RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 MYOM1P52179 1685 aa19.75■□□□□ 0.75
VEGFB-202ENST00000426086 ZBTB7AO95365 584 aa19.75■□□□□ 0.75
VEGFB-202ENST00000426086 TOM1L2Q6ZVM7 507 aa19.75■□□□□ 0.75
VEGFB-202ENST00000426086 BCL11BQ9C0K0 894 aaPredicted RBP19.75■□□□□ 0.75
VEGFB-202ENST00000426086 CABP1Q9NZU7 370 aa19.75■□□□□ 0.75
VEGFB-202ENST00000426086 PIK3C2AO00443 1686 aa19.75■□□□□ 0.75
VEGFB-202ENST00000426086 C11orf95C9JLR9 678 aaPredicted RBP19.74■□□□□ 0.75
VEGFB-202ENST00000426086 PTGER2P43116 358 aa19.74■□□□□ 0.75
VEGFB-202ENST00000426086 CENPJQ9HC77 1338 aaPredicted RBP19.74■□□□□ 0.75
VEGFB-202ENST00000426086 RGPD5Q99666 1765 aa19.72■□□□□ 0.75
VEGFB-202ENST00000426086 QRICH2Q9H0J4 1663 aa19.72■□□□□ 0.75
VEGFB-202ENST00000426086 ATF5Q9Y2D1 282 aaPredicted RBP19.72■□□□□ 0.75
VEGFB-202ENST00000426086 WDR17Q8IZU2 1322 aa19.72■□□□□ 0.75
VEGFB-202ENST00000426086 BRD4O60885 1362 aaPredicted RBP19.71■□□□□ 0.75
VEGFB-202ENST00000426086 DCAF8L1A6NGE4 600 aa19.7■□□□□ 0.74
VEGFB-202ENST00000426086 AKAP12Q02952 1782 aa19.7■□□□□ 0.74
VEGFB-202ENST00000426086 BCL9O00512 1426 aa19.69■□□□□ 0.74
VEGFB-202ENST00000426086 CPSF1Q10570 1443 aaKnown RBP19.69■□□□□ 0.74
VEGFB-202ENST00000426086 TXNRD1Q16881 649 aa19.69■□□□□ 0.74
VEGFB-202ENST00000426086 ARHGEF25Q86VW2 580 aa19.68■□□□□ 0.74
VEGFB-202ENST00000426086 SOX12O15370 315 aa19.67■□□□□ 0.74
VEGFB-202ENST00000426086 ZNF784Q8NCA9 323 aaPredicted RBP19.66■□□□□ 0.74
VEGFB-202ENST00000426086 FHDC1Q9C0D6 1143 aaPredicted RBP19.66■□□□□ 0.74
VEGFB-202ENST00000426086 SLC15A2Q16348 729 aa19.65■□□□□ 0.74
VEGFB-202ENST00000426086 SGIP1Q9BQI5 828 aa19.65■□□□□ 0.74
VEGFB-202ENST00000426086 SYT17Q9BSW7 474 aa19.65■□□□□ 0.74
VEGFB-202ENST00000426086 CARD10Q9BWT7 1032 aa19.64■□□□□ 0.73
VEGFB-202ENST00000426086 STK32BQ9NY57 414 aa19.64■□□□□ 0.73
VEGFB-202ENST00000426086 TTC21BQ7Z4L5 1316 aa19.64■□□□□ 0.73
VEGFB-202ENST00000426086 CDCA7Q9BWT1 371 aaPredicted RBP19.63■□□□□ 0.73
VEGFB-202ENST00000426086 NFAT5O94916 1531 aa19.62■□□□□ 0.73
VEGFB-202ENST00000426086 CSB-PGBD3P0DP91 1061 aa19.62■□□□□ 0.73
VEGFB-202ENST00000426086 EXOC5O00471 708 aa19.61■□□□□ 0.73
VEGFB-202ENST00000426086 TRPM1Q7Z4N2 1603 aa19.61■□□□□ 0.73
VEGFB-202ENST00000426086 ACSBG1Q96GR2 724 aa19.6■□□□□ 0.73
VEGFB-202ENST00000426086 TNS2Q63HR2 1409 aa19.59■□□□□ 0.73
VEGFB-202ENST00000426086 NHSQ6T4R5 1651 aa19.59■□□□□ 0.73
VEGFB-202ENST00000426086 PAPPAQ13219 1627 aa19.59■□□□□ 0.73
VEGFB-202ENST00000426086 KCNH5Q8NCM2 988 aa19.59■□□□□ 0.73
VEGFB-202ENST00000426086 MTFR1LQ9H019 292 aa19.59■□□□□ 0.73
VEGFB-202ENST00000426086 EVC2Q86UK5 1308 aa19.58■□□□□ 0.73
VEGFB-202ENST00000426086 CCDC7Q96M83 1385 aa19.57■□□□□ 0.72
VEGFB-202ENST00000426086 ZNF827Q17R98 1081 aa19.56■□□□□ 0.72
VEGFB-202ENST00000426086 L3MBTL2Q969R5 705 aa19.56■□□□□ 0.72
VEGFB-202ENST00000426086 ZNF692Q9BU19 519 aaPredicted RBP19.56■□□□□ 0.72
VEGFB-202ENST00000426086 TTC21AQ8NDW8 1320 aa19.55■□□□□ 0.72
VEGFB-202ENST00000426086 LRRC4BQ9NT99 713 aa19.54■□□□□ 0.72
VEGFB-202ENST00000426086 ABCC6O95255 1503 aa19.54■□□□□ 0.72
VEGFB-202ENST00000426086 BTAF1O14981 1849 aa19.53■□□□□ 0.72
VEGFB-202ENST00000426086 CHD4Q14839 1912 aa19.53■□□□□ 0.72
VEGFB-202ENST00000426086 ARXQ96QS3 562 aa19.53■□□□□ 0.72
VEGFB-202ENST00000426086 KTN1Q86UP2 1357 aaKnown RBP19.52■□□□□ 0.72
VEGFB-202ENST00000426086 ERBB3P21860 1342 aa19.51■□□□□ 0.71
VEGFB-202ENST00000426086 MON2Q7Z3U7 1717 aa19.51■□□□□ 0.71
VEGFB-202ENST00000426086 SENP3-EIF4A1A0A087X0R7 540 aa19.51■□□□□ 0.71
VEGFB-202ENST00000426086 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.51■□□□□ 0.71
VEGFB-202ENST00000426086 C1QTNF8P60827 252 aa19.5■□□□□ 0.71
VEGFB-202ENST00000426086 NME9Q86XW9 330 aa19.5■□□□□ 0.71
VEGFB-202ENST00000426086 NLRP2Q9NX02 1062 aa19.5■□□□□ 0.71
VEGFB-202ENST00000426086 MAP3K5Q99683 1374 aa19.49■□□□□ 0.71
VEGFB-202ENST00000426086 CD163L1Q9NR16 1453 aa19.48■□□□□ 0.71
VEGFB-202ENST00000426086 USP31Q70CQ4 1352 aa19.48■□□□□ 0.71
VEGFB-202ENST00000426086 LTN1O94822 1766 aa19.48■□□□□ 0.71
VEGFB-202ENST00000426086 IL2RBP14784 551 aa19.48■□□□□ 0.71
VEGFB-202ENST00000426086 SIN3AQ96ST3 1273 aa19.48■□□□□ 0.71
VEGFB-202ENST00000426086 USP54Q70EL1 1684 aa19.48■□□□□ 0.71
VEGFB-202ENST00000426086 ROCK2O75116 1388 aaKnown RBP19.46■□□□□ 0.71
VEGFB-202ENST00000426086 SBNO2Q9Y2G9 1366 aa19.46■□□□□ 0.71
VEGFB-202ENST00000426086 KCNQ4P56696 695 aa19.46■□□□□ 0.71
VEGFB-202ENST00000426086 ANKRD24Q8TF21 1146 aa19.46■□□□□ 0.71
VEGFB-202ENST00000426086 AKT1S1Q96B36 256 aa19.46■□□□□ 0.71
VEGFB-202ENST00000426086 PNPLA7Q6ZV29 1317 aa19.44■□□□□ 0.7
VEGFB-202ENST00000426086 TUBGCP6Q96RT7 1819 aa19.44■□□□□ 0.7
VEGFB-202ENST00000426086 COL24A1Q17RW2 1714 aa19.43■□□□□ 0.7
VEGFB-202ENST00000426086 GPR162Q16538 588 aa19.43■□□□□ 0.7
VEGFB-202ENST00000426086 KLHL34Q8N239 644 aa19.43■□□□□ 0.7
VEGFB-202ENST00000426086 KAT6BQ8WYB5 2073 aa19.42■□□□□ 0.7
VEGFB-202ENST00000426086 NLGN2Q8NFZ4 835 aa19.42■□□□□ 0.7
VEGFB-202ENST00000426086 QSER1Q2KHR3 1735 aa19.41■□□□□ 0.7
VEGFB-202ENST00000426086 DDX54Q8TDD1 881 aaKnown RBP19.4■□□□□ 0.7
VEGFB-202ENST00000426086 SLC12A5Q9H2X9 1139 aa19.4■□□□□ 0.7
VEGFB-202ENST00000426086 PELP1Q8IZL8 1130 aaKnown RBP19.39■□□□□ 0.69
VEGFB-202ENST00000426086 UTRNP46939 3433 aa19.39■□□□□ 0.69
VEGFB-202ENST00000426086 SHANK3Q9BYB0 1731 aa19.39■□□□□ 0.69
VEGFB-202ENST00000426086 NEUROD1Q13562 356 aa19.38■□□□□ 0.69
VEGFB-202ENST00000426086 SLC16A10Q8TF71 515 aa19.38■□□□□ 0.69
VEGFB-202ENST00000426086 NSD2O96028 1365 aa19.37■□□□□ 0.69
VEGFB-202ENST00000426086 TMC1Q8TDI8 760 aa19.37■□□□□ 0.69
VEGFB-202ENST00000426086 LTV1Q96GA3 475 aaPredicted RBP19.37■□□□□ 0.69
VEGFB-202ENST00000426086 DOT1LQ8TEK3 1739 aa19.37■□□□□ 0.69
VEGFB-202ENST00000426086 PRIM1P49642 420 aaKnown RBP19.36■□□□□ 0.69
VEGFB-202ENST00000426086 SLC27A3Q5K4L6 730 aa19.36■□□□□ 0.69
VEGFB-202ENST00000426086 A0A1W2PP64 1363 aa19.35■□□□□ 0.69
VEGFB-202ENST00000426086 LY75O60449 1722 aa19.35■□□□□ 0.69
VEGFB-202ENST00000426086 YBX3P16989 372 aaKnown RBP eCLIP19.35■□□□□ 0.696e-9■■□□□ 13.5
VEGFB-202ENST00000426086 FBLN1P23142 703 aa19.35■□□□□ 0.69
VEGFB-202ENST00000426086 IP6K1Q92551 441 aa19.35■□□□□ 0.69
VEGFB-202ENST00000426086 TFCP2L1Q9NZI6 479 aa19.35■□□□□ 0.69
VEGFB-202ENST00000426086 EDC4Q6P2E9 1401 aaKnown RBP19.34■□□□□ 0.69
VEGFB-202ENST00000426086 FAM208AQ9UK61 1670 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms