RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 RGPD1P0DJD0 1748 aa19.92■□□□□ 0.78
ACTB-204ENST00000425660 NFAT5O94916 1531 aa19.91■□□□□ 0.78
ACTB-204ENST00000425660 SOX12O15370 315 aa19.9■□□□□ 0.78
ACTB-204ENST00000425660 RRP1P56182 461 aaKnown RBP19.9■□□□□ 0.78
ACTB-204ENST00000425660 IRX6P78412 446 aaPredicted RBP19.9■□□□□ 0.78
ACTB-204ENST00000425660 NUTM2GQ5VZR2 741 aa19.9■□□□□ 0.78
ACTB-204ENST00000425660 TRIM35Q9UPQ4 493 aa19.9■□□□□ 0.78
ACTB-204ENST00000425660 RTL1A6NKG5 1358 aa19.89■□□□□ 0.78
ACTB-204ENST00000425660 HMOX1P09601 288 aa19.89■□□□□ 0.77
ACTB-204ENST00000425660 NEFMP07197 916 aa19.88■□□□□ 0.77
ACTB-204ENST00000425660 SLIT3O75094 1523 aa19.88■□□□□ 0.77
ACTB-204ENST00000425660 KRT28Q7Z3Y7 464 aa19.88■□□□□ 0.77
ACTB-204ENST00000425660 KCNH5Q8NCM2 988 aa19.88■□□□□ 0.77
ACTB-204ENST00000425660 AMPHP49418 695 aa19.87■□□□□ 0.77
ACTB-204ENST00000425660 PHACTR3Q96KR7 559 aa19.87■□□□□ 0.77
ACTB-204ENST00000425660 ARHGEF10O15013 1369 aa19.87■□□□□ 0.77
ACTB-204ENST00000425660 PHRF1Q9P1Y6 1649 aaKnown RBP19.87■□□□□ 0.77
ACTB-204ENST00000425660 HOXC9P31274 260 aa19.86■□□□□ 0.77
ACTB-204ENST00000425660 RIPK4P57078 832 aa19.86■□□□□ 0.77
ACTB-204ENST00000425660 USP19O94966 1318 aa19.86■□□□□ 0.77
ACTB-204ENST00000425660 IL16Q14005 1332 aa19.86■□□□□ 0.77
ACTB-204ENST00000425660 KDRP35968 1356 aa19.86■□□□□ 0.77
ACTB-204ENST00000425660 NFE2L2Q16236 605 aa19.86■□□□□ 0.77
ACTB-204ENST00000425660 ALS2Q96Q42 1657 aa19.84■□□□□ 0.77
ACTB-204ENST00000425660 XPCQ01831 940 aaPredicted RBP19.84■□□□□ 0.77
ACTB-204ENST00000425660 NPHP3Q7Z494 1330 aa19.84■□□□□ 0.77
ACTB-204ENST00000425660 SULT6B1Q6IMI4 303 aa19.83■□□□□ 0.77
ACTB-204ENST00000425660 MYH16Q9H6N6 1097 aa19.83■□□□□ 0.77
ACTB-204ENST00000425660 IGSF1Q8N6C5 1336 aa19.83■□□□□ 0.77
ACTB-204ENST00000425660 AEBP1Q8IUX7 1158 aa19.82■□□□□ 0.76
ACTB-204ENST00000425660 GCP02774 474 aa19.81■□□□□ 0.76
ACTB-204ENST00000425660 IP6K1Q92551 441 aa19.81■□□□□ 0.76
ACTB-204ENST00000425660 PXDNQ92626 1479 aa19.81■□□□□ 0.76
ACTB-204ENST00000425660 LTN1O94822 1766 aa19.81■□□□□ 0.76
ACTB-204ENST00000425660 PPP4R2Q9NY27 417 aa19.81■□□□□ 0.76
ACTB-204ENST00000425660 EYA1Q99502 592 aa19.8■□□□□ 0.76
ACTB-204ENST00000425660 BRINP3Q76B58 766 aa19.79■□□□□ 0.76
ACTB-204ENST00000425660 ARHGEF25Q86VW2 580 aa19.79■□□□□ 0.76
ACTB-204ENST00000425660 LMOD3Q0VAK6 560 aa19.78■□□□□ 0.76
ACTB-204ENST00000425660 TNS3Q68CZ2 1445 aa19.77■□□□□ 0.76
ACTB-204ENST00000425660 FANCIQ9NVI1 1328 aa19.77■□□□□ 0.76
ACTB-204ENST00000425660 SLAIN2Q9P270 581 aa19.77■□□□□ 0.76
ACTB-204ENST00000425660 CT47B1P0C2W7 299 aaPredicted RBP19.76■□□□□ 0.75
ACTB-204ENST00000425660 CALD1Q05682 793 aaKnown RBP19.76■□□□□ 0.75
ACTB-204ENST00000425660 MED1Q15648 1581 aaPredicted RBP19.76■□□□□ 0.75
ACTB-204ENST00000425660 DDX17Q92841 729 aaKnown RBP19.76■□□□□ 0.75
ACTB-204ENST00000425660 LTBP4Q8N2S1 1624 aa19.76■□□□□ 0.75
ACTB-204ENST00000425660 SPATA31A3Q5VYP0 1347 aa19.74■□□□□ 0.75
ACTB-204ENST00000425660 LMOD2Q6P5Q4 547 aa19.74■□□□□ 0.75
ACTB-204ENST00000425660 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.74■□□□□ 0.75
ACTB-204ENST00000425660 PLIN1O60240 522 aa19.73■□□□□ 0.75
ACTB-204ENST00000425660 DLG5Q8TDM6 1919 aa19.73■□□□□ 0.75
ACTB-204ENST00000425660 TSR2Q969E8 191 aaKnown RBP19.72■□□□□ 0.75
ACTB-204ENST00000425660 SOS2Q07890 1332 aaPredicted RBP19.72■□□□□ 0.75
ACTB-204ENST00000425660 ZNF853P0CG23 659 aa19.72■□□□□ 0.75
ACTB-204ENST00000425660 RARSP54136 660 aaKnown RBP19.72■□□□□ 0.75
ACTB-204ENST00000425660 IFT57Q9NWB7 429 aa19.72■□□□□ 0.75
ACTB-204ENST00000425660 NCAPD2Q15021 1401 aa19.71■□□□□ 0.75
ACTB-204ENST00000425660 BCAR3O75815 825 aa19.7■□□□□ 0.74
ACTB-204ENST00000425660 CRYBG1Q9Y4K1 1723 aa19.69■□□□□ 0.74
ACTB-204ENST00000425660 GNAI1P63096 354 aa19.69■□□□□ 0.74
ACTB-204ENST00000425660 CFAP44Q96MT7 982 aa19.69■□□□□ 0.74
ACTB-204ENST00000425660 THUMPD2Q9BTF0 503 aaKnown RBP19.69■□□□□ 0.74
ACTB-204ENST00000425660 ABCC6O95255 1503 aa19.68■□□□□ 0.74
ACTB-204ENST00000425660 EXOSC9Q06265 439 aaKnown RBP19.68■□□□□ 0.74
ACTB-204ENST00000425660 MTHFSDQ2M296 383 aaKnown RBP19.68■□□□□ 0.74
ACTB-204ENST00000425660 GAS2L2Q8NHY3 880 aa19.68■□□□□ 0.74
ACTB-204ENST00000425660 EXOC6Q8TAG9 804 aa19.68■□□□□ 0.74
ACTB-204ENST00000425660 LTV1Q96GA3 475 aaPredicted RBP19.68■□□□□ 0.74
ACTB-204ENST00000425660 FAM83GA6ND36 823 aa19.67■□□□□ 0.74
ACTB-204ENST00000425660 NBPF6Q5VWK0 638 aa19.67■□□□□ 0.74
ACTB-204ENST00000425660 NBPF4Q96M43 638 aa19.67■□□□□ 0.74
ACTB-204ENST00000425660 C20orf194Q5TEA3 1177 aa19.67■□□□□ 0.74
ACTB-204ENST00000425660 PELP1Q8IZL8 1130 aaKnown RBP19.67■□□□□ 0.74
ACTB-204ENST00000425660 CAMTA1Q9Y6Y1 1673 aa19.66■□□□□ 0.74
ACTB-204ENST00000425660 AXIN2Q9Y2T1 843 aa19.66■□□□□ 0.74
ACTB-204ENST00000425660 CPDO75976 1380 aa19.65■□□□□ 0.74
ACTB-204ENST00000425660 HTATSF1O43719 755 aaKnown RBP19.65■□□□□ 0.74
ACTB-204ENST00000425660 B4GALNT3Q6L9W6 998 aa19.65■□□□□ 0.74
ACTB-204ENST00000425660 NHSL1Q5SYE7 1610 aa19.65■□□□□ 0.74
ACTB-204ENST00000425660 ZNF428Q96B54 188 aa19.65■□□□□ 0.74
ACTB-204ENST00000425660 DCTN1Q14203 1278 aa19.64■□□□□ 0.73
ACTB-204ENST00000425660 PDE3AQ14432 1141 aa19.64■□□□□ 0.73
ACTB-204ENST00000425660 ERBB3P21860 1342 aa19.64■□□□□ 0.73
ACTB-204ENST00000425660 ZC3H6P61129 1189 aaKnown RBP19.63■□□□□ 0.73
ACTB-204ENST00000425660 ANKRD24Q8TF21 1146 aa19.63■□□□□ 0.73
ACTB-204ENST00000425660 CRBNQ96SW2 442 aa19.63■□□□□ 0.73
ACTB-204ENST00000425660 MBIPQ9NS73 344 aa19.63■□□□□ 0.73
ACTB-204ENST00000425660 CRB1P82279 1406 aa19.63■□□□□ 0.73
ACTB-204ENST00000425660 ZBTB7CA1YPR0 619 aa19.62■□□□□ 0.73
ACTB-204ENST00000425660 COL18A1P39060 1754 aa19.62■□□□□ 0.73
ACTB-204ENST00000425660 LMO7Q8WWI1 1683 aa19.62■□□□□ 0.73
ACTB-204ENST00000425660 CHL1O00533 1208 aa19.61■□□□□ 0.73
ACTB-204ENST00000425660 MCM10Q7L590 875 aa19.61■□□□□ 0.73
ACTB-204ENST00000425660 USHBP1Q8N6Y0 703 aa19.61■□□□□ 0.73
ACTB-204ENST00000425660 CERKQ8TCT0 537 aa19.61■□□□□ 0.73
ACTB-204ENST00000425660 CABLES1Q8TDN4 633 aa19.61■□□□□ 0.73
ACTB-204ENST00000425660 CCDC136Q96JN2 1154 aa19.61■□□□□ 0.73
ACTB-204ENST00000425660 LAS1LQ9Y4W2 734 aaKnown RBP19.61■□□□□ 0.73
ACTB-204ENST00000425660 PLEKHG5O94827 1062 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms