RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 RGS22Q8NE09 1264 aa10.42□□□□□ -0.74
SSBP3-207ENST00000426150 IVNS1ABPQ9Y6Y0 642 aa10.42□□□□□ -0.74
SSBP3-207ENST00000426150 USP17L15C9J2P7 530 aa10.41□□□□□ -0.74
SSBP3-207ENST00000426150 USP17L10C9JJH3 530 aa10.41□□□□□ -0.74
SSBP3-207ENST00000426150 USP17L13C9JLJ4 530 aa10.41□□□□□ -0.74
SSBP3-207ENST00000426150 USP17L12C9JPN9 530 aa10.41□□□□□ -0.74
SSBP3-207ENST00000426150 USP17L11C9JVI0 530 aa10.41□□□□□ -0.74
SSBP3-207ENST00000426150 USP17L21D6R901 530 aa10.41□□□□□ -0.74
SSBP3-207ENST00000426150 USP17L18D6R9N7 530 aa10.41□□□□□ -0.74
SSBP3-207ENST00000426150 USP17L22D6RA61 530 aa10.41□□□□□ -0.74
SSBP3-207ENST00000426150 USP17L17D6RBQ6 530 aa10.41□□□□□ -0.74
SSBP3-207ENST00000426150 USP17L19D6RCP7 530 aa10.41□□□□□ -0.74
SSBP3-207ENST00000426150 USP17L20D6RJB6 530 aa10.41□□□□□ -0.74
SSBP3-207ENST00000426150 LZTS3O60299 673 aaPredicted RBP10.41□□□□□ -0.74
SSBP3-207ENST00000426150 USP17L24Q0WX57 530 aa10.41□□□□□ -0.74
SSBP3-207ENST00000426150 B4GALNT3Q6L9W6 998 aa10.41□□□□□ -0.74
SSBP3-207ENST00000426150 SLC6A16Q9GZN6 736 aa10.41□□□□□ -0.74
SSBP3-207ENST00000426150 MYT1LQ9UL68 1186 aa10.41□□□□□ -0.74
SSBP3-207ENST00000426150 ATP5J2-PTCD1G3V325 749 aa10.4□□□□□ -0.74
SSBP3-207ENST00000426150 RASA1P20936 1047 aa10.4□□□□□ -0.74
SSBP3-207ENST00000426150 PTK7Q13308 1070 aa10.4□□□□□ -0.74
SSBP3-207ENST00000426150 MAP7D1Q3KQU3 841 aa10.4□□□□□ -0.74
SSBP3-207ENST00000426150 TJAP1Q5JTD0 557 aa10.4□□□□□ -0.74
SSBP3-207ENST00000426150 ZNF516Q92618 1163 aa10.4□□□□□ -0.74
SSBP3-207ENST00000426150 IL21Q9HBE4 155 aa10.4□□□□□ -0.74
SSBP3-207ENST00000426150 LARP1Q6PKG0 1096 aaKnown RBP10.39□□□□□ -0.75
SSBP3-207ENST00000426150 CARD14Q9BXL6 1004 aa10.39□□□□□ -0.75
SSBP3-207ENST00000426150 MTMR7Q9Y216 660 aa10.39□□□□□ -0.75
SSBP3-207ENST00000426150 TRAF7Q6Q0C0 670 aa10.38□□□□□ -0.75
SSBP3-207ENST00000426150 SH3RF1Q7Z6J0 888 aa10.38□□□□□ -0.75
SSBP3-207ENST00000426150 DZIP3Q86Y13 1208 aaKnown RBP10.38□□□□□ -0.75
SSBP3-207ENST00000426150 MAGEB6P1A0A0J9YX57 407 aa10.37□□□□□ -0.75
SSBP3-207ENST00000426150 EML3Q32P44 896 aa10.37□□□□□ -0.75
SSBP3-207ENST00000426150 GNEQ9Y223 722 aaKnown RBP10.37□□□□□ -0.75
SSBP3-207ENST00000426150 PTPN5P54829 565 aa10.36□□□□□ -0.75
SSBP3-207ENST00000426150 TSGA10IPQ3SY00 556 aa10.36□□□□□ -0.75
SSBP3-207ENST00000426150 BAP1Q92560 729 aa10.36□□□□□ -0.75
SSBP3-207ENST00000426150 LINC01559Q495D7 138 aa10.35□□□□□ -0.75
SSBP3-207ENST00000426150 SND1Q7KZF4 910 aaKnown RBP eCLIP10.35□□□□□ -0.75
SSBP3-207ENST00000426150 BPHLQ86WA6 291 aaPredicted RBP10.35□□□□□ -0.75
SSBP3-207ENST00000426150 ANKMY2Q8IV38 441 aa10.35□□□□□ -0.75
SSBP3-207ENST00000426150 OGFOD1Q8N543 542 aa10.35□□□□□ -0.75
SSBP3-207ENST00000426150 FAM200AQ8TCP9 573 aa10.35□□□□□ -0.75
SSBP3-207ENST00000426150 CCDC85AQ96PX6 553 aaPredicted RBP10.35□□□□□ -0.75
SSBP3-207ENST00000426150 CDCA7Q9BWT1 371 aaPredicted RBP10.35□□□□□ -0.75
SSBP3-207ENST00000426150 S1PR4O95977 384 aa10.34□□□□□ -0.75
SSBP3-207ENST00000426150 FAM69CQ0P6D2 419 aa10.34□□□□□ -0.75
SSBP3-207ENST00000426150 ERFEQ4G0M1 354 aa10.34□□□□□ -0.75
SSBP3-207ENST00000426150 PHLDB3Q6NSJ2 640 aa10.34□□□□□ -0.75
SSBP3-207ENST00000426150 FOXJ1Q92949 421 aa10.34□□□□□ -0.75
SSBP3-207ENST00000426150 DOLKQ9UPQ8 538 aa10.34□□□□□ -0.75
SSBP3-207ENST00000426150 GIGYF1O75420 1035 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-207ENST00000426150 CLDN10P78369 228 aa10.33□□□□□ -0.76
SSBP3-207ENST00000426150 AGERQ15109 404 aa10.33□□□□□ -0.76
SSBP3-207ENST00000426150 C4orf48Q5BLP8 95 aa10.33□□□□□ -0.76
SSBP3-207ENST00000426150 TRIM50Q86XT4 487 aa10.33□□□□□ -0.76
SSBP3-207ENST00000426150 ZNF511Q8NB15 262 aa10.33□□□□□ -0.76
SSBP3-207ENST00000426150 NKX2-3Q8TAU0 364 aa10.33□□□□□ -0.76
SSBP3-207ENST00000426150 SLAIN2Q9P270 581 aa10.33□□□□□ -0.76
SSBP3-207ENST00000426150 NOD1Q9Y239 953 aa10.33□□□□□ -0.76
SSBP3-207ENST00000426150 FCF1Q9Y324 198 aaKnown RBP10.33□□□□□ -0.76
SSBP3-207ENST00000426150 SSFA2P28290 1259 aa10.32□□□□□ -0.76
SSBP3-207ENST00000426150 DPYDQ12882 1025 aa10.32□□□□□ -0.76
SSBP3-207ENST00000426150 CLP1Q92989 425 aaKnown RBP10.32□□□□□ -0.76
SSBP3-207ENST00000426150 ZNF594Q96JF6 807 aaPredicted RBP10.32□□□□□ -0.76
SSBP3-207ENST00000426150 ATP1A2P50993 1020 aa10.31□□□□□ -0.76
SSBP3-207ENST00000426150 CCDC27Q2M243 656 aa10.31□□□□□ -0.76
SSBP3-207ENST00000426150 TXNDC2Q86VQ3 553 aa10.31□□□□□ -0.76
SSBP3-207ENST00000426150 SPNS2Q8IVW8 549 aa10.31□□□□□ -0.76
SSBP3-207ENST00000426150 SLC10A4Q96EP9 437 aa10.31□□□□□ -0.76
SSBP3-207ENST00000426150 DNAAF2Q9NVR5 837 aaKnown RBP10.31□□□□□ -0.76
SSBP3-207ENST00000426150 OXLD1Q5BKU9 147 aa10.3□□□□□ -0.76
SSBP3-207ENST00000426150 RNF20Q5VTR2 975 aa10.3□□□□□ -0.76
SSBP3-207ENST00000426150 FOXD4L5Q5VV16 416 aaPredicted RBP10.3□□□□□ -0.76
SSBP3-207ENST00000426150 LARGE2Q8N3Y3 721 aa10.3□□□□□ -0.76
SSBP3-207ENST00000426150 CCER1Q8TC90 406 aaPredicted RBP10.3□□□□□ -0.76
SSBP3-207ENST00000426150 FOXD4L4Q8WXT5 416 aaPredicted RBP10.3□□□□□ -0.76
SSBP3-207ENST00000426150 C1QTNF2Q9BXJ5 285 aa10.3□□□□□ -0.76
SSBP3-207ENST00000426150 SWI5Q1ZZU3 235 aa10.28□□□□□ -0.76
SSBP3-207ENST00000426150 NBPF20Q3BBV1 942 aa10.28□□□□□ -0.76
SSBP3-207ENST00000426150 PCDH10Q9P2E7 1040 aa10.28□□□□□ -0.76
SSBP3-207ENST00000426150 KIAA1024Q9UPX6 916 aa10.28□□□□□ -0.76
SSBP3-207ENST00000426150 EIF4G1Q04637 1599 aaKnown RBP10.27□□□□□ -0.76
SSBP3-207ENST00000426150 ESPNB1AK53 854 aa10.27□□□□□ -0.77
SSBP3-207ENST00000426150 ZBTB7BO15156 539 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-207ENST00000426150 DKK1O94907 266 aa10.27□□□□□ -0.77
SSBP3-207ENST00000426150 ATP2B4P23634 1241 aa10.27□□□□□ -0.77
SSBP3-207ENST00000426150 ARID4AP29374 1257 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-207ENST00000426150 SH3BP2P78314 561 aa10.27□□□□□ -0.77
SSBP3-207ENST00000426150 GTF2IP78347 998 aa10.27□□□□□ -0.77
SSBP3-207ENST00000426150 SIX5Q8N196 739 aa10.27□□□□□ -0.77
SSBP3-207ENST00000426150 TRMT44Q8IYL2 757 aaKnown RBP10.26□□□□□ -0.77
SSBP3-207ENST00000426150 CDV3Q9UKY7 258 aaKnown RBP10.25□□□□□ -0.77
SSBP3-207ENST00000426150 CCDC102BQ68D86 513 aa10.24□□□□□ -0.77
SSBP3-207ENST00000426150 SEPT12Q8IYM1 358 aa10.24□□□□□ -0.77
SSBP3-207ENST00000426150 PCDHB11Q9Y5F2 797 aa10.24□□□□□ -0.77
SSBP3-207ENST00000426150 PCDHGA11Q9Y5H2 935 aa10.24□□□□□ -0.77
SSBP3-207ENST00000426150 SHROOM4Q9ULL8 1493 aa10.23□□□□□ -0.77
SSBP3-207ENST00000426150 SEC13P55735 322 aa10.23□□□□□ -0.77
SSBP3-207ENST00000426150 CCDC125Q86Z20 511 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms