96KN9 370 aaPredicted RBP19.81■□□□□ 0.76
SGCE-204ENST00000428696 SLIT2O94813 1529 aa19.81■□□□□ 0.76
SGCE-204ENST00000428696 CRYBG1Q9Y4K1 1723 aa19.81■□□□□ 0.76
SGCE-204ENST00000428696 RBM6P78332 1123 aaKnown RBP19.8■□□□□ 0.76
SGCE-204ENST00000428696 VPS72Q15906 364 aa19.8■□□□□ 0.76
SGCE-204ENST00000428696 MARF1Q9Y4F3 1742 aaKnown RBP19.8■□□□□ 0.76
SGCE-204ENST00000428696 COL14A1Q05707 1796 aaKnown RBP19.8■□□□□ 0.76
SGCE-204ENST00000428696 IP6K1Q92551 441 aa19.79■□□□□ 0.76
SGCE-204ENST00000428696 EMILIN1Q9Y6C2 1016 aa19.79■□□□□ 0.76
SGCE-204ENST00000428696 KIF20BQ96Q89 1820 aa19.78■□□□□ 0.76
SGCE-204ENST00000428696 NSD2O96028 1365 aa19.78■□□□□ 0.76
SGCE-204ENST00000428696 NFAT5O94916 1531 aa19.78■□□□□ 0.76
SGCE-204ENST00000428696 HOXC9P31274 260 aa19.77■□□□□ 0.76
SGCE-204ENST00000428696 ANKRD24Q8TF21 1146 aa19.77■□□□□ 0.76
SGCE-204ENST00000428696 NLRP2Q9NX02 1062 aa19.77■□□□□ 0.76
SGCE-204ENST00000428696 CAMTA1Q9Y6Y1 1673 aa19.77■□□□□ 0.76
SGCE-204ENST00000428696 ILDR2Q71H61 639 aa19.76■□□□□ 0.75
SGCE-204ENST00000428696 FAM98CQ17RN3 349 aaKnown RBP19.76■□□□□ 0.75
SGCE-204ENST00000428696 HSP90AB2PQ58FF8 381 aa19.76■□□□□ 0.75
SGCE-204ENST00000428696 POLKQ9UBT6 870 aa19.76■□□□□ 0.75
SGCE-204ENST00000428696 PLCH1Q4KWH8 1693 aa19.75■□□□□ 0.75
SGCE-204ENST00000428696 ATRNO75882 1429 aa19.75■□□□□ 0.75
SGCE-204ENST00000428696 SPATA31A5Q5VU36 1347 aa19.74■□□□□ 0.75
SGCE-204ENST00000428696 SPATA31A7Q8IWB4 1347 aa19.74■□□□□ 0.75
SGCE-204ENST00000428696 WDR17Q8IZU2 1322 aa19.72■□□□□ 0.75
SGCE-204ENST00000428696 SPATA31A1Q5TZJ5 1347 aa19.72■□□□□ 0.75
SGCE-204ENST00000428696 COL5A2P05997 1499 aaPredicted RBP19.71■□□□□ 0.75
SGCE-204ENST00000428696 TCP11L2Q8N4U5 519 aa19.71■□□□□ 0.75
SGCE-204ENST00000428696 USP54Q70EL1 1684 aa19.7■□□□□ 0.74
SGCE-204ENST00000428696 MTHFSP49914 203 aa19.7■□□□□ 0.74
SGCE-204ENST00000428696 NWD2Q9ULI1 1742 aa19.7■□□□□ 0.74
SGCE-204ENST00000428696 FLT4P35916 1363 aa19.7■□□□□ 0.74
SGCE-204ENST00000428696 SEPT12Q8IYM1 358 aa19.69■□□□□ 0.74
SGCE-204ENST00000428696 ERBB3P21860 1342 aa19.69■□□□□ 0.74
SGCE-204ENST00000428696 LTN1O94822 1766 aa19.69■□□□□ 0.74
SGCE-204ENST00000428696 CARD10Q9BWT7 1032 aa19.68■□□□□ 0.74
SGCE-204ENST00000428696 NPC1L1Q9UHC9 1359 aa19.68■□□□□ 0.74
SGCE-204ENST00000428696 BLMP54132 1417 aaPredicted RBP19.68■□□□□ 0.74
SGCE-204ENST00000428696 CRB1P82279 1406 aa19.68■□□□□ 0.74
SGCE-204ENST00000428696 LMO7Q8WWI1 1683 aa19.68■□□□□ 0.74
SGCE-204ENST00000428696 USHBP1Q8N6Y0 703 aa19.68■□□□□ 0.74
SGCE-204ENST00000428696 RTL1A6NKG5 1358 aa19.67■□□□□ 0.74
SGCE-204ENST00000428696 COL18A1P39060 1754 aa19.67■□□□□ 0.74
SGCE-204ENST00000428696 INSRP06213 1382 aa19.66■□□□□ 0.74
SGCE-204ENST00000428696 SMG6Q86US8 1419 aaKnown RBP19.66■□□□□ 0.74
SGCE-204ENST00000428696 RGPD5Q99666 1765 aa19.65■□□□□ 0.74
SGCE-204ENST00000428696 THRAP3Q9Y2W1 955 aaKnown RBP19.65■□□□□ 0.74
SGCE-204ENST00000428696 NRAPQ86VF7 1730 aa19.65■□□□□ 0.74
SGCE-204ENST00000428696 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.64■□□□□ 0.73
SGCE-204ENST00000428696 PPP2R1AP30153 589 aa19.64■□□□□ 0.73
SGCE-204ENST00000428696 NBPF6Q5VWK0 638 aa19.64■□□□□ 0.73
SGCE-204ENST00000428696 NBPF4Q96M43 638 aa19.64■□□□□ 0.73
SGCE-204ENST00000428696 KIF24Q5T7B8 1368 aa19.64■□□□□ 0.73
SGCE-204ENST00000428696 ANKRD26Q9UPS8 1709 aa19.63■□□□□ 0.73
SGCE-204ENST00000428696 PDE3BQ13370 1112 aa19.63■□□□□ 0.73
SGCE-204ENST00000428696 EIF4A2Q14240 407 aaKnown RBP19.63■□□□□ 0.73
SGCE-204ENST00000428696 GLI3P10071 1580 aa19.62■□□□□ 0.73
SGCE-204ENST00000428696 MAP2P11137 1827 aaKnown RBP19.62■□□□□ 0.73
SGCE-204ENST00000428696 BARGINQ6ZT62 677 aa19.62■□□□□ 0.73
SGCE-204ENST00000428696 RGS12O14924 1447 aa19.61■□□□□ 0.73
SGCE-204ENST00000428696 ONECUT3O60422 494 aaPredicted RBP19.61■□□□□ 0.73
SGCE-204ENST00000428696 CFAP53Q96M91 514 aa19.61■□□□□ 0.73
SGCE-204ENST00000428696 FAM182BQ5T319 152 aa19.6■□□□□ 0.73
SGCE-204ENST00000428696 KRT27Q7Z3Y8 459 aa19.6■□□□□ 0.73
SGCE-204ENST00000428696 PEAK1Q9H792 1746 aa19.6■□□□□ 0.73
SGCE-204ENST00000428696 ABCC6O95255 1503 aa19.6■□□□□ 0.73
SGCE-204ENST00000428696 EXOC5O00471 708 aa19.59■□□□□ 0.73
SGCE-204ENST00000428696 IL2RBP14784 551 aa19.59■□□□□ 0.73
SGCE-204ENST00000428696 RALBP1Q15311 655 aa19.59■□□□□ 0.73
SGCE-204ENST00000428696 RAPGEF4Q8WZA2 1011 aa19.59■□□□□ 0.73
SGCE-204ENST00000428696 EYA1Q99502 592 aa19.59■□□□□ 0.73
SGCE-204ENST00000428696 U2SURPO15042 1029 aaKnown RBP19.59■□□□□ 0.73
SGCE-204ENST00000428696 DIAPH1O60610 1272 aaKnown RBP19.59■□□□□ 0.73
SGCE-204ENST00000428696 DDB1Q16531 1140 aa19.59■□□□□ 0.73
SGCE-204ENST00000428696 CDCA7Q9BWT1 371 aaPredicted RBP19.58■□□□□ 0.72
SGCE-204ENST00000428696 CDK12Q9NYV4 1490 aaPredicted RBP19.56■□□□□ 0.72
SGCE-204ENST00000428696 TATP17735 454 aaPredicted RBP19.56■□□□□ 0.72
SGCE-204ENST00000428696 DDX54Q8TDD1 881 aaKnown RBP19.56■□□□□ 0.72
SGCE-204ENST00000428696 ANP32CO43423 234 aa19.55■□□□□ 0.72
SGCE-204ENST00000428696 IL13P35225 146 aa19.55■□□□□ 0.72
SGCE-204ENST00000428696 SULT6B1Q6IMI4 303 aa19.54■□□□□ 0.72
SGCE-204ENST00000428696 PARD3Q8TEW0 1356 aa19.54■□□□□ 0.72
SGCE-204ENST00000428696 HMOX1P09601 288 aa19.53■□□□□ 0.72
SGCE-204ENST00000428696 PRKRIP1Q9H875 184 aaPredicted RBP19.53■□□□□ 0.72
SGCE-204ENST00000428696 NUDCQ9Y266 331 aa19.52■□□□□ 0.72
SGCE-204ENST00000428696 ZCRB1Q8TBF4 217 aaKnown RBP19.51■□□□□ 0.71
SGCE-204ENST00000428696 MYBBP1AQ9BQG0 1328 aaKnown RBP19.51■□□□□ 0.71
SGCE-204ENST00000428696 AEBP1Q8IUX7 1158 aa19.51■□□□□ 0.71
SGCE-204ENST00000428696 U2AF1L5P0DN76 240 aaPredicted RBP19.5■□□□□ 0.71
SGCE-204ENST00000428696 U2AF1Q01081 240 aaKnown RBP eCLIP19.5■□□□□ 0.71
SGCE-204ENST00000428696 RGPD2P0DJD1 1756 aa19.49■□□□□ 0.71
SGCE-204ENST00000428696 IGSF1Q8N6C5 1336 aa19.48■□□□□ 0.71
SGCE-204ENST00000428696 MARCH10Q8NA82 808 aaPredicted RBP19.48■□□□□ 0.71
SGCE-204ENST00000428696 FAM196AQ6ZSG2 479 aa19.47■□□□□ 0.71
SGCE-204ENST00000428696 SPG7Q9UQ90 795 aa19.47■□□□□ 0.71
SGCE-204ENST00000428696 DISP2A7MBM2 1401 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms