RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 GIGYF1O75420 1035 aaPredicted RBP17.1■□□□□ 0.33
DDX39B-209ENST00000428450 MAP3K5Q99683 1374 aa17.1■□□□□ 0.33
DDX39B-209ENST00000428450 PLEKHG3A1L390 1219 aa17.09■□□□□ 0.33
DDX39B-209ENST00000428450 ARXQ96QS3 562 aa17.09■□□□□ 0.33
DDX39B-209ENST00000428450 CDK19Q9BWU1 502 aa17.08■□□□□ 0.32
DDX39B-209ENST00000428450 NLRP13Q86W25 1043 aa17.07■□□□□ 0.32
DDX39B-209ENST00000428450 CCDC61Q9Y6R9 512 aa17.07■□□□□ 0.32
DDX39B-209ENST00000428450 AATKQ6ZMQ8 1374 aa17.05■□□□□ 0.32
DDX39B-209ENST00000428450 GPR162Q16538 588 aa17.05■□□□□ 0.32
DDX39B-209ENST00000428450 TOPAZ1Q8N9V7 1692 aa17.04■□□□□ 0.32
DDX39B-209ENST00000428450 TOM1L2Q6ZVM7 507 aa17.04■□□□□ 0.32
DDX39B-209ENST00000428450 CDCA7Q9BWT1 371 aaPredicted RBP17.02■□□□□ 0.32
DDX39B-209ENST00000428450 KDM2AQ9Y2K7 1162 aa17.02■□□□□ 0.32
DDX39B-209ENST00000428450 AXIN2Q9Y2T1 843 aa17.02■□□□□ 0.32
DDX39B-209ENST00000428450 ARHGEF28Q8N1W1 1705 aaKnown RBP17.01■□□□□ 0.31
DDX39B-209ENST00000428450 WDR17Q8IZU2 1322 aa17■□□□□ 0.31
DDX39B-209ENST00000428450 ZBTB7CA1YPR0 619 aa17■□□□□ 0.31
DDX39B-209ENST00000428450 DCAF11Q8TEB1 546 aa17■□□□□ 0.31
DDX39B-209ENST00000428450 SHANK3Q9BYB0 1731 aa17■□□□□ 0.31
DDX39B-209ENST00000428450 COL18A1P39060 1754 aa16.99■□□□□ 0.31
DDX39B-209ENST00000428450 WNK3Q9BYP7 1800 aa16.98■□□□□ 0.31
DDX39B-209ENST00000428450 AKAP12Q02952 1782 aa16.97■□□□□ 0.31
DDX39B-209ENST00000428450 PAPPAQ13219 1627 aa16.97■□□□□ 0.31
DDX39B-209ENST00000428450 ZNF827Q17R98 1081 aa16.97■□□□□ 0.31
DDX39B-209ENST00000428450 SLIT3O75094 1523 aa16.96■□□□□ 0.31
DDX39B-209ENST00000428450 EXOC5O00471 708 aa16.96■□□□□ 0.31
DDX39B-209ENST00000428450 NLRP6P59044 892 aa16.96■□□□□ 0.31
DDX39B-209ENST00000428450 CARD10Q9BWT7 1032 aa16.96■□□□□ 0.31
DDX39B-209ENST00000428450 BRD4O60885 1362 aaPredicted RBP16.95■□□□□ 0.3
DDX39B-209ENST00000428450 STAC3Q96MF2 364 aa16.95■□□□□ 0.3
DDX39B-209ENST00000428450 PELP1Q8IZL8 1130 aaKnown RBP16.94■□□□□ 0.3
DDX39B-209ENST00000428450 LRRC4BQ9NT99 713 aa16.94■□□□□ 0.3
DDX39B-209ENST00000428450 PPIP5K1Q6PFW1 1433 aa16.94■□□□□ 0.3
DDX39B-209ENST00000428450 ARHGEF25Q86VW2 580 aa16.93■□□□□ 0.3
DDX39B-209ENST00000428450 NLGN2Q8NFZ4 835 aa16.93■□□□□ 0.3
DDX39B-209ENST00000428450 KLHL34Q8N239 644 aa16.92■□□□□ 0.3
DDX39B-209ENST00000428450 SLC16A10Q8TF71 515 aa16.92■□□□□ 0.3
DDX39B-209ENST00000428450 ACSBG1Q96GR2 724 aa16.92■□□□□ 0.3
DDX39B-209ENST00000428450 USP6P35125 1406 aa16.91■□□□□ 0.3
DDX39B-209ENST00000428450 CPSF1Q10570 1443 aaKnown RBP16.91■□□□□ 0.3
DDX39B-209ENST00000428450 YBX3P16989 372 aaKnown RBP eCLIP16.91■□□□□ 0.3
DDX39B-209ENST00000428450 AKT1S1Q96B36 256 aa16.91■□□□□ 0.3
DDX39B-209ENST00000428450 NHSQ6T4R5 1651 aa16.91■□□□□ 0.3
DDX39B-209ENST00000428450 COL24A1Q17RW2 1714 aa16.9■□□□□ 0.3
DDX39B-209ENST00000428450 TNS2Q63HR2 1409 aa16.9■□□□□ 0.3
DDX39B-209ENST00000428450 CABP2Q9NPB3 220 aa16.9■□□□□ 0.3
DDX39B-209ENST00000428450 CSB-PGBD3P0DP91 1061 aa16.89■□□□□ 0.29
DDX39B-209ENST00000428450 HSPA6P17066 643 aa16.89■□□□□ 0.29
DDX39B-209ENST00000428450 POLD1P28340 1107 aa16.89■□□□□ 0.29
DDX39B-209ENST00000428450 SRPK2P78362 688 aaKnown RBP16.89■□□□□ 0.29
DDX39B-209ENST00000428450 GRIN3BO60391 1043 aa16.88■□□□□ 0.29
DDX39B-209ENST00000428450 CABP1Q9NZU7 370 aa16.88■□□□□ 0.29
DDX39B-209ENST00000428450 PNPLA7Q6ZV29 1317 aa16.88■□□□□ 0.29
DDX39B-209ENST00000428450 CCDC7Q96M83 1385 aa16.88■□□□□ 0.29
DDX39B-209ENST00000428450 ATP10DQ9P241 1426 aa16.87■□□□□ 0.29
DDX39B-209ENST00000428450 RGPD5Q99666 1765 aa16.87■□□□□ 0.29
DDX39B-209ENST00000428450 TRPM1Q7Z4N2 1603 aa16.86■□□□□ 0.29
DDX39B-209ENST00000428450 PIK3C2AO00443 1686 aa16.86■□□□□ 0.29
DDX39B-209ENST00000428450 BTAF1O14981 1849 aa16.85■□□□□ 0.29
DDX39B-209ENST00000428450 KCNH5Q8NCM2 988 aa16.84■□□□□ 0.29
DDX39B-209ENST00000428450 GPBP1L1Q9HC44 474 aaPredicted RBP16.84■□□□□ 0.29
DDX39B-209ENST00000428450 ABCC6O95255 1503 aa16.84■□□□□ 0.29
DDX39B-209ENST00000428450 QSER1Q2KHR3 1735 aa16.84■□□□□ 0.29
DDX39B-209ENST00000428450 SOX12O15370 315 aa16.82■□□□□ 0.28
DDX39B-209ENST00000428450 NBPF1Q3BBV0 1214 aa16.82■□□□□ 0.28
DDX39B-209ENST00000428450 SLC27A3Q5K4L6 730 aa16.82■□□□□ 0.28
DDX39B-209ENST00000428450 ADCY9O60503 1353 aa16.81■□□□□ 0.28
DDX39B-209ENST00000428450 TFCP2L1Q9NZI6 479 aa16.81■□□□□ 0.28
DDX39B-209ENST00000428450 TTC21BQ7Z4L5 1316 aa16.8■□□□□ 0.28
DDX39B-209ENST00000428450 CENPJQ9HC77 1338 aaPredicted RBP16.8■□□□□ 0.28
DDX39B-209ENST00000428450 NFAT5O94916 1531 aa16.8■□□□□ 0.28
DDX39B-209ENST00000428450 KAT6BQ8WYB5 2073 aa16.79■□□□□ 0.28
DDX39B-209ENST00000428450 IL2RBP14784 551 aa16.79■□□□□ 0.28
DDX39B-209ENST00000428450 KCNQ4P56696 695 aa16.79■□□□□ 0.28
DDX39B-209ENST00000428450 TUBGCP6Q96RT7 1819 aa16.78■□□□□ 0.28
DDX39B-209ENST00000428450 RAB3GAP2Q9H2M9 1393 aa16.77■□□□□ 0.28
DDX39B-209ENST00000428450 ERBB3P21860 1342 aa16.77■□□□□ 0.28
DDX39B-209ENST00000428450 KIAA1210Q9ULL0 1709 aa16.77■□□□□ 0.28
DDX39B-209ENST00000428450 NLRP2Q9NX02 1062 aa16.77■□□□□ 0.28
DDX39B-209ENST00000428450 QRICH2Q9H0J4 1663 aa16.76■□□□□ 0.27
DDX39B-209ENST00000428450 ZNF526Q8TF50 670 aaPredicted RBP16.76■□□□□ 0.27
DDX39B-209ENST00000428450 ZNF692Q9BU19 519 aaPredicted RBP16.76■□□□□ 0.27
DDX39B-209ENST00000428450 TTC21AQ8NDW8 1320 aa16.74■□□□□ 0.27
DDX39B-209ENST00000428450 KIF3CO14782 793 aa16.74■□□□□ 0.27
DDX39B-209ENST00000428450 COL23A1Q86Y22 540 aaPredicted RBP16.74■□□□□ 0.27
DDX39B-209ENST00000428450 DNAJC5GQ8N7S2 189 aa16.74■□□□□ 0.27
DDX39B-209ENST00000428450 CD2APQ9Y5K6 639 aa16.73■□□□□ 0.27
DDX39B-209ENST00000428450 NSD2O96028 1365 aa16.7■□□□□ 0.26
DDX39B-209ENST00000428450 PRIM1P49642 420 aaKnown RBP16.7■□□□□ 0.26
DDX39B-209ENST00000428450 APLP1P51693 650 aa16.7■□□□□ 0.26
DDX39B-209ENST00000428450 MSL1Q68DK7 614 aa16.7■□□□□ 0.26
DDX39B-209ENST00000428450 DDX54Q8TDD1 881 aaKnown RBP16.7■□□□□ 0.26
DDX39B-209ENST00000428450 ANKRD24Q8TF21 1146 aa16.7■□□□□ 0.26
DDX39B-209ENST00000428450 MSH5O43196 834 aa16.69■□□□□ 0.26
DDX39B-209ENST00000428450 EVC2Q86UK5 1308 aa16.69■□□□□ 0.26
DDX39B-209ENST00000428450 LY75O60449 1722 aa16.68■□□□□ 0.26
DDX39B-209ENST00000428450 USP31Q70CQ4 1352 aa16.68■□□□□ 0.26
DDX39B-209ENST00000428450 ANKRD36BQ8N2N9 1353 aa16.68■□□□□ 0.26
DDX39B-209ENST00000428450 SYTL4Q96C24 671 aaPredicted RBP16.68■□□□□ 0.26
DDX39B-209ENST00000428450 CCNL1Q9UK58 526 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms