RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 KCNQ2O43526 872 aa24.39■■□□□ 1.49
PSMD4-203ENST00000427779 WDR17Q8IZU2 1322 aa24.38■■□□□ 1.49
PSMD4-203ENST00000427779 CDCA7Q9BWT1 371 aaPredicted RBP24.38■■□□□ 1.49
PSMD4-203ENST00000427779 CPSF1Q10570 1443 aaKnown RBP24.37■■□□□ 1.49
PSMD4-203ENST00000427779 DCAF8L1A6NGE4 600 aa24.37■■□□□ 1.49
PSMD4-203ENST00000427779 NINLQ9Y2I6 1382 aa24.37■■□□□ 1.49
PSMD4-203ENST00000427779 BCL11BQ9C0K0 894 aaPredicted RBP24.36■■□□□ 1.49
PSMD4-203ENST00000427779 YY1P25490 414 aa24.35■■□□□ 1.49
PSMD4-203ENST00000427779 KCNH5Q8NCM2 988 aa24.35■■□□□ 1.49
PSMD4-203ENST00000427779 ZNF692Q9BU19 519 aaPredicted RBP24.35■■□□□ 1.49
PSMD4-203ENST00000427779 RGPD5Q99666 1765 aa24.34■■□□□ 1.49
PSMD4-203ENST00000427779 BCL9O00512 1426 aa24.34■■□□□ 1.49
PSMD4-203ENST00000427779 CASZ1Q86V15 1759 aa24.32■■□□□ 1.48
PSMD4-203ENST00000427779 AXIN2Q9Y2T1 843 aa24.32■■□□□ 1.48
PSMD4-203ENST00000427779 TTC21BQ7Z4L5 1316 aa24.32■■□□□ 1.48
PSMD4-203ENST00000427779 TTC21AQ8NDW8 1320 aa24.32■■□□□ 1.48
PSMD4-203ENST00000427779 ARHGEF25Q86VW2 580 aa24.31■■□□□ 1.48
PSMD4-203ENST00000427779 L3MBTL2Q969R5 705 aa24.31■■□□□ 1.48
PSMD4-203ENST00000427779 CSB-PGBD3P0DP91 1061 aa24.3■■□□□ 1.48
PSMD4-203ENST00000427779 MARCH10Q8NA82 808 aaPredicted RBP24.3■■□□□ 1.48
PSMD4-203ENST00000427779 CARD10Q9BWT7 1032 aa24.3■■□□□ 1.48
PSMD4-203ENST00000427779 ANO8Q9HCE9 1232 aaPredicted RBP24.29■■□□□ 1.48
PSMD4-203ENST00000427779 ABCC6O95255 1503 aa24.29■■□□□ 1.48
PSMD4-203ENST00000427779 ROCK2O75116 1388 aaKnown RBP24.28■■□□□ 1.48
PSMD4-203ENST00000427779 CCDC7Q96M83 1385 aa24.27■■□□□ 1.48
PSMD4-203ENST00000427779 NFAT5O94916 1531 aa24.26■■□□□ 1.47
PSMD4-203ENST00000427779 SOX12O15370 315 aa24.26■■□□□ 1.47
PSMD4-203ENST00000427779 EXOC5O00471 708 aa24.25■■□□□ 1.47
PSMD4-203ENST00000427779 PTF1AQ7RTS3 328 aa24.25■■□□□ 1.47
PSMD4-203ENST00000427779 MON2Q7Z3U7 1717 aa24.24■■□□□ 1.47
PSMD4-203ENST00000427779 KTN1Q86UP2 1357 aaKnown RBP24.24■■□□□ 1.47
PSMD4-203ENST00000427779 PROM2Q8N271 834 aa24.23■■□□□ 1.47
PSMD4-203ENST00000427779 TNS2Q63HR2 1409 aa24.22■■□□□ 1.47
PSMD4-203ENST00000427779 STK32BQ9NY57 414 aa24.22■■□□□ 1.47
PSMD4-203ENST00000427779 TXNRD1Q16881 649 aa24.21■■□□□ 1.47
PSMD4-203ENST00000427779 MYOM1P52179 1685 aa24.21■■□□□ 1.47
PSMD4-203ENST00000427779 NHSQ6T4R5 1651 aa24.21■■□□□ 1.47
PSMD4-203ENST00000427779 USP54Q70EL1 1684 aa24.21■■□□□ 1.47
PSMD4-203ENST00000427779 ZBTB7AO95365 584 aa24.2■■□□□ 1.46
PSMD4-203ENST00000427779 SLC15A2Q16348 729 aa24.18■■□□□ 1.46
PSMD4-203ENST00000427779 PDGFDQ9GZP0 370 aaPredicted RBP24.18■■□□□ 1.46
PSMD4-203ENST00000427779 LTN1O94822 1766 aa24.18■■□□□ 1.46
PSMD4-203ENST00000427779 SIN3AQ96ST3 1273 aa24.17■■□□□ 1.46
PSMD4-203ENST00000427779 USP31Q70CQ4 1352 aa24.16■■□□□ 1.46
PSMD4-203ENST00000427779 SBNO2Q9Y2G9 1366 aa24.16■■□□□ 1.46
PSMD4-203ENST00000427779 PTGER2P43116 358 aa24.15■■□□□ 1.46
PSMD4-203ENST00000427779 ERBB3P21860 1342 aa24.14■■□□□ 1.46
PSMD4-203ENST00000427779 NEUROD1Q13562 356 aa24.14■■□□□ 1.45
PSMD4-203ENST00000427779 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.14■■□□□ 1.45
PSMD4-203ENST00000427779 ATF5Q9Y2D1 282 aaPredicted RBP24.14■■□□□ 1.45
PSMD4-203ENST00000427779 MTFR1LQ9H019 292 aa24.13■■□□□ 1.45
PSMD4-203ENST00000427779 NLRP2Q9NX02 1062 aa24.13■■□□□ 1.45
PSMD4-203ENST00000427779 KAT6BQ8WYB5 2073 aa24.13■■□□□ 1.45
PSMD4-203ENST00000427779 IL2RBP14784 551 aa24.11■■□□□ 1.45
PSMD4-203ENST00000427779 BTAF1O14981 1849 aa24.11■■□□□ 1.45
PSMD4-203ENST00000427779 HDGFL2Q7Z4V5 671 aaPredicted RBP24.1■■□□□ 1.45
PSMD4-203ENST00000427779 CD163L1Q9NR16 1453 aa24.09■■□□□ 1.45
PSMD4-203ENST00000427779 NME9Q86XW9 330 aa24.09■■□□□ 1.45
PSMD4-203ENST00000427779 ACSBG1Q96GR2 724 aa24.09■■□□□ 1.45
PSMD4-203ENST00000427779 PAPPAQ13219 1627 aa24.09■■□□□ 1.45
PSMD4-203ENST00000427779 TMC1Q8TDI8 760 aa24.08■■□□□ 1.45
PSMD4-203ENST00000427779 FHDC1Q9C0D6 1143 aaPredicted RBP24.08■■□□□ 1.45
PSMD4-203ENST00000427779 ANKRD24Q8TF21 1146 aa24.07■■□□□ 1.44
PSMD4-203ENST00000427779 SYT17Q9BSW7 474 aa24.07■■□□□ 1.44
PSMD4-203ENST00000427779 EDC4Q6P2E9 1401 aaKnown RBP24.07■■□□□ 1.44
PSMD4-203ENST00000427779 CHD4Q14839 1912 aa24.06■■□□□ 1.44
PSMD4-203ENST00000427779 CARD11Q9BXL7 1154 aa24.06■■□□□ 1.44
PSMD4-203ENST00000427779 FAM208AQ9UK61 1670 aaKnown RBP24.05■■□□□ 1.44
PSMD4-203ENST00000427779 SGIP1Q9BQI5 828 aa24.05■■□□□ 1.44
PSMD4-203ENST00000427779 TERF2IPQ9NYB0 399 aa24.04■■□□□ 1.44
PSMD4-203ENST00000427779 UTRNP46939 3433 aa24.04■■□□□ 1.44
PSMD4-203ENST00000427779 ARXQ96QS3 562 aa24.01■■□□□ 1.43
PSMD4-203ENST00000427779 SLC12A5Q9H2X9 1139 aa24.01■■□□□ 1.43
PSMD4-203ENST00000427779 QSER1Q2KHR3 1735 aa24.01■■□□□ 1.43
PSMD4-203ENST00000427779 ZNF784Q8NCA9 323 aaPredicted RBP24■■□□□ 1.43
PSMD4-203ENST00000427779 A0A1W2PP64 1363 aa24■■□□□ 1.43
PSMD4-203ENST00000427779 MAP3K5Q99683 1374 aa24■■□□□ 1.43
PSMD4-203ENST00000427779 PUS7Q96PZ0 661 aaKnown RBP23.99■■□□□ 1.43
PSMD4-203ENST00000427779 ZNF827Q17R98 1081 aa23.97■■□□□ 1.43
PSMD4-203ENST00000427779 SLC27A3Q5K4L6 730 aa23.97■■□□□ 1.43
PSMD4-203ENST00000427779 IP6K1Q92551 441 aa23.97■■□□□ 1.43
PSMD4-203ENST00000427779 LRRC4BQ9NT99 713 aa23.96■■□□□ 1.43
PSMD4-203ENST00000427779 SLC16A10Q8TF71 515 aa23.95■■□□□ 1.42
PSMD4-203ENST00000427779 DDX54Q8TDD1 881 aaKnown RBP23.94■■□□□ 1.42
PSMD4-203ENST00000427779 AKT1S1Q96B36 256 aa23.93■■□□□ 1.42
PSMD4-203ENST00000427779 LTV1Q96GA3 475 aaPredicted RBP23.93■■□□□ 1.42
PSMD4-203ENST00000427779 DOT1LQ8TEK3 1739 aa23.93■■□□□ 1.42
PSMD4-203ENST00000427779 TONSLQ96HA7 1378 aa23.92■■□□□ 1.42
PSMD4-203ENST00000427779 POLD1P28340 1107 aa23.92■■□□□ 1.42
PSMD4-203ENST00000427779 COL24A1Q17RW2 1714 aa23.92■■□□□ 1.42
PSMD4-203ENST00000427779 COG3Q96JB2 828 aa23.91■■□□□ 1.42
PSMD4-203ENST00000427779 LY75O60449 1722 aa23.9■■□□□ 1.42
PSMD4-203ENST00000427779 TUBGCP6Q96RT7 1819 aa23.9■■□□□ 1.42
PSMD4-203ENST00000427779 SYTL4Q96C24 671 aaPredicted RBP23.9■■□□□ 1.42
PSMD4-203ENST00000427779 ANKRD36BQ8N2N9 1353 aa23.9■■□□□ 1.42
PSMD4-203ENST00000427779 SLC24A1O60721 1099 aa23.89■■□□□ 1.41
PSMD4-203ENST00000427779 GPR162Q16538 588 aa23.88■■□□□ 1.41
PSMD4-203ENST00000427779 TFCP2L1Q9NZI6 479 aa23.88■■□□□ 1.41
PSMD4-203ENST00000427779 RGPD2P0DJD1 1756 aa23.88■■□□□ 1.41
PSMD4-203ENST00000427779 SHANK3Q9BYB0 1731 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms