RNA–Protein interactions for RNA: ENST00000426797.7

EDC3-202, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-202ENST00000426797 LTN1O94822 1766 aa22.5■■□□□ 1.19
EDC3-202ENST00000426797 COL3A1P02461 1466 aaPredicted RBP22.49■■□□□ 1.19
EDC3-202ENST00000426797 KIF24Q5T7B8 1368 aa22.48■■□□□ 1.19
EDC3-202ENST00000426797 IL13P35225 146 aa22.48■■□□□ 1.19
EDC3-202ENST00000426797 WDR43Q15061 677 aaKnown RBP eCLIP22.48■■□□□ 1.19
EDC3-202ENST00000426797 AXIN2Q9Y2T1 843 aa22.48■■□□□ 1.19
EDC3-202ENST00000426797 KIAA0232Q92628 1395 aa22.48■■□□□ 1.19
EDC3-202ENST00000426797 CHRNA2Q15822 529 aa22.48■■□□□ 1.19
EDC3-202ENST00000426797 EIF4A2Q14240 407 aaKnown RBP22.47■■□□□ 1.19
EDC3-202ENST00000426797 NUDCQ9Y266 331 aa22.46■■□□□ 1.19
EDC3-202ENST00000426797 U2SURPO15042 1029 aaKnown RBP22.46■■□□□ 1.19
EDC3-202ENST00000426797 CPDO75976 1380 aa22.45■■□□□ 1.19
EDC3-202ENST00000426797 COL22A1Q8NFW1 1626 aaPredicted RBP22.45■■□□□ 1.18
EDC3-202ENST00000426797 LTV1Q96GA3 475 aaPredicted RBP22.45■■□□□ 1.18
EDC3-202ENST00000426797 PRDM11Q9NQV5 511 aa22.45■■□□□ 1.18
EDC3-202ENST00000426797 RTL1A6NKG5 1358 aa22.44■■□□□ 1.18
EDC3-202ENST00000426797 SENP3-EIF4A1A0A087X0R7 540 aa22.44■■□□□ 1.18
EDC3-202ENST00000426797 U2AF1L5P0DN76 240 aaPredicted RBP22.44■■□□□ 1.18
EDC3-202ENST00000426797 U2AF1Q01081 240 aaKnown RBP eCLIP22.44■■□□□ 1.18
EDC3-202ENST00000426797 JCADQ9P266 1359 aa22.44■■□□□ 1.18
EDC3-202ENST00000426797 SHPRHQ149N8 1683 aa22.44■■□□□ 1.18
EDC3-202ENST00000426797 ABCA3Q99758 1704 aa22.43■■□□□ 1.18
EDC3-202ENST00000426797 FAM83GA6ND36 823 aa22.43■■□□□ 1.18
EDC3-202ENST00000426797 NUTM2BA6NNL0 878 aaPredicted RBP22.43■■□□□ 1.18
EDC3-202ENST00000426797 NUTM2EB1AL46 878 aaPredicted RBP22.43■■□□□ 1.18
EDC3-202ENST00000426797 NUTM2AQ8IVF1 878 aaPredicted RBP22.43■■□□□ 1.18
EDC3-202ENST00000426797 IRX6P78412 446 aaPredicted RBP22.41■■□□□ 1.18
EDC3-202ENST00000426797 PELP1Q8IZL8 1130 aaKnown RBP22.41■■□□□ 1.18
EDC3-202ENST00000426797 ADAMTS2O95450 1211 aa22.4■■□□□ 1.18
EDC3-202ENST00000426797 COL18A1P39060 1754 aa22.4■■□□□ 1.18
EDC3-202ENST00000426797 RGPD5Q99666 1765 aa22.4■■□□□ 1.18
EDC3-202ENST00000426797 EYA1Q99502 592 aa22.39■■□□□ 1.17
EDC3-202ENST00000426797 ANKRD24Q8TF21 1146 aa22.38■■□□□ 1.17
EDC3-202ENST00000426797 HMOX1P09601 288 aa22.38■■□□□ 1.17
EDC3-202ENST00000426797 BLMP54132 1417 aaPredicted RBP22.38■■□□□ 1.17
EDC3-202ENST00000426797 CCDC146Q8IYE0 955 aa22.37■■□□□ 1.17
EDC3-202ENST00000426797 ERBB3P21860 1342 aa22.36■■□□□ 1.17
EDC3-202ENST00000426797 NBPF6Q5VWK0 638 aa22.35■■□□□ 1.17
EDC3-202ENST00000426797 NBPF4Q96M43 638 aa22.35■■□□□ 1.17
EDC3-202ENST00000426797 FCHSD2O94868 740 aa22.35■■□□□ 1.17
EDC3-202ENST00000426797 SULT6B1Q6IMI4 303 aa22.35■■□□□ 1.17
EDC3-202ENST00000426797 CAMTA1Q9Y6Y1 1673 aa22.34■■□□□ 1.17
EDC3-202ENST00000426797 SPATA31A6Q5VVP1 1343 aa22.34■■□□□ 1.17
EDC3-202ENST00000426797 AEBP1Q8IUX7 1158 aa22.34■■□□□ 1.17
EDC3-202ENST00000426797 FBXO41Q8TF61 875 aa22.34■■□□□ 1.17
EDC3-202ENST00000426797 BTG4Q9NY30 223 aa22.34■■□□□ 1.17
EDC3-202ENST00000426797 RSPH6AQ9H0K4 717 aa22.33■■□□□ 1.17
EDC3-202ENST00000426797 IGSF1Q8N6C5 1336 aa22.33■■□□□ 1.16
EDC3-202ENST00000426797 PLEKHF1Q96S99 279 aa22.32■■□□□ 1.16
EDC3-202ENST00000426797 USHBP1Q8N6Y0 703 aa22.32■■□□□ 1.16
EDC3-202ENST00000426797 CSB-PGBD3P0DP91 1061 aa22.31■■□□□ 1.16
EDC3-202ENST00000426797 ABCC6O95255 1503 aa22.31■■□□□ 1.16
EDC3-202ENST00000426797 LMO7Q8WWI1 1683 aa22.31■■□□□ 1.16
EDC3-202ENST00000426797 PRKAR2BP31323 418 aa22.3■■□□□ 1.16
EDC3-202ENST00000426797 EVA1CP58658 441 aa22.3■■□□□ 1.16
EDC3-202ENST00000426797 RUNDC1Q96C34 613 aa22.3■■□□□ 1.16
EDC3-202ENST00000426797 RGPD1P0DJD0 1748 aa22.3■■□□□ 1.16
EDC3-202ENST00000426797 STRN4Q9NRL3 753 aa22.3■■□□□ 1.16
EDC3-202ENST00000426797 RGPD2P0DJD1 1756 aa22.3■■□□□ 1.16
EDC3-202ENST00000426797 APAF1O14727 1248 aa22.29■■□□□ 1.16
EDC3-202ENST00000426797 ERICH6BQ5W0A0 696 aa22.29■■□□□ 1.16
EDC3-202ENST00000426797 NLRP2Q9NX02 1062 aa22.29■■□□□ 1.16
EDC3-202ENST00000426797 RNF123Q5XPI4 1314 aa22.29■■□□□ 1.16
EDC3-202ENST00000426797 PNNQ9H307 717 aaKnown RBP22.29■■□□□ 1.16
EDC3-202ENST00000426797 PHACTR3Q96KR7 559 aa22.28■■□□□ 1.16
EDC3-202ENST00000426797 COL5A2P05997 1499 aaPredicted RBP22.28■■□□□ 1.16
EDC3-202ENST00000426797 SALL2Q9Y467 1007 aaPredicted RBP22.27■■□□□ 1.16
EDC3-202ENST00000426797 COL14A1Q05707 1796 aaKnown RBP22.27■■□□□ 1.16
EDC3-202ENST00000426797 LARP1Q6PKG0 1096 aaKnown RBP22.27■■□□□ 1.16
EDC3-202ENST00000426797 WDR17Q8IZU2 1322 aa22.27■■□□□ 1.16
EDC3-202ENST00000426797 KDRP35968 1356 aa22.27■■□□□ 1.16
EDC3-202ENST00000426797 TCP11L2Q8N4U5 519 aa22.26■■□□□ 1.15
EDC3-202ENST00000426797 NGLY1Q96IV0 654 aa22.26■■□□□ 1.15
EDC3-202ENST00000426797 C8orf37Q96NL8 207 aa22.26■■□□□ 1.15
EDC3-202ENST00000426797 TSHZ2Q9NRE2 1034 aa22.26■■□□□ 1.15
EDC3-202ENST00000426797 LRP6O75581 1613 aa22.26■■□□□ 1.15
EDC3-202ENST00000426797 TOM1L2Q6ZVM7 507 aa22.26■■□□□ 1.15
EDC3-202ENST00000426797 MAPK8IP3Q9UPT6 1336 aa22.23■■□□□ 1.15
EDC3-202ENST00000426797 NEUROD2Q15784 382 aa22.23■■□□□ 1.15
EDC3-202ENST00000426797 NEFMP07197 916 aa22.22■■□□□ 1.15
EDC3-202ENST00000426797 RRP7AQ9Y3A4 280 aaKnown RBP22.22■■□□□ 1.15
EDC3-202ENST00000426797 MEX3CQ5U5Q3 659 aaKnown RBP22.21■■□□□ 1.15
EDC3-202ENST00000426797 PPP4R2Q9NY27 417 aa22.21■■□□□ 1.15
EDC3-202ENST00000426797 SLIT2O94813 1529 aa22.2■■□□□ 1.14
EDC3-202ENST00000426797 TMPOP42166 694 aaKnown RBP22.2■■□□□ 1.14
EDC3-202ENST00000426797 FNBP4Q8N3X1 1017 aaPredicted RBP22.2■■□□□ 1.14
EDC3-202ENST00000426797 CARD10Q9BWT7 1032 aa22.2■■□□□ 1.14
EDC3-202ENST00000426797 USP35Q9P2H5 1018 aa22.2■■□□□ 1.14
EDC3-202ENST00000426797 NCAPD2Q15021 1401 aa22.2■■□□□ 1.14
EDC3-202ENST00000426797 PDE3BQ13370 1112 aa22.19■■□□□ 1.14
EDC3-202ENST00000426797 PLCH1Q4KWH8 1693 aa22.19■■□□□ 1.14
EDC3-202ENST00000426797 UNC5CLQ8IV45 518 aa22.18■■□□□ 1.14
EDC3-202ENST00000426797 CDCA7LQ96GN5 454 aa22.18■■□□□ 1.14
EDC3-202ENST00000426797 CRB1P82279 1406 aa22.17■■□□□ 1.14
EDC3-202ENST00000426797 FAM208AQ9UK61 1670 aaKnown RBP22.17■■□□□ 1.14
EDC3-202ENST00000426797 RIPK4P57078 832 aa22.17■■□□□ 1.14
EDC3-202ENST00000426797 MTHFSDQ2M296 383 aaKnown RBP22.17■■□□□ 1.14
EDC3-202ENST00000426797 RAPGEF4Q8WZA2 1011 aa22.16■■□□□ 1.14
EDC3-202ENST00000426797 BCL9LQ86UU0 1499 aa22.16■■□□□ 1.14
EDC3-202ENST00000426797 NFE2L2Q16236 605 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms